Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17015 and CA264_17020 are separated by 132 nucleotides CA264_17020 and CA264_17025 are separated by 24 nucleotides CA264_17025 and CA264_17030 are separated by 265 nucleotides
CA264_17015: CA264_17015 - ABC transporter permease, at 3,960,120 to 3,961,343
_17015
CA264_17020: CA264_17020 - methyltransferase type 11, at 3,961,476 to 3,962,285
_17020
CA264_17025: CA264_17025 - ribosome-binding factor A, at 3,962,310 to 3,962,705
_17025
CA264_17030: CA264_17030 - hypothetical protein, at 3,962,971 to 3,964,329
_17030
Position (kb)
3961
3962
3963 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3961.437 kb on - strand at 3961.442 kb on - strand at 3961.450 kb on + strand at 3961.468 kb on + strand at 3961.469 kb on - strand at 3961.473 kb on + strand at 3961.473 kb on + strand at 3961.474 kb on - strand at 3961.474 kb on - strand at 3961.474 kb on - strand at 3961.474 kb on - strand at 3961.474 kb on - strand at 3961.491 kb on + strand at 3961.554 kb on - strand at 3961.574 kb on - strand, within CA264_17020 at 3961.577 kb on - strand, within CA264_17020 at 3961.672 kb on + strand, within CA264_17020 at 3961.698 kb on - strand, within CA264_17020 at 3961.741 kb on + strand, within CA264_17020 at 3961.742 kb on - strand, within CA264_17020 at 3961.890 kb on + strand, within CA264_17020 at 3961.917 kb on + strand, within CA264_17020 at 3961.951 kb on - strand, within CA264_17020 at 3961.981 kb on + strand, within CA264_17020 at 3962.000 kb on + strand, within CA264_17020 at 3962.080 kb on + strand, within CA264_17020 at 3962.081 kb on - strand, within CA264_17020 at 3962.084 kb on - strand, within CA264_17020 at 3962.089 kb on + strand, within CA264_17020 at 3962.090 kb on - strand, within CA264_17020 at 3962.270 kb on + strand at 3962.304 kb on + strand at 3962.312 kb on - strand at 3962.323 kb on + strand at 3962.324 kb on - strand at 3962.724 kb on + strand at 3962.728 kb on - strand at 3962.900 kb on + strand at 3962.900 kb on + strand at 3962.904 kb on + strand at 3962.904 kb on + strand at 3962.904 kb on + strand at 3962.904 kb on + strand at 3962.904 kb on + strand at 3962.905 kb on - strand at 3962.935 kb on - strand at 3962.946 kb on + strand at 3962.951 kb on + strand at 3962.954 kb on + strand at 3962.955 kb on - strand at 3962.955 kb on - strand at 3963.023 kb on + strand at 3963.082 kb on + strand at 3963.103 kb on + strand at 3963.104 kb on - strand at 3963.173 kb on + strand, within CA264_17030 at 3963.174 kb on - strand, within CA264_17030 at 3963.225 kb on - strand, within CA264_17030 at 3963.269 kb on - strand, within CA264_17030
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 3,961,437 - -1.2 3,961,442 - -1.7 3,961,450 + -0.2 3,961,468 + +0.6 3,961,469 - -0.4 3,961,473 + -0.4 3,961,473 + -2.3 3,961,474 - +0.2 3,961,474 - -0.4 3,961,474 - -0.4 3,961,474 - +0.7 3,961,474 - -1.1 3,961,491 + -0.6 3,961,554 - -1.0 3,961,574 - CA264_17020 0.12 +2.0 3,961,577 - CA264_17020 0.12 +1.7 3,961,672 + CA264_17020 0.24 -1.4 3,961,698 - CA264_17020 0.27 -1.1 3,961,741 + CA264_17020 0.33 -1.2 3,961,742 - CA264_17020 0.33 +0.3 3,961,890 + CA264_17020 0.51 -1.0 3,961,917 + CA264_17020 0.54 -0.6 3,961,951 - CA264_17020 0.59 -0.5 3,961,981 + CA264_17020 0.62 +0.1 3,962,000 + CA264_17020 0.65 +0.4 3,962,080 + CA264_17020 0.75 -0.4 3,962,081 - CA264_17020 0.75 -2.1 3,962,084 - CA264_17020 0.75 -1.0 3,962,089 + CA264_17020 0.76 -1.9 3,962,090 - CA264_17020 0.76 -1.6 3,962,270 + +0.7 3,962,304 + +0.2 3,962,312 - +0.9 3,962,323 + +2.1 3,962,324 - -0.5 3,962,724 + -2.2 3,962,728 - -0.7 3,962,900 + -0.2 3,962,900 + -0.6 3,962,904 + -0.9 3,962,904 + -0.1 3,962,904 + +0.5 3,962,904 + -0.4 3,962,904 + -0.6 3,962,905 - +1.1 3,962,935 - -0.1 3,962,946 + -0.3 3,962,951 + -0.9 3,962,954 + -0.6 3,962,955 - -0.6 3,962,955 - -1.0 3,963,023 + +0.1 3,963,082 + -0.7 3,963,103 + -1.6 3,963,104 - -1.2 3,963,173 + CA264_17030 0.15 -1.2 3,963,174 - CA264_17030 0.15 -1.0 3,963,225 - CA264_17030 0.19 +2.0 3,963,269 - CA264_17030 0.22 -1.0
Or see this region's nucleotide sequence