Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19015 and CA264_19020 are separated by 589 nucleotides
CA264_19015: CA264_19015 - IS256 family transposase, at 4,420,548 to 4,421,759
_19015
CA264_19020: CA264_19020 - PA-phosphatase, at 4,422,349 to 4,423,152
_19020
Position (kb)
4420
4421
4422 Strain fitness (log2 ratio)
-1
0
1 at 4419.554 kb on + strand at 4419.554 kb on + strand at 4419.554 kb on + strand at 4419.555 kb on - strand at 4419.555 kb on - strand at 4419.607 kb on + strand at 4419.607 kb on + strand at 4419.608 kb on - strand at 4419.608 kb on - strand at 4419.608 kb on - strand at 4419.608 kb on - strand at 4419.613 kb on + strand at 4419.613 kb on + strand at 4419.677 kb on + strand at 4419.678 kb on - strand at 4419.678 kb on - strand at 4419.678 kb on - strand at 4419.678 kb on - strand at 4419.712 kb on + strand at 4419.712 kb on + strand at 4419.737 kb on - strand at 4419.737 kb on - strand at 4419.742 kb on - strand at 4419.790 kb on - strand at 4419.790 kb on - strand at 4419.796 kb on + strand at 4419.797 kb on - strand at 4419.797 kb on - strand at 4419.839 kb on - strand at 4419.873 kb on - strand at 4419.873 kb on - strand at 4419.882 kb on - strand at 4419.882 kb on - strand at 4419.882 kb on - strand at 4419.882 kb on - strand at 4419.886 kb on - strand at 4419.886 kb on - strand at 4419.978 kb on - strand at 4420.011 kb on + strand at 4420.045 kb on - strand at 4420.050 kb on + strand at 4420.051 kb on - strand at 4420.053 kb on - strand at 4420.053 kb on - strand at 4420.057 kb on + strand at 4420.057 kb on + strand at 4420.062 kb on + strand at 4420.062 kb on + strand at 4420.062 kb on + strand at 4420.063 kb on - strand at 4420.063 kb on - strand at 4420.070 kb on + strand at 4420.070 kb on + strand at 4420.108 kb on + strand at 4420.121 kb on + strand at 4420.121 kb on + strand at 4420.121 kb on + strand at 4420.122 kb on - strand at 4420.122 kb on - strand at 4420.122 kb on - strand at 4420.122 kb on - strand at 4420.122 kb on - strand at 4420.122 kb on - strand at 4420.125 kb on + strand at 4420.126 kb on - strand at 4420.141 kb on + strand at 4420.200 kb on - strand at 4420.264 kb on + strand at 4420.280 kb on - strand at 4420.299 kb on + strand at 4420.339 kb on + strand at 4420.351 kb on + strand at 4420.360 kb on + strand at 4420.361 kb on - strand at 4420.363 kb on - strand at 4420.382 kb on - strand at 4420.389 kb on + strand at 4420.390 kb on - strand at 4420.436 kb on + strand at 4420.458 kb on + strand at 4420.480 kb on + strand at 4420.480 kb on + strand at 4420.502 kb on + strand at 4420.654 kb on - strand at 4420.930 kb on - strand, within CA264_19015 at 4420.930 kb on - strand, within CA264_19015 at 4421.055 kb on + strand, within CA264_19015 at 4421.055 kb on + strand, within CA264_19015 at 4421.056 kb on - strand, within CA264_19015 at 4421.056 kb on - strand, within CA264_19015 at 4421.148 kb on + strand, within CA264_19015 at 4421.149 kb on - strand, within CA264_19015 at 4421.149 kb on - strand, within CA264_19015 at 4421.224 kb on + strand, within CA264_19015 at 4421.224 kb on + strand, within CA264_19015 at 4421.225 kb on - strand, within CA264_19015 at 4421.338 kb on - strand, within CA264_19015 at 4421.338 kb on - strand, within CA264_19015 at 4421.514 kb on - strand, within CA264_19015 at 4421.518 kb on - strand, within CA264_19015 at 4421.544 kb on + strand, within CA264_19015 at 4421.545 kb on - strand, within CA264_19015 at 4421.545 kb on - strand, within CA264_19015 at 4421.547 kb on - strand, within CA264_19015 at 4421.643 kb on + strand at 4421.643 kb on + strand at 4421.856 kb on + strand at 4421.919 kb on + strand at 4421.920 kb on - strand at 4421.930 kb on + strand at 4422.099 kb on + strand at 4422.174 kb on + strand at 4422.188 kb on - strand at 4422.194 kb on + strand at 4422.195 kb on - strand at 4422.195 kb on - strand at 4422.209 kb on + strand at 4422.210 kb on - strand at 4422.265 kb on + strand at 