Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03705 and CA264_03710 are separated by 120 nucleotides CA264_03710 and CA264_03715 are separated by 234 nucleotides CA264_03715 and CA264_03720 are separated by 165 nucleotides
CA264_03705: CA264_03705 - AraC family transcriptional regulator, at 868,835 to 869,722
_03705
CA264_03710: CA264_03710 - AraC family transcriptional regulator, at 869,843 to 870,721
_03710
CA264_03715: CA264_03715 - DUF983 domain-containing protein, at 870,956 to 871,285
_03715
CA264_03720: CA264_03720 - ABC transporter, at 871,451 to 872,368
_03720
Position (kb) 869
870
871 Strain fitness (log2 ratio) -2
-1
0
1
2 at 868.867 kb on + strand at 868.890 kb on - strand at 868.890 kb on - strand at 868.938 kb on + strand, within CA264_03705 at 868.979 kb on - strand, within CA264_03705 at 869.220 kb on - strand, within CA264_03705 at 869.256 kb on + strand, within CA264_03705 at 869.257 kb on - strand, within CA264_03705 at 869.262 kb on + strand, within CA264_03705 at 869.263 kb on - strand, within CA264_03705 at 869.314 kb on + strand, within CA264_03705 at 869.315 kb on - strand, within CA264_03705 at 869.345 kb on + strand, within CA264_03705 at 869.345 kb on + strand, within CA264_03705 at 869.346 kb on - strand, within CA264_03705 at 869.346 kb on - strand, within CA264_03705 at 869.346 kb on - strand, within CA264_03705 at 869.368 kb on - strand, within CA264_03705 at 869.379 kb on + strand, within CA264_03705 at 869.552 kb on + strand, within CA264_03705 at 869.553 kb on - strand, within CA264_03705 at 869.553 kb on - strand, within CA264_03705 at 869.586 kb on + strand, within CA264_03705 at 869.587 kb on - strand, within CA264_03705 at 869.587 kb on - strand, within CA264_03705 at 869.640 kb on + strand at 869.681 kb on + strand at 869.681 kb on + strand at 869.784 kb on + strand at 869.844 kb on + strand at 869.910 kb on + strand at 870.003 kb on + strand, within CA264_03710 at 870.008 kb on + strand, within CA264_03710 at 870.009 kb on - strand, within CA264_03710 at 870.009 kb on - strand, within CA264_03710 at 870.077 kb on + strand, within CA264_03710 at 870.088 kb on + strand, within CA264_03710 at 870.091 kb on - strand, within CA264_03710 at 870.218 kb on - strand, within CA264_03710 at 870.306 kb on - strand, within CA264_03710 at 870.522 kb on + strand, within CA264_03710 at 870.522 kb on + strand, within CA264_03710 at 870.564 kb on - strand, within CA264_03710 at 870.564 kb on - strand, within CA264_03710 at 870.579 kb on + strand, within CA264_03710 at 870.643 kb on + strand at 870.644 kb on - strand at 870.648 kb on + strand at 870.648 kb on + strand at 870.655 kb on - strand at 870.696 kb on + strand at 870.721 kb on + strand at 870.722 kb on - strand at 870.745 kb on + strand at 870.746 kb on - strand at 870.754 kb on - strand at 870.808 kb on + strand at 870.813 kb on + strand at 870.814 kb on - strand at 870.815 kb on + strand at 870.844 kb on - strand at 870.857 kb on - strand at 870.907 kb on - strand at 870.907 kb on - strand at 870.910 kb on - strand at 870.929 kb on - strand at 870.974 kb on + strand at 870.975 kb on - strand at 870.975 kb on - strand at 871.049 kb on + strand, within CA264_03715 at 871.049 kb on + strand, within CA264_03715 at 871.052 kb on + strand, within CA264_03715 at 871.065 kb on - strand, within CA264_03715 at 871.099 kb on - strand, within CA264_03715 at 871.112 kb on - strand, within CA264_03715 at 871.112 kb on - strand, within CA264_03715 at 871.114 kb on - strand, within CA264_03715 at 