Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06385 and CA264_06390 are separated by 25 nucleotides CA264_06390 and CA264_06395 are separated by 154 nucleotides CA264_06395 and CA264_06400 overlap by 8 nucleotides CA264_06400 and CA264_06405 overlap by 17 nucleotides
CA264_06385: CA264_06385 - tRNA-binding protein, at 1,484,249 to 1,484,584
_06385
CA264_06390: CA264_06390 - hypothetical protein, at 1,484,610 to 1,484,906
_06390
CA264_06395: CA264_06395 - DUF58 domain-containing protein, at 1,485,061 to 1,485,942
_06395
CA264_06400: CA264_06400 - hypothetical protein, at 1,485,935 to 1,486,846
_06400
CA264_06405: CA264_06405 - VWA domain-containing protein, at 1,486,830 to 1,487,879
_06405
Position (kb)
1485
1486 Strain fitness (log2 ratio)
-2
-1
0
1 at 1484.082 kb on - strand at 1484.098 kb on + strand at 1484.099 kb on - strand at 1484.106 kb on + strand at 1484.106 kb on + strand at 1484.107 kb on - strand at 1484.107 kb on - strand at 1484.109 kb on - strand at 1484.184 kb on + strand at 1484.216 kb on + strand at 1484.216 kb on + strand at 1484.216 kb on + strand at 1484.217 kb on - strand at 1484.217 kb on - strand at 1484.219 kb on - strand at 1484.219 kb on - strand at 1484.219 kb on - strand at 1484.222 kb on + strand at 1484.222 kb on + strand at 1484.222 kb on + strand at 1484.223 kb on - strand at 1484.304 kb on + strand, within CA264_06385 at 1484.304 kb on + strand, within CA264_06385 at 1484.305 kb on - strand, within CA264_06385 at 1484.307 kb on + strand, within CA264_06385 at 1484.307 kb on + strand, within CA264_06385 at 1484.347 kb on + strand, within CA264_06385 at 1484.347 kb on + strand, within CA264_06385 at 1484.348 kb on - strand, within CA264_06385 at 1484.348 kb on - strand, within CA264_06385 at 1484.352 kb on + strand, within CA264_06385 at 1484.352 kb on + strand, within CA264_06385 at 1484.353 kb on - strand, within CA264_06385 at 1484.358 kb on + strand, within CA264_06385 at 1484.359 kb on - strand, within CA264_06385 at 1484.412 kb on - strand, within CA264_06385 at 1484.451 kb on + strand, within CA264_06385 at 1484.497 kb on - strand, within CA264_06385 at 1484.530 kb on + strand, within CA264_06385 at 1484.531 kb on - strand, within CA264_06385 at 1484.531 kb on - strand, within CA264_06385 at 1484.535 kb on + strand, within CA264_06385 at 1484.535 kb on + strand, within CA264_06385 at 1484.580 kb on + strand at 1484.581 kb on - strand at 1484.581 kb on - strand at 1484.581 kb on - strand at 1484.582 kb on + strand at 1484.612 kb on - strand at 1484.612 kb on - strand at 1484.612 kb on - strand at 1484.616 kb on + strand at 1484.617 kb on - strand at 1484.617 kb on - strand at 1485.022 kb on - strand at 1485.028 kb on + strand at 1485.074 kb on + strand at 1485.098 kb on + strand at 1485.099 kb on - strand at 1485.105 kb on - strand at 1485.197 kb on - strand, within CA264_06395 at 1485.216 kb on + strand, within CA264_06395 at 1485.426 kb on + strand, within CA264_06395 at 1485.438 kb on + strand, within CA264_06395 at 1485.448 kb on + strand, within CA264_06395 at 1485.448 kb on + strand, within CA264_06395 at 1485.449 kb on - strand, within CA264_06395 at 1485.482 kb on - strand, within CA264_06395 