Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13080 and CA264_13085 are separated by 370 nucleotides CA264_13085 and CA264_13090 are separated by 92 nucleotides
CA264_13080: CA264_13080 - aminodeoxychorismate lyase, at 3,049,506 to 3,050,582
_13080
CA264_13085: CA264_13085 - methylmalonyl-CoA carboxyltransferase, at 3,050,953 to 3,052,512
_13085
CA264_13090: CA264_13090 - peptidase M42, at 3,052,605 to 3,053,675
_13090
Position (kb)
3050
3051
3052
3053 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3049.981 kb on + strand, within CA264_13080 at 3050.587 kb on + strand at 3050.587 kb on + strand at 3050.587 kb on + strand at 3050.587 kb on + strand at 3050.588 kb on - strand at 3050.607 kb on + strand at 3050.608 kb on - strand at 3050.608 kb on - strand at 3050.608 kb on - strand at 3050.608 kb on - strand at 3050.611 kb on + strand at 3050.611 kb on + strand at 3050.611 kb on + strand at 3050.611 kb on + strand at 3050.612 kb on - strand at 3050.612 kb on - strand at 3050.612 kb on - strand at 3050.661 kb on + strand at 3050.665 kb on + strand at 3050.853 kb on + strand at 3050.853 kb on + strand at 3050.854 kb on - strand at 3050.856 kb on - strand at 3050.856 kb on - strand at 3050.856 kb on - strand at 3050.903 kb on + strand at 3050.924 kb on + strand at 3051.081 kb on + strand at 3051.081 kb on + strand at 3051.119 kb on + strand, within CA264_13085 at 3051.119 kb on + strand, within CA264_13085 at 3051.120 kb on - strand, within CA264_13085 at 3051.123 kb on + strand, within CA264_13085 at 3051.124 kb on - strand, within CA264_13085 at 3051.124 kb on - strand, within CA264_13085 at 3051.169 kb on + strand, within CA264_13085 at 3051.169 kb on + strand, within CA264_13085 at 3051.227 kb on - strand, within CA264_13085 at 3051.483 kb on - strand, within CA264_13085 at 3051.484 kb on + strand, within CA264_13085 at 3051.484 kb on + strand, within CA264_13085 at 3051.508 kb on - strand, within CA264_13085 at 3051.532 kb on + strand, within CA264_13085 at 3051.533 kb on - strand, within CA264_13085 at 3051.533 kb on - strand, within CA264_13085 at 3051.533 kb on - strand, within CA264_13085 at 3051.533 kb on - strand, within CA264_13085 at 3051.534 kb on + strand, within CA264_13085 at 3051.534 kb on + strand, within CA264_13085 at 3051.534 kb on + strand, within CA264_13085 at 3051.535 kb on - strand, within CA264_13085 at 3051.586 kb on - strand, within CA264_13085 at 3051.677 kb on - strand, within CA264_13085 at 3051.698 kb on - strand, within CA264_13085 at 3051.809 kb on - strand, within CA264_13085 at 3051.928 kb on - strand, within CA264_13085 at 3051.932 kb on + strand, within CA264_13085 at 3051.933 kb on - strand, within CA264_13085 at 3051.933 kb on - strand, within CA264_13085 at 3051.933 kb on - strand, within CA264_13085 at 3052.020 kb on + strand, within CA264_13085 at 3052.020 kb on + strand, within CA264_13085 at 3052.171 kb on + strand, within CA264_13085 at 3052.287 kb on + strand, within CA264_13085 at 3052.372 kb on + strand at 3052.449 kb on + strand at 3052.450 kb on - strand at 3052.486 kb on - strand at 3052.516 kb on + strand at 3052.520 kb on + strand at 3052.520 kb on + strand at 3052.521 kb on - strand at 3052.521 kb on - strand at 3052.527 kb on + strand at 3052.571 kb on - strand at 3052.571 kb on - strand at 3052.698 kb on + strand at 3052.710 kb on + strand at 3052.737 kb on + strand, within CA264_13090 at 3052.776 kb on + strand, within CA264_13090 at 3052.778 kb on + strand, within CA264_13090 at 3052.778 kb on + strand, within CA264_13090 at 3052.779 kb on - strand, within CA264_13090 at 3052.783 kb on + strand, within CA264_13090 at 3052.784 kb on - strand, within CA264_13090 at 3052.784 kb on - strand, within CA264_13090 at 3052.784 kb on - strand, within CA264_13090 at 3052.828 kb on - strand, within CA264_13090 at 3052.828 kb on - strand, within CA264_13090 at 3052.845 kb on + strand, within