871.138 kb on + strand, within CA264_03715 at 871.138 kb on + strand, within CA264_03715 at 871.139 kb on - strand, within CA264_03715 at 871.139 kb on - strand, within CA264_03715 at 871.229 kb on - strand, within CA264_03715 at 871.229 kb on - strand, within CA264_03715 at 871.230 kb on + strand, within CA264_03715 at 871.230 kb on + strand, within CA264_03715 at 871.241 kb on + strand, within CA264_03715 at 871.268 kb on - strand at 871.283 kb on + strand at 871.284 kb on - strand at 871.284 kb on - strand at 871.288 kb on + strand at 871.297 kb on - strand at 871.305 kb on + strand at 871.306 kb on - strand at 871.311 kb on + strand at 871.375 kb on + strand at 871.462 kb on + strand at 871.462 kb on + strand at 871.514 kb on + strand at 871.663 kb on - strand, within CA264_03720 at 871.672 kb on + strand, within CA264_03720 at 871.697 kb on + strand, within CA264_03720 at 871.703 kb on - strand, within CA264_03720
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 868,867 + -0.5 868,890 - -0.3 868,890 - +2.1 868,938 + CA264_03705 0.12 -0.5 868,979 - CA264_03705 0.16 -0.5 869,220 - CA264_03705 0.43 +0.2 869,256 + CA264_03705 0.47 +0.9 869,257 - CA264_03705 0.48 +0.2 869,262 + CA264_03705 0.48 -0.2 869,263 - CA264_03705 0.48 -0.3 869,314 + CA264_03705 0.54 +0.5 869,315 - CA264_03705 0.54 -0.2 869,345 + CA264_03705 0.57 -0.4 869,345 + CA264_03705 0.57 +0.5 869,346 - CA264_03705 0.58 -0.2 869,346 - CA264_03705 0.58 -0.4 869,346 - CA264_03705 0.58 +0.4 869,368 - CA264_03705 0.60 +0.6 869,379 + CA264_03705 0.61 -0.6 869,552 + CA264_03705 0.81 -0.9 869,553 - CA264_03705 0.81 +0.2 869,553 - CA264_03705 0.81 +0.3 869,586 + CA264_03705 0.85 -0.7 869,587 - CA264_03705 0.85 -1.3 869,587 - CA264_03705 0.85 +0.1 869,640 + +1.1 869,681 + -2.4 869,681 + +0.7 869,784 + -0.1 869,844 + +0.4 869,910 + -0.2 870,003 + CA264_03710 0.18 -0.8 870,008 + CA264_03710 0.19 -0.1 870,009 - CA264_03710 0.19 -0.1 870,009 - CA264_03710 0.19 +1.4 870,077 + CA264_03710 0.27 -0.3 870,088 + CA264_03710 0.28 -0.5 870,091 - CA264_03710 0.28 -0.8 870,218 - CA264_03710 0.43 -0.4 870,306 - CA264_03710 0.53 +0.1 870,522 + CA264_03710 0.77 -0.7 870,522 + CA264_03710 0.77 -0.0 870,564 - CA264_03710 0.82 -0.8 870,564 - CA264_03710 0.82 -0.2 870,579 + CA264_03710 0.84 -0.1 870,643 + +1.2 870,644 - -0.6 870,648 + +1.2 870,648 + -0.2 870,655 - -0.2 870,696 + +0.1 870,721 + -0.2 870,722 - +0.2 870,745 + +0.2 870,746 - +0.0 870,754 - -0.7 870,808 + +0.8 870,813 + -0.6 870,814 - +0.4 870,815 + -1.9 870,844 - +0.1 870,857 - +0.3 870,907 - -0.7 870,907 - +0.6 870,910 - -0.6 870,929 - +0.8 870,974 + -0.5 870,975 - -0.4 870,975 - +0.0 871,049 + CA264_03715 0.28 +0.6 871,049 + CA264_03715 0.28 -0.3 871,052 + CA264_03715 0.29 -0.5 871,065 - CA264_03715 0.33 +0.2 871,099 - CA264_03715 0.43 +0.4 871,112 - CA264_03715 0.47 +0.3 871,112 - CA264_03715 0.47 -0.2 871,114 - CA264_03715 0.48 -0.3 871,138 + CA264_03715 0.55 -0.1 871,138 + CA264_03715 0.55 -1.3 871,139 - CA264_03715 0.55 +0.3 871,139 - CA264_03715 0.55 +0.4 871,229 - CA264_03715 0.83 +1.8 871,229 - CA264_03715 0.83 -0.6 871,230 + CA264_03715 0.83 -0.0 871,230 + CA264_03715 0.83 -0.1 871,241 + CA264_03715 0.86 -0.6 871,268 - +0.6 871,283 + -0.8 871,284 - -0.3 871,284 - +1.4 871,288 + +0.3 871,297 - +1.0 871,305 + -0.1 871,306 - +0.5 871,311 + -0.5 871,375 + -0.5 871,462 + +1.0 871,462 + +0.7 871,514 + +0.2 871,663 - CA264_03720 0.23 -0.1 871,672 + CA264_03720 0.24 -0.9 871,697 + CA264_03720 0.27 +0.3 871,703 - CA264_03720 0.27 +0.4
Or see this region's nucleotide sequence