Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18745 and CA264_18750 are separated by 202 nucleotides CA264_18750 and CA264_18755 are separated by 650 nucleotides
CA264_18745: CA264_18745 - protein sphX, at 4,351,037 to 4,352,032
_18745
CA264_18750: CA264_18750 - FmdC precursor, at 4,352,235 to 4,353,386
_18750
CA264_18755: CA264_18755 - hypothetical protein, at 4,354,037 to 4,355,431
_18755
Position (kb)
4352
4353
4354 Strain fitness (log2 ratio)
-1
0
1
2 at 4351.266 kb on - strand, within CA264_18745 at 4351.266 kb on - strand, within CA264_18745 at 4351.472 kb on + strand, within CA264_18745 at 4351.473 kb on - strand, within CA264_18745 at 4351.486 kb on + strand, within CA264_18745 at 4351.491 kb on + strand, within CA264_18745 at 4351.498 kb on - strand, within CA264_18745 at 4351.658 kb on + strand, within CA264_18745 at 4351.659 kb on - strand, within CA264_18745 at 4351.659 kb on - strand, within CA264_18745 at 4351.664 kb on + strand, within CA264_18745 at 4351.686 kb on - strand, within CA264_18745 at 4351.702 kb on - strand, within CA264_18745 at 4351.769 kb on - strand, within CA264_18745 at 4351.786 kb on + strand, within CA264_18745 at 4351.796 kb on - strand, within CA264_18745 at 4351.857 kb on + strand, within CA264_18745 at 4351.858 kb on - strand, within CA264_18745 at 4351.858 kb on - strand, within CA264_18745 at 4351.883 kb on - strand, within CA264_18745 at 4351.978 kb on + strand at 4352.032 kb on + strand at 4352.032 kb on + strand at 4352.104 kb on + strand at 4352.104 kb on + strand at 4352.105 kb on - strand at 4352.124 kb on - strand at 4352.124 kb on - strand at 4352.152 kb on + strand at 4352.152 kb on + strand at 4352.304 kb on + strand at 4352.341 kb on + strand at 4352.345 kb on + strand at 4352.346 kb on - strand at 4352.346 kb on - strand at 4352.346 kb on - strand at 4352.346 kb on - strand at 4352.346 kb on - strand at 4352.362 kb on + strand, within CA264_18750 at 4352.405 kb on - strand, within CA264_18750 at 4352.414 kb on - strand, within CA264_18750 at 4352.586 kb on - strand, within CA264_18750 at 4352.675 kb on + strand, within CA264_18750 at 4352.741 kb on - strand, within CA264_18750 at 4352.782 kb on - strand, within CA264_18750 at 4352.795 kb on - strand, within CA264_18750 at 4353.069 kb on + strand, within CA264_18750 at 4353.071 kb on + strand, within CA264_18750 at 4353.146 kb on + strand, within CA264_18750 at 4353.147 kb on - strand, within CA264_18750 at 4353.158 kb on + strand, within CA264_18750 at 4353.166 kb on + strand, within CA264_18750 at 4353.167 kb on - strand, within CA264_18750 at 4353.186 kb on - strand, within CA264_18750 at 4353.282 kb on - strand at 4353.367 kb on - strand at 4353.367 kb on - strand at 4353.381 kb on + strand at 4353.381 kb on + strand at 4353.381 kb on + strand at 4353.382 kb on - strand at 4353.382 kb on - strand at 4353.386 kb on + strand at 4353.386 kb on + strand at 4353.405 kb on + strand at 4353.459 kb on + strand at 4353.465 kb on + strand at 4353.466 kb on - strand at 4353.466 kb on - strand at 4353.492 kb on + strand at 4353.505 kb on - strand at 4353.505 kb on - strand at 4353.508 kb on + strand at 4353.508 kb on + strand at 4353.508 kb on + strand at 4353.509 kb on - strand at 4353.509 kb on - strand at 4353.509 kb on - strand at 4353.509 kb on - strand at 4353.509 kb on - strand at 4353.509 kb on - strand at 4353.510 kb on + strand