CA264_13090 at 3052.846 kb on - strand, within CA264_13090 at 3053.042 kb on - strand, within CA264_13090 at 3053.042 kb on - strand, within CA264_13090 at 3053.071 kb on + strand, within CA264_13090 at 3053.112 kb on + strand, within CA264_13090 at 3053.112 kb on + strand, within CA264_13090 at 3053.112 kb on + strand, within CA264_13090 at 3053.115 kb on + strand, within CA264_13090 at 3053.115 kb on + strand, within CA264_13090 at 3053.116 kb on - strand, within CA264_13090 at 3053.116 kb on - strand, within CA264_13090 at 3053.116 kb on - strand, within CA264_13090 at 3053.116 kb on - strand, within CA264_13090 at 3053.214 kb on + strand, within CA264_13090 at 3053.215 kb on - strand, within CA264_13090 at 3053.215 kb on - strand, within CA264_13090 at 3053.222 kb on - strand, within CA264_13090 at 3053.308 kb on + strand, within CA264_13090
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 3,049,981 + CA264_13080 0.44 -0.3 3,050,587 + +0.7 3,050,587 + -0.7 3,050,587 + -0.2 3,050,587 + +0.2 3,050,588 - +2.0 3,050,607 + -0.3 3,050,608 - -0.2 3,050,608 - -0.2 3,050,608 - +1.1 3,050,608 - -0.3 3,050,611 + +0.9 3,050,611 + +0.5 3,050,611 + +0.4 3,050,611 + -0.1 3,050,612 - +1.2 3,050,612 - -0.7 3,050,612 - -0.1 3,050,661 + +0.0 3,050,665 + +0.0 3,050,853 + -0.2 3,050,853 + -0.2 3,050,854 - -0.3 3,050,856 - -0.7 3,050,856 - +0.1 3,050,856 - -0.6 3,050,903 + -0.1 3,050,924 + +0.3 3,051,081 + -0.6 3,051,081 + +0.8 3,051,119 + CA264_13085 0.11 +1.5 3,051,119 + CA264_13085 0.11 +0.1 3,051,120 - CA264_13085 0.11 +0.8 3,051,123 + CA264_13085 0.11 +0.7 3,051,124 - CA264_13085 0.11 -0.1 3,051,124 - CA264_13085 0.11 +1.3 3,051,169 + CA264_13085 0.14 +0.3 3,051,169 + CA264_13085 0.14 +1.1 3,051,227 - CA264_13085 0.18 -0.9 3,051,483 - CA264_13085 0.34 +0.3 3,051,484 + CA264_13085 0.34 +0.2 3,051,484 + CA264_13085 0.34 -0.6 3,051,508 - CA264_13085 0.36 +0.0 3,051,532 + CA264_13085 0.37 -0.4 3,051,533 - CA264_13085 0.37 +0.2 3,051,533 - CA264_13085 0.37 -0.0 3,051,533 - CA264_13085 0.37 +1.3 3,051,533 - CA264_13085 0.37 -0.4 3,051,534 + CA264_13085 0.37 +1.2 3,051,534 + CA264_13085 0.37 +0.0 3,051,534 + CA264_13085 0.37 -0.3 3,051,535 - CA264_13085 0.37 +0.1 3,051,586 - CA264_13085 0.41 -1.5 3,051,677 - CA264_13085 0.46 +0.2 3,051,698 - CA264_13085 0.48 -0.0 3,051,809 - CA264_13085 0.55 +0.2 3,051,928 - CA264_13085 0.62 +0.6 3,051,932 + CA264_13085 0.63 +1.5 3,051,933 - CA264_13085 0.63 +0.0 3,051,933 - CA264_13085 0.63 +1.1 3,051,933 - CA264_13085 0.63 +1.2 3,052,020 + CA264_13085 0.68 -0.6 3,052,020 + CA264_13085 0.68 -0.2 3,052,171 + CA264_13085 0.78 +0.9 3,052,287 + CA264_13085 0.86 -0.8 3,052,372 + -0.6 3,052,449 + -0.2 3,052,450 - -0.6 3,052,486 - -0.6 3,052,516 + -0.0 3,052,520 + +0.2 3,052,520 + -0.3 3,052,521 - -1.2 3,052,521 - -0.4 3,052,527 + -0.2 3,052,571 - +1.4 3,052,571 - -0.5 3,052,698 + -0.6 3,052,710 + +0.3 3,052,737 + CA264_13090 0.12 -0.2 3,052,776 + CA264_13090 0.16 +0.5 3,052,778 + CA264_13090 0.16 -1.3 3,052,778 + CA264_13090 0.16 -0.9 3,052,779 - CA264_13090 0.16 -0.0 3,052,783 + CA264_13090 0.17 +0.5 3,052,784 - CA264_13090 0.17 -0.3 3,052,784 - CA264_13090 0.17 +0.4 3,052,784 - CA264_13090 0.17 -0.6 3,052,828 - CA264_13090 0.21 +0.1 3,052,828 - CA264_13090 0.21 +0.1 3,052,845 + CA264_13090 0.22 +0.0 3,052,846 - CA264_13090 0.23 +1.3 3,053,042 - CA264_13090 0.41 +1.2 3,053,042 - CA264_13090 0.41 -0.3 3,053,071 + CA264_13090 0.44 +0.2 3,053,112 + CA264_13090 0.47 -0.9 3,053,112 + CA264_13090 0.47 +0.4 3,053,112 + CA264_13090 0.47 +0.9 3,053,115 + CA264_13090 0.48 -2.1 3,053,115 + CA264_13090 0.48 +0.2 3,053,116 - CA264_13090 0.48 -0.3 3,053,116 - CA264_13090 0.48 -0.2 3,053,116 - CA264_13090 0.48 +0.1 3,053,116 - CA264_13090 0.48 -1.6 3,053,214 + CA264_13090 0.57 -0.1 3,053,215 - CA264_13090 0.57 -0.3 3,053,215 - CA264_13090 0.57 -0.8 3,053,222 - CA264_13090 0.58 +0.2 3,053,308 + CA264_13090 0.66 -0.2
Or see this region's nucleotide sequence