4422.266 kb on - strand at 4422.288 kb on - strand at 4422.298 kb on - strand at 4422.307 kb on - strand at 4422.327 kb on - strand at 4422.327 kb on - strand at 4422.334 kb on - strand at 4422.343 kb on - strand at 4422.343 kb on - strand at 4422.343 kb on - strand at 4422.343 kb on - strand at 4422.348 kb on - strand at 4422.350 kb on + strand at 4422.351 kb on - strand at 4422.351 kb on - strand at 4422.351 kb on - strand at 4422.359 kb on + strand at 4422.378 kb on + strand at 4422.401 kb on - strand at 4422.401 kb on - strand at 4422.401 kb on - strand at 4422.402 kb on + strand at 4422.402 kb on + strand at 4422.403 kb on - strand at 4422.403 kb on - strand at 4422.482 kb on - strand, within CA264_19020 at 4422.532 kb on + strand, within CA264_19020 at 4422.570 kb on - strand, within CA264_19020 at 4422.660 kb on - strand, within CA264_19020 at 4422.716 kb on + strand, within CA264_19020
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 4,419,554 + -0.6 4,419,554 + -0.6 4,419,554 + -0.6 4,419,555 - -0.7 4,419,555 - +0.5 4,419,607 + +0.1 4,419,607 + -0.9 4,419,608 - +0.4 4,419,608 - +1.5 4,419,608 - -0.3 4,419,608 - +0.8 4,419,613 + -0.3 4,419,613 + -0.8 4,419,677 + -0.5 4,419,678 - +0.4 4,419,678 - +0.8 4,419,678 - +0.4 4,419,678 - +0.7 4,419,712 + -0.5 4,419,712 + +0.5 4,419,737 - +0.4 4,419,737 - +0.2 4,419,742 - -1.3 4,419,790 - +0.1 4,419,790 - +0.4 4,419,796 + -0.3 4,419,797 - -0.2 4,419,797 - -0.2 4,419,839 - +0.1 4,419,873 - -0.7 4,419,873 - +0.2 4,419,882 - +0.2 4,419,882 - +0.2 4,419,882 - -0.1 4,419,882 - +1.0 4,419,886 - -0.4 4,419,886 - +0.0 4,419,978 - +0.1 4,420,011 + -0.2 4,420,045 - +0.6 4,420,050 + -0.1 4,420,051 - +0.0 4,420,053 - +0.5 4,420,053 - -0.7 4,420,057 + -0.5 4,420,057 + -0.0 4,420,062 + +1.3 4,420,062 + -0.3 4,420,062 + +0.7 4,420,063 - +0.8 4,420,063 - -0.5 4,420,070 + +0.4 4,420,070 + -0.5 4,420,108 + -0.1 4,420,121 + -1.1 4,420,121 + -0.9 4,420,121 + -0.5 4,420,122 - -0.0 4,420,122 - +0.4 4,420,122 - +0.1 4,420,122 - +1.3 4,420,122 - +0.9 4,420,122 - -0.6 4,420,125 + +0.5 4,420,126 - +0.3 4,420,141 + +0.2 4,420,200 - +0.1 4,420,264 + +0.1 4,420,280 - -0.5 4,420,299 + -0.7 4,420,339 + -0.0 4,420,351 + +0.6 4,420,360 + +0.1 4,420,361 - +0.7 4,420,363 - +0.5 4,420,382 - -0.4 4,420,389 + +1.4 4,420,390 - -0.0 4,420,436 + +0.1 4,420,458 + -0.2 4,420,480 + +1.4 4,420,480 + +0.4 4,420,502 + -0.5 4,420,654 - +0.9 4,420,930 - CA264_19015 0.32 +0.2 4,420,930 - CA264_19015 0.32 -0.6 4,421,055 + CA264_19015 0.42 +0.0 4,421,055 + CA264_19015 0.42 -0.5 4,421,056 - CA264_19015 0.42 +0.3 4,421,056 - CA264_19015 0.42 -0.2 4,421,148 + CA264_19015 0.50 +0.2 4,421,149 - CA264_19015 0.50 +0.3 4,421,149 - CA264_19015 0.50 -1.2 4,421,224 + CA264_19015 0.56 -0.1 4,421,224 + CA264_19015 0.56 -0.1 4,421,225 - CA264_19015 0.56 +0.7 4,421,338 - CA264_19015 0.65 +1.7 4,421,338 - CA264_19015 0.65 -0.6 4,421,514 - CA264_19015 0.80 -0.0 4,421,518 - CA264_19015 0.80 -0.4 4,421,544 + CA264_19015 0.82 +0.0 4,421,545 - CA264_19015 0.82 +1.7 4,421,545 - CA264_19015 0.82 +1.7 4,421,547 - CA264_19015 0.82 -0.0 4,421,643 + -1.0 4,421,643 + +0.3 4,421,856 + +0.1 4,421,919 + +0.0 4,421,920 - +0.3 4,421,930 + +0.1 4,422,099 + -0.1 4,422,174 + -0.3 4,422,188 - +0.1 4,422,194 + +1.4 4,422,195 - +0.3 4,422,195 - -0.8 4,422,209 + -0.5 4,422,210 - -0.2 4,422,265 + -0.8 4,422,266 - -0.2 4,422,288 - +0.1 4,422,298 - +1.4 4,422,307 - +0.1 4,422,327 - +0.4 4,422,327 - +1.1 4,422,334 - -0.3 4,422,343 - -0.3 4,422,343 - -0.2 4,422,343 - -1.1 4,422,343 - -0.2 4,422,348 - -0.1 4,422,350 + -0.2 4,422,351 - -0.3 4,422,351 - -0.3 4,422,351 - -1.7 4,422,359 + +0.1 4,422,378 + -0.0 4,422,401 - -0.5 4,422,401 - +1.1 4,422,401 - +0.2 4,422,402 + -0.5 4,422,402 + +0.3 4,422,403 - -0.1 4,422,403 - +0.2 4,422,482 - CA264_19020 0.17 +0.0 4,422,532 + CA264_19020 0.23 -0.1 4,422,570 - CA264_19020 0.27 +1.1 4,422,660 - CA264_19020 0.39 -0.2 4,422,716 + CA264_19020 0.46 +0.6
Or see this region's nucleotide sequence