Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09695 and CA264_09700 are separated by 132 nucleotides CA264_09700 and CA264_09705 are separated by 457 nucleotides
CA264_09695: CA264_09695 - integrase, at 2,252,497 to 2,253,924
_09695
CA264_09700: CA264_09700 - hypothetical protein, at 2,254,057 to 2,254,311
_09700
CA264_09705: CA264_09705 - NAD-dependent dehydratase, at 2,254,769 to 2,255,836
_09705
Position (kb)
2254
2255 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2253.064 kb on + strand, within CA264_09695 at 2253.070 kb on + strand, within CA264_09695 at 2253.070 kb on + strand, within CA264_09695 at 2253.102 kb on - strand, within CA264_09695 at 2253.130 kb on + strand, within CA264_09695 at 2253.130 kb on + strand, within CA264_09695 at 2253.130 kb on + strand, within CA264_09695 at 2253.133 kb on - strand, within CA264_09695 at 2253.177 kb on - strand, within CA264_09695 at 2253.231 kb on + strand, within CA264_09695 at 2253.232 kb on - strand, within CA264_09695 at 2253.266 kb on + strand, within CA264_09695 at 2253.291 kb on - strand, within CA264_09695 at 2253.291 kb on - strand, within CA264_09695 at 2253.338 kb on + strand, within CA264_09695 at 2253.339 kb on - strand, within CA264_09695 at 2253.513 kb on + strand, within CA264_09695 at 2253.513 kb on + strand, within CA264_09695 at 2253.513 kb on + strand, within CA264_09695 at 2253.513 kb on + strand, within CA264_09695 at 2253.514 kb on - strand, within CA264_09695 at 2253.517 kb on + strand, within CA264_09695 at 2253.517 kb on + strand, within CA264_09695 at 2253.517 kb on + strand, within CA264_09695 at 2253.518 kb on - strand, within CA264_09695 at 2253.541 kb on - strand, within CA264_09695 at 2253.543 kb on - strand, within CA264_09695 at 2253.543 kb on - strand, within CA264_09695 at 2253.557 kb on + strand, within CA264_09695 at 2253.831 kb on + strand at 2253.924 kb on + strand at 2253.955 kb on + strand at 2253.955 kb on + strand at 2253.956 kb on - strand at 2253.957 kb on + strand at 2253.957 kb on + strand at 2253.957 kb on + strand at 2253.958 kb on - strand at 2253.991 kb on - strand at 2254.012 kb on - strand at 2254.022 kb on - strand at 2254.032 kb on - strand at 2254.032 kb on - strand at 2254.051 kb on + strand at 2254.051 kb on + strand at 2254.052 kb on - strand at 2254.052 kb on - strand at 2254.052 kb on - strand at 2254.052 kb on - strand at 2254.056 kb on + strand at 2254.057 kb on - strand at 2254.276 kb on + strand, within CA264_09700 at 2254.277 kb on - strand, within CA264_09700 at 2254.344 kb on + strand at 2254.356 kb on + strand at 2254.362 kb on + strand at 2254.369 kb on - strand at 2254.369 kb on - strand at 2254.416 kb on + strand at 2254.416 kb on + strand at 2254.416 kb on + strand at 2254.417 kb on - strand at 2254.417 kb on - strand at 2254.491 kb on - strand at 2254.523 kb on + strand at 2254.542 kb on - strand at 2254.544 kb on + strand at 2254.688 kb on + strand at 2254.688 kb on + strand at 2254.743 kb on + strand at 2254.744 kb on - strand at 2254.888 kb on + strand, within CA264_09705 at 2255.098 kb on - strand, within CA264_09705
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 2,253,064 + CA264_09695 0.40 -0.4 2,253,070 + CA264_09695 0.40 +0.0 2,253,070 + CA264_09695 0.40 +0.3 2,253,102 - CA264_09695 0.42 +0.0 2,253,130 + CA264_09695 0.44 +0.8 2,253,130 + CA264_09695 0.44 -1.5 2,253,130 + CA264_09695 0.44 +1.0 2,253,133 - CA264_09695 0.45 +0.4 2,253,177 - CA264_09695 0.48 +0.4 2,253,231 + CA264_09695 0.51 -0.3 2,253,232 - CA264_09695 0.51 -1.0 2,253,266 + CA264_09695 0.54 +0.0 2,253,291 - CA264_09695 0.56 -0.6 2,253,291 - CA264_09695 0.56 -0.0 2,253,338 + CA264_09695 0.59 -0.1 2,253,339 - CA264_09695 0.59 +2.4 2,253,513 + CA264_09695 0.71 -0.3 2,253,513 + CA264_09695 0.71 -0.6 2,253,513 + CA264_09695 0.71 +0.3 2,253,513 + CA264_09695 0.71 -0.0 2,253,514 - CA264_09695 0.71 +1.4 2,253,517 + CA264_09695 0.71 -0.3 2,253,517 + CA264_09695 0.71 -0.1 2,253,517 + CA264_09695 0.71 -0.1 2,253,518 - CA264_09695 0.71 +0.2 2,253,541 - CA264_09695 0.73 -0.3 2,253,543 - CA264_09695 0.73 -0.2 2,253,543 - CA264_09695 0.73 -0.3 2,253,557 + CA264_09695 0.74 -1.3 2,253,831 + +0.2 2,253,924 + -0.4 2,253,955 + -2.1 2,253,955 + +0.1 2,253,956 - -1.2 2,253,957 + -0.4 2,253,957 + +0.0 2,253,957 + -0.8 2,253,958 - -0.3 2,253,991 - -0.3 2,254,012 - -0.3 2,254,022 - +0.6 2,254,032 - -0.1 2,254,032 - -0.0 2,254,051 + -0.2 2,254,051 + +0.0 2,254,052 - +0.1 2,254,052 - -0.3 2,254,052 - -0.8 2,254,052 - +0.3 2,254,056 + +0.5 2,254,057 - -0.6 2,254,276 + CA264_09700 0.86 -1.0 2,254,277 - CA264_09700 0.86 -1.3 2,254,344 + -0.8 2,254,356 + -0.3 2,254,362 + -0.6 2,254,369 - +1.1 2,254,369 - -1.0 2,254,416 + +0.4 2,254,416 + +0.5 2,254,416 + -0.5 2,254,417 - +0.9 2,254,417 - +0.8 2,254,491 - +1.8 2,254,523 + -0.2 2,254,542 - -0.3 2,254,544 + -1.1 2,254,688 + -1.3 2,254,688 + +0.0 2,254,743 + -0.2 2,254,744 - +1.3 2,254,888 + CA264_09705 0.11 +0.1 2,255,098 - CA264_09705 0.31 -0.6
Or see this region's nucleotide sequence