at 4353.510 kb on + strand at 4353.510 kb on + strand at 4353.511 kb on - strand at 4353.511 kb on - strand at 4353.511 kb on - strand at 4353.561 kb on + strand at 4353.596 kb on + strand at 4353.643 kb on + strand at 4353.650 kb on - strand at 4353.675 kb on - strand at 4353.731 kb on - strand at 4353.832 kb on + strand at 4353.833 kb on - strand at 4353.833 kb on - strand at 4353.854 kb on + strand at 4353.865 kb on + strand at 4353.897 kb on - strand at 4353.907 kb on + strand at 4353.918 kb on + strand at 4353.933 kb on - strand at 4353.965 kb on - strand at 4354.021 kb on + strand at 4354.022 kb on - strand at 4354.167 kb on + strand at 4354.186 kb on + strand, within CA264_18755 at 4354.295 kb on - strand, within CA264_18755 at 4354.382 kb on - strand, within CA264_18755
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 4,351,266 - CA264_18745 0.23 -0.1 4,351,266 - CA264_18745 0.23 +0.1 4,351,472 + CA264_18745 0.44 +0.2 4,351,473 - CA264_18745 0.44 -0.3 4,351,486 + CA264_18745 0.45 +0.1 4,351,491 + CA264_18745 0.46 -0.6 4,351,498 - CA264_18745 0.46 -0.1 4,351,658 + CA264_18745 0.62 -0.1 4,351,659 - CA264_18745 0.62 +0.5 4,351,659 - CA264_18745 0.62 -1.1 4,351,664 + CA264_18745 0.63 -0.9 4,351,686 - CA264_18745 0.65 +0.1 4,351,702 - CA264_18745 0.67 +0.4 4,351,769 - CA264_18745 0.73 +0.3 4,351,786 + CA264_18745 0.75 +0.1 4,351,796 - CA264_18745 0.76 -0.7 4,351,857 + CA264_18745 0.82 -0.6 4,351,858 - CA264_18745 0.82 -1.0 4,351,858 - CA264_18745 0.82 -0.2 4,351,883 - CA264_18745 0.85 -0.6 4,351,978 + -0.8 4,352,032 + +2.3 4,352,032 + +0.1 4,352,104 + +0.1 4,352,104 + -0.8 4,352,105 - -0.4 4,352,124 - -1.0 4,352,124 - -0.5 4,352,152 + -0.2 4,352,152 + -0.0 4,352,304 + -0.1 4,352,341 + +0.1 4,352,345 + +0.2 4,352,346 - -0.2 4,352,346 - +0.4 4,352,346 - -0.3 4,352,346 - -1.7 4,352,346 - -1.2 4,352,362 + CA264_18750 0.11 +0.4 4,352,405 - CA264_18750 0.15 -0.1 4,352,414 - CA264_18750 0.16 -0.2 4,352,586 - CA264_18750 0.30 -0.8 4,352,675 + CA264_18750 0.38 +0.3 4,352,741 - CA264_18750 0.44 -0.6 4,352,782 - CA264_18750 0.47 -0.7 4,352,795 - CA264_18750 0.49 -0.4 4,353,069 + CA264_18750 0.72 +0.1 4,353,071 + CA264_18750 0.73 -1.6 4,353,146 + CA264_18750 0.79 +0.4 4,353,147 - CA264_18750 0.79 +0.2 4,353,158 + CA264_18750 0.80 +0.6 4,353,166 + CA264_18750 0.81 -0.1 4,353,167 - CA264_18750 0.81 +1.2 4,353,186 - CA264_18750 0.83 +1.1 4,353,282 - -0.1 4,353,367 - +0.0 4,353,367 - +0.1 4,353,381 + +0.0 4,353,381 + -0.3 4,353,381 + -0.1 4,353,382 - -0.1 4,353,382 - -1.1 4,353,386 + +0.0 4,353,386 + +0.2 4,353,405 + -1.0 4,353,459 + +0.3 4,353,465 + -1.6 4,353,466 - -0.1 4,353,466 - +0.6 4,353,492 + -1.0 4,353,505 - -0.4 4,353,505 - +0.1 4,353,508 + +0.5 4,353,508 + -0.6 4,353,508 + +0.2 4,353,509 - -0.4 4,353,509 - -0.3 4,353,509 - +0.8 4,353,509 - +0.9 4,353,509 - -1.1 4,353,509 - -1.0 4,353,510 + -0.1 4,353,510 + -0.0 4,353,510 + +0.9 4,353,511 - +0.8 4,353,511 - -0.4 4,353,511 - +0.4 4,353,561 + -1.2 4,353,596 + +0.3 4,353,643 + -0.1 4,353,650 - -0.4 4,353,675 - -0.4 4,353,731 - +0.3 4,353,832 + -0.3 4,353,833 - -1.6 4,353,833 - +1.3 4,353,854 + +0.5 4,353,865 + -0.5 4,353,897 - +0.1 4,353,907 + +0.0 4,353,918 + +0.7 4,353,933 - +0.2 4,353,965 - +1.3 4,354,021 + -0.6 4,354,022 - +0.1 4,354,167 + +0.1 4,354,186 + CA264_18755 0.11 +2.0 4,354,295 - CA264_18755 0.18 -0.4 4,354,382 - CA264_18755 0.25 +0.4
Or see this region's nucleotide sequence