at 1485.491 kb on + strand, within CA264_06395 at 1485.491 kb on + strand, within CA264_06395 at 1485.492 kb on - strand, within CA264_06395 at 1485.492 kb on - strand, within CA264_06395 at 1485.494 kb on - strand, within CA264_06395 at 1485.548 kb on + strand, within CA264_06395 at 1485.549 kb on - strand, within CA264_06395 at 1485.606 kb on + strand, within CA264_06395 at 1485.787 kb on + strand, within CA264_06395 at 1485.829 kb on - strand, within CA264_06395 at 1485.829 kb on - strand, within CA264_06395 at 1485.841 kb on + strand, within CA264_06395 at 1485.841 kb on + strand, within CA264_06395 at 1485.842 kb on - strand, within CA264_06395 at 1485.853 kb on + strand, within CA264_06395 at 1485.880 kb on + strand at 1485.880 kb on + strand at 1485.919 kb on - strand at 1485.941 kb on - strand at 1486.000 kb on - strand at 1486.000 kb on - strand at 1486.035 kb on + strand, within CA264_06400 at 1486.036 kb on - strand, within CA264_06400 at 1486.059 kb on - strand, within CA264_06400 at 1486.060 kb on + strand, within CA264_06400 at 1486.060 kb on + strand, within CA264_06400 at 1486.061 kb on - strand, within CA264_06400 at 1486.061 kb on - strand, within CA264_06400 at 1486.098 kb on + strand, within CA264_06400 at 1486.199 kb on + strand, within CA264_06400 at 1486.254 kb on - strand, within CA264_06400 at 1486.351 kb on - strand, within CA264_06400 at 1486.364 kb on - strand, within CA264_06400 at 1486.391 kb on - strand, within CA264_06400 at 1486.455 kb on + strand, within CA264_06400 at 1486.481 kb on + strand, within CA264_06400 at 1486.482 kb on - strand, within CA264_06400 at 1486.514 kb on + strand, within CA264_06400 at 1486.577 kb on - strand, within CA264_06400 at 1486.578 kb on + strand, within CA264_06400 at 1486.579 kb on - strand, within CA264_06400 at 1486.670 kb on + strand, within CA264_06400 at 1486.670 kb on + strand, within CA264_06400 at 1486.671 kb on - strand, within CA264_06400 at 1486.706 kb on - strand, within CA264_06400 at 1486.706 kb on - strand, within CA264_06400 at 1486.706 kb on - strand, within CA264_06400 at 1486.724 kb on + strand, within CA264_06400 at 1486.724 kb on + strand, within CA264_06400 at 1486.725 kb on - strand, within CA264_06400 at 1486.725 kb on - strand, within CA264_06400 at 1486.765 kb on - strand at 1486.771 kb on - strand at 1486.821 kb on + strand at 1486.822 kb on - strand at 1486.822 kb on - strand at 1486.834 kb on + strand at 1486.840 kb on + strand at 1486.840 kb on + strand at 1486.840 kb on + strand at 1486.841 kb on - strand at 1486.841 kb on - strand at 1486.880 kb on + strand at 1486.884 kb on + strand at 1486.885 kb on - strand at 1486.914 kb on + strand at 1486.929 kb on + strand at 1486.930 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 1,484,082 - +0.4 1,484,098 + -0.8 1,484,099 - -0.6 1,484,106 + -0.1 1,484,106 + -1.1 1,484,107 - +0.1 1,484,107 - +0.3 1,484,109 - +0.2 1,484,184 + +0.1 1,484,216 + +0.1 1,484,216 + -1.5 1,484,216 + -0.3 1,484,217 - -0.1 1,484,217 - -0.1 1,484,219 - +0.2 1,484,219 - -0.5 1,484,219 - -0.6 1,484,222 + +0.4 1,484,222 + +0.5 1,484,222 + +0.3 1,484,223 - +0.4 1,484,304 + CA264_06385 0.16 +0.2 1,484,304 + CA264_06385 0.16 -0.5 