Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00425 and CA264_00430 are separated by 119 nucleotides CA264_00430 and CA264_00435 are separated by 22 nucleotides CA264_00435 and CA264_00440 are separated by 71 nucleotides
CA264_00425: CA264_00425 - hypothetical protein, at 92,814 to 93,122
_00425
CA264_00430: CA264_00430 - hypothetical protein, at 93,242 to 93,706
_00430
CA264_00435: CA264_00435 - energy transducer TonB, at 93,729 to 94,136
_00435
CA264_00440: CA264_00440 - YihA family ribosome biogenesis GTP-binding protein, at 94,208 to 94,816
_00440
Position (kb)
93
94
95 Strain fitness (log2 ratio)
-1
0
1
2
3 at 92.738 kb on + strand at 92.738 kb on + strand at 92.788 kb on + strand at 93.060 kb on + strand, within CA264_00425 at 93.102 kb on + strand at 93.102 kb on + strand at 93.103 kb on - strand at 93.177 kb on - strand at 93.183 kb on - strand at 93.196 kb on + strand at 93.197 kb on - strand at 93.197 kb on - strand at 93.243 kb on + strand at 93.327 kb on + strand, within CA264_00430 at 93.378 kb on + strand, within CA264_00430 at 93.378 kb on + strand, within CA264_00430 at 93.379 kb on - strand, within CA264_00430 at 93.401 kb on - strand, within CA264_00430 at 93.407 kb on + strand, within CA264_00430 at 93.408 kb on - strand, within CA264_00430 at 93.474 kb on + strand, within CA264_00430 at 93.474 kb on + strand, within CA264_00430 at 93.537 kb on + strand, within CA264_00430 at 93.537 kb on + strand, within CA264_00430 at 93.538 kb on - strand, within CA264_00430 at 93.538 kb on - strand, within CA264_00430 at 93.565 kb on + strand, within CA264_00430 at 93.648 kb on - strand, within CA264_00430 at 93.706 kb on + strand at 93.706 kb on + strand at 93.706 kb on + strand at 93.706 kb on + strand at 93.706 kb on + strand at 93.707 kb on - strand at 93.707 kb on - strand at 93.710 kb on + strand at 93.710 kb on + strand at 93.715 kb on + strand at 93.716 kb on - strand at 93.716 kb on - strand at 93.723 kb on + strand at 93.724 kb on - strand at 93.726 kb on - strand at 93.730 kb on + strand at 93.732 kb on + strand at 93.737 kb on + strand at 93.762 kb on + strand at 93.857 kb on + strand, within CA264_00435 at 93.858 kb on - strand, within CA264_00435 at 93.964 kb on + strand, within CA264_00435 at 93.964 kb on + strand, within CA264_00435 at 93.964 kb on + strand, within CA264_00435 at 93.965 kb on - strand, within CA264_00435 at 94.175 kb on + strand at 94.176 kb on - strand at 94.189 kb on - strand at 94.195 kb on - strand at 94.209 kb on + strand at 94.245 kb on - strand at 94.808 kb on + strand at 94.808 kb on + strand at 94.919 kb on + strand at 94.926 kb on + strand at 94.947 kb on + strand at 94.948 kb on - strand at 94.971 kb on + strand at 94.972 kb on - strand at 94.974 kb on - strand at 94.977 kb on + strand at 94.977 kb on + strand at 94.977 kb on + strand at 94.978 kb on - strand at 94.978 kb on - strand at 95.075 kb on + strand at 95.076 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 92,738 + -0.3 92,738 + -0.5 92,788 + -1.6 93,060 + CA264_00425 0.80 +0.6 93,102 + +0.8 93,102 + +0.8 93,103 - +0.2 93,177 - +0.9 93,183 - +0.2 93,196 + +0.5 93,197 - +0.8 93,197 - +1.5 93,243 + +0.2 93,327 + CA264_00430 0.18 +0.9 93,378 + CA264_00430 0.29 -0.3 93,378 + CA264_00430 0.29 -0.1 93,379 - CA264_00430 0.29 -0.6 93,401 - CA264_00430 0.34 +0.2 93,407 + CA264_00430 0.35 +1.2 93,408 - CA264_00430 0.36 +3.1 93,474 + CA264_00430 0.50 +0.5 93,474 + CA264_00430 0.50 +0.3 93,537 + CA264_00430 0.63 -0.4 93,537 + CA264_00430 0.63 -1.6 93,538 - CA264_00430 0.64 -0.6 93,538 - CA264_00430 0.64 -0.2 93,565 + CA264_00430 0.69 -0.4 93,648 - CA264_00430 0.87 -0.8 93,706 + -0.3 93,706 + +0.5 93,706 + +0.2 93,706 + -0.3 93,706 + -0.6 93,707 - -0.2 93,707 - +0.3 93,710 + +0.0 93,710 + +0.1 93,715 + -0.8 93,716 - +0.8 93,716 - -1.2 93,723 + +1.5 93,724 - -0.4 93,726 - +0.9 93,730 + +0.1 93,732 + -0.9 93,737 + -0.3 93,762 + +0.7 93,857 + CA264_00435 0.31 +0.1 93,858 - CA264_00435 0.32 -0.6 93,964 + CA264_00435 0.58 +1.8 93,964 + CA264_00435 0.58 -0.0 93,964 + CA264_00435 0.58 -0.1 93,965 - CA264_00435 0.58 -0.2 94,175 + +1.4 94,176 - -0.2 94,189 - -1.0 94,195 - +1.0 94,209 + -0.6 94,245 - +1.2 94,808 + +0.5 94,808 + +1.1 94,919 + +0.7 94,926 + +0.8 94,947 + -0.2 94,948 - -0.6 94,971 + +0.4 94,972 - -0.3 94,974 - +0.3 94,977 + +0.1 94,977 + +1.2 94,977 + +0.2 94,978 - +0.9 94,978 - +0.5 95,075 + +0.3 95,076 - +3.5
Or see this region's nucleotide sequence