Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17485 and CA264_17490 are separated by 158 nucleotides CA264_17490 and CA264_17495 are separated by 156 nucleotides CA264_17495 and CA264_17500 are separated by 360 nucleotides CA264_17500 and CA264_17505 are separated by 12 nucleotides
CA264_17485: CA264_17485 - cytochrome C biosynthesis protein, at 4,074,754 to 4,075,473
_17485
CA264_17490: CA264_17490 - 6,7-dimethyl-8-ribityllumazine synthase, at 4,075,632 to 4,076,108
_17490
CA264_17495: CA264_17495 - hypothetical protein, at 4,076,265 to 4,076,855
_17495
CA264_17500: CA264_17500 - molecular chaperone DnaK, at 4,077,216 to 4,077,605
_17500
CA264_17505: CA264_17505 - SMC-Scp complex subunit ScpB, at 4,077,618 to 4,078,181
_17505
Position (kb)
4076
4077 Strain fitness (log2 ratio)
-2
-1
0
1 at 4075.390 kb on + strand, within CA264_17485 at 4075.427 kb on - strand at 4075.427 kb on - strand at 4075.429 kb on - strand at 4075.472 kb on - strand at 4075.493 kb on + strand at 4075.494 kb on - strand at 4075.494 kb on - strand at 4075.578 kb on - strand at 4075.646 kb on - strand at 4076.136 kb on + strand at 4076.140 kb on + strand at 4076.184 kb on - strand at 4076.364 kb on - strand, within CA264_17495 at 4076.369 kb on + strand, within CA264_17495 at 4076.485 kb on + strand, within CA264_17495 at 4076.485 kb on + strand, within CA264_17495 at 4076.512 kb on - strand, within CA264_17495 at 4076.522 kb on + strand, within CA264_17495 at 4076.525 kb on - strand, within CA264_17495 at 4076.590 kb on + strand, within CA264_17495 at 4076.590 kb on + strand, within CA264_17495 at 4076.590 kb on + strand, within CA264_17495 at 4076.593 kb on + strand, within CA264_17495 at 4076.639 kb on + strand, within CA264_17495 at 4076.639 kb on + strand, within CA264_17495 at 4076.640 kb on - strand, within CA264_17495 at 4076.640 kb on - strand, within CA264_17495 at 4076.641 kb on + strand, within CA264_17495 at 4076.642 kb on - strand, within CA264_17495 at 4076.642 kb on - strand, within CA264_17495 at 4076.838 kb on + strand at 4076.855 kb on + strand at 4076.867 kb on - strand at 4076.873 kb on + strand at 4076.878 kb on - strand at 4076.917 kb on + strand at 4076.954 kb on - strand at 4076.961 kb on - strand at 4076.961 kb on - strand at 4076.989 kb on - strand at 4077.002 kb on - strand at 4077.067 kb on + strand at 4077.103 kb on - strand at 4077.107 kb on + strand at 4077.108 kb on - strand at 4077.112 kb on - strand at 4077.112 kb on - strand at 4077.112 kb on - strand at 4077.127 kb on + strand at 4077.188 kb on - strand at 4077.204 kb on + strand at 4077.204 kb on + strand at 4077.205 kb on - strand at 4077.208 kb on - strand at 4077.214 kb on + strand at 4077.215 kb on - strand at 4077.215 kb on - strand at 4077.215 kb on - strand at 4077.221 kb on + strand at 4077.314 kb on - strand, within CA264_17500 at 4077.502 kb on - strand, within CA264_17500 at 4077.517 kb on + strand, within CA264_17500 at 4077.596 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 4,075,390 + CA264_17485 0.88 -1.3 4,075,427 - +0.2 4,075,427 - +0.7 4,075,429 - -0.5 4,075,472 - +0.6 4,075,493 + -1.4 4,075,494 - +1.7 4,075,494 - +0.3 4,075,578 - +0.3 4,075,646 - +0.3 4,076,136 + -0.9 4,076,140 + -1.0 4,076,184 - +1.3 4,076,364 - CA264_17495 0.17 -0.0 4,076,369 + CA264_17495 0.18 -1.0 4,076,485 + CA264_17495 0.37 -0.8 4,076,485 + CA264_17495 0.37 -0.2 4,076,512 - CA264_17495 0.42 +0.7 4,076,522 + CA264_17495 0.43 +0.2 4,076,525 - CA264_17495 0.44 +0.6 4,076,590 + CA264_17495 0.55 -0.1 4,076,590 + CA264_17495 0.55 -1.8 4,076,590 + CA264_17495 0.55 +0.0 4,076,593 + CA264_17495 0.55 -0.1 4,076,639 + CA264_17495 0.63 +0.5 4,076,639 + CA264_17495 0.63 +1.5 4,076,640 - CA264_17495 0.63 -0.7 4,076,640 - CA264_17495 0.63 -0.6 4,076,641 + CA264_17495 0.64 +0.1 4,076,642 - CA264_17495 0.64 +0.3 4,076,642 - CA264_17495 0.64 +1.0 4,076,838 + -1.5 4,076,855 + -0.5 4,076,867 - +0.1 4,076,873 + +0.4 4,076,878 - -0.7 4,076,917 + -0.3 4,076,954 - +0.2 4,076,961 - +0.1 4,076,961 - -1.0 4,076,989 - +0.2 4,077,002 - +0.9 4,077,067 + -0.7 4,077,103 - +0.2 4,077,107 + -0.3 4,077,108 - -0.9 4,077,112 - -0.8 4,077,112 - -0.5 4,077,112 - -1.4 4,077,127 + +0.1 4,077,188 - +0.1 4,077,204 + +0.3 4,077,204 + -0.8 4,077,205 - -1.5 4,077,208 - -0.1 4,077,214 + +0.2 4,077,215 - -0.4 4,077,215 - -0.4 4,077,215 - -0.6 4,077,221 + +0.2 4,077,314 - CA264_17500 0.25 -0.4 4,077,502 - CA264_17500 0.73 -0.3 4,077,517 + CA264_17500 0.77 +0.3 4,077,596 + +0.5
Or see this region's nucleotide sequence