1,484,305 - CA264_06385 0.17 +0.2 1,484,307 + CA264_06385 0.17 -1.1 1,484,307 + CA264_06385 0.17 -0.3 1,484,347 + CA264_06385 0.29 -0.0 1,484,347 + CA264_06385 0.29 +0.4 1,484,348 - CA264_06385 0.29 -0.6 1,484,348 - CA264_06385 0.29 -1.0 1,484,352 + CA264_06385 0.31 -0.4 1,484,352 + CA264_06385 0.31 -0.7 1,484,353 - CA264_06385 0.31 +0.5 1,484,358 + CA264_06385 0.32 +0.2 1,484,359 - CA264_06385 0.33 -0.0 1,484,412 - CA264_06385 0.49 +0.2 1,484,451 + CA264_06385 0.60 -0.6 1,484,497 - CA264_06385 0.74 -0.3 1,484,530 + CA264_06385 0.84 +0.3 1,484,531 - CA264_06385 0.84 +0.2 1,484,531 - CA264_06385 0.84 -0.8 1,484,535 + CA264_06385 0.85 -1.2 1,484,535 + CA264_06385 0.85 +0.2 1,484,580 + -0.1 1,484,581 - +0.7 1,484,581 - -0.2 1,484,581 - -0.2 1,484,582 + -0.0 1,484,612 - -0.2 1,484,612 - -0.0 1,484,612 - -0.3 1,484,616 + -0.7 1,484,617 - +0.5 1,484,617 - -0.4 1,485,022 - -1.0 1,485,028 + +0.3 1,485,074 + +0.2 1,485,098 + -0.6 1,485,099 - +0.0 1,485,105 - -0.1 1,485,197 - CA264_06395 0.15 -0.0 1,485,216 + CA264_06395 0.18 -0.7 1,485,426 + CA264_06395 0.41 -0.3 1,485,438 + CA264_06395 0.43 -1.1 1,485,448 + CA264_06395 0.44 +0.0 1,485,448 + CA264_06395 0.44 +0.2 1,485,449 - CA264_06395 0.44 +0.2 1,485,482 - CA264_06395 0.48 -0.7 1,485,491 + CA264_06395 0.49 +0.7 1,485,491 + CA264_06395 0.49 -1.2 1,485,492 - CA264_06395 0.49 +0.8 1,485,492 - CA264_06395 0.49 +0.8 1,485,494 - CA264_06395 0.49 -0.1 1,485,548 + CA264_06395 0.55 -0.2 1,485,549 - CA264_06395 0.55 +0.4 1,485,606 + CA264_06395 0.62 +0.4 1,485,787 + CA264_06395 0.82 -0.5 1,485,829 - CA264_06395 0.87 -0.7 1,485,829 - CA264_06395 0.87 -0.2 1,485,841 + CA264_06395 0.88 -0.9 1,485,841 + CA264_06395 0.88 +0.2 1,485,842 - CA264_06395 0.89 -0.1 1,485,853 + CA264_06395 0.90 -0.5 1,485,880 + -0.8 1,485,880 + -1.0 1,485,919 - +1.4 1,485,941 - +0.0 1,486,000 - +0.4 1,486,000 - +0.4 1,486,035 + CA264_06400 0.11 -0.2 1,486,036 - CA264_06400 0.11 -1.0 1,486,059 - CA264_06400 0.14 -0.5 1,486,060 + CA264_06400 0.14 -1.0 1,486,060 + CA264_06400 0.14 +0.1 1,486,061 - CA264_06400 0.14 -0.1 1,486,061 - CA264_06400 0.14 -1.5 1,486,098 + CA264_06400 0.18 -0.7 1,486,199 + CA264_06400 0.29 -1.0 1,486,254 - CA264_06400 0.35 -0.4 1,486,351 - CA264_06400 0.46 +0.6 1,486,364 - CA264_06400 0.47 -0.4 1,486,391 - CA264_06400 0.50 -2.3 1,486,455 + CA264_06400 0.57 -0.1 1,486,481 + CA264_06400 0.60 -0.9 1,486,482 - CA264_06400 0.60 +0.2 1,486,514 + CA264_06400 0.63 -0.7 1,486,577 - CA264_06400 0.70 -0.1 1,486,578 + CA264_06400 0.71 +0.3 1,486,579 - CA264_06400 0.71 +1.1 1,486,670 + CA264_06400 0.81 +0.1 1,486,670 + CA264_06400 0.81 +0.4 1,486,671 - CA264_06400 0.81 +0.4 1,486,706 - CA264_06400 0.85 +0.0 1,486,706 - CA264_06400 0.85 -0.2 1,486,706 - CA264_06400 0.85 +0.3 1,486,724 + CA264_06400 0.87 -0.7 1,486,724 + CA264_06400 0.87 -0.5 1,486,725 - CA264_06400 0.87 -0.0 1,486,725 - CA264_06400 0.87 +0.3 1,486,765 - -0.8 1,486,771 - +0.1 1,486,821 + -0.3 1,486,822 - -0.5 1,486,822 - -0.3 1,486,834 + -0.4 1,486,840 + -0.0 1,486,840 + -0.7 1,486,840 + -0.9 1,486,841 - -0.5 1,486,841 - -0.6 1,486,880 + +1.4 1,486,884 + -0.8 1,486,885 - +1.4 1,486,914 + -1.7 1,486,929 + -0.6 1,486,930 + -1.0
Or see this region's nucleotide sequence