Strain Fitness in Bosea sp. OAE506 around ABIE41_RS06715

Experiment: D-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (C)
1,375,029	+		ABIE41_RS06710	0.44	-0.5
1,375,029	+		ABIE41_RS06710	0.44	-1.0
1,375,029	+		ABIE41_RS06710	0.44	-1.9
1,375,029	+		ABIE41_RS06710	0.44	+1.8
1,375,029	+		ABIE41_RS06710	0.44	+0.8
1,375,030	-		ABIE41_RS06710	0.44	-0.0
1,375,030	-		ABIE41_RS06710	0.44	-0.6
1,375,030	-		ABIE41_RS06710	0.44	+0.2
1,375,030	-		ABIE41_RS06710	0.44	+1.0
1,375,116	+		ABIE41_RS06710	0.49	-1.0
1,375,116	+		ABIE41_RS06710	0.49	+0.0
1,375,116	+		ABIE41_RS06710	0.49	-2.9
1,375,116	+		ABIE41_RS06710	0.49	+0.7
1,375,116	+		ABIE41_RS06710	0.49	+0.3
1,375,116	+		ABIE41_RS06710	0.49	+1.0
1,375,116	+		ABIE41_RS06710	0.49	+0.2
1,375,116	+		ABIE41_RS06710	0.49	-0.9
1,375,116	+		ABIE41_RS06710	0.49	-1.9
1,375,117	-		ABIE41_RS06710	0.49	-0.2
1,375,117	-		ABIE41_RS06710	0.49	-0.1
1,375,117	-		ABIE41_RS06710	0.49	+0.6
1,375,117	-		ABIE41_RS06710	0.49	-3.1
1,375,117	-		ABIE41_RS06710	0.49	+0.0
1,375,117	-		ABIE41_RS06710	0.49	+1.8
1,375,117	-		ABIE41_RS06710	0.49	+0.7
1,375,117	-		ABIE41_RS06710	0.49	+3.2
1,375,117	-		ABIE41_RS06710	0.49	+0.7
1,375,117	-		ABIE41_RS06710	0.49	-0.3
1,375,139	+		ABIE41_RS06710	0.51	+0.1
1,375,150	-		ABIE41_RS06710	0.51	+0.4
1,375,281	+		ABIE41_RS06710	0.59	+0.9
1,375,282	-		ABIE41_RS06710	0.59	-1.0
1,375,282	-		ABIE41_RS06710	0.59	-0.2
1,375,374	+		ABIE41_RS06710	0.64	+0.0
1,375,374	+		ABIE41_RS06710	0.64	-0.8
1,375,374	+		ABIE41_RS06710	0.64	-2.3
1,375,375	-		ABIE41_RS06710	0.64	-0.8
1,375,469	-		ABIE41_RS06710	0.70	-0.6
1,375,481	+		ABIE41_RS06710	0.70	+0.4
1,375,481	+		ABIE41_RS06710	0.70	-2.0
1,375,481	+		ABIE41_RS06710	0.70	+0.4
1,375,481	+		ABIE41_RS06710	0.70	+1.0
1,375,481	+		ABIE41_RS06710	0.70	+0.4
1,375,481	+		ABIE41_RS06710	0.70	-0.1
1,375,481	+		ABIE41_RS06710	0.70	-0.8
1,375,482	-		ABIE41_RS06710	0.70	+1.5
1,375,482	-		ABIE41_RS06710	0.70	-1.5
1,375,482	-		ABIE41_RS06710	0.70	+0.5
1,375,482	-		ABIE41_RS06710	0.70	-0.7
1,375,482	-		ABIE41_RS06710	0.70	+2.4
1,375,482	-		ABIE41_RS06710	0.70	+0.2
1,375,482	-		ABIE41_RS06710	0.70	+0.2
1,375,501	+		ABIE41_RS06710	0.72	+0.3
1,375,501	+		ABIE41_RS06710	0.72	-0.2
1,375,502	-		ABIE41_RS06710	0.72	+0.4
1,375,536	+		ABIE41_RS06710	0.74	+0.5
1,375,536	+		ABIE41_RS06710	0.74	-0.2
1,375,536	+		ABIE41_RS06710	0.74	-0.6
1,375,537	-		ABIE41_RS06710	0.74	+0.0
1,375,537	-		ABIE41_RS06710	0.74	+0.1
1,375,648	+		ABIE41_RS06710	0.80	+0.4
1,375,649	+		ABIE41_RS06710	0.80	-0.4
1,375,649	+		ABIE41_RS06710	0.80	+0.7
1,375,649	+		ABIE41_RS06710	0.80	+2.2
1,375,649	+		ABIE41_RS06710	0.80	-0.5
1,375,649	+		ABIE41_RS06710	0.80	+0.1
1,375,649	+		ABIE41_RS06710	0.80	-0.9
1,375,649	+		ABIE41_RS06710	0.80	+1.6
1,375,649	+		ABIE41_RS06710	0.80	+3.4
1,375,649	+		ABIE41_RS06710	0.80	-0.4
1,375,649	+		ABIE41_RS06710	0.80	-0.7
1,375,649	+		ABIE41_RS06710	0.80	-1.6
1,375,649	+		ABIE41_RS06710	0.80	-0.0
1,375,649	+		ABIE41_RS06710	0.80	+0.4
1,375,649	+		ABIE41_RS06710	0.80	-0.4
1,375,649	+		ABIE41_RS06710	0.80	+0.7
1,375,649	+		ABIE41_RS06710	0.80	-0.5
1,375,649	+		ABIE41_RS06710	0.80	-0.0
1,375,649	+		ABIE41_RS06710	0.80	+1.5
1,375,649	+		ABIE41_RS06710	0.80	+0.2
1,375,650	-		ABIE41_RS06710	0.80	-0.5
1,375,650	-		ABIE41_RS06710	0.80	-0.5
1,375,650	-		ABIE41_RS06710	0.80	-1.8
1,375,650	-		ABIE41_RS06710	0.80	-0.5
1,375,650	-		ABIE41_RS06710	0.80	+0.0
1,375,650	-		ABIE41_RS06710	0.80	-0.3
1,375,650	-		ABIE41_RS06710	0.80	+0.2
1,375,650	-		ABIE41_RS06710	0.80	+0.0
1,375,650	-		ABIE41_RS06710	0.80	+0.8
1,375,650	-		ABIE41_RS06710	0.80	+1.0
1,375,650	-		ABIE41_RS06710	0.80	+0.5
1,375,650	-		ABIE41_RS06710	0.80	-3.9
1,375,730	+		ABIE41_RS06710	0.85	+0.7
1,375,731	-		ABIE41_RS06710	0.85	-0.7
1,375,731	-		ABIE41_RS06710	0.85	+0.4
1,375,731	-		ABIE41_RS06710	0.85	-0.2
1,375,896	+				-0.2
1,375,896	+				+1.3
1,375,897	+				+1.8
1,375,897	-				-0.5
1,375,897	-				-0.1
1,375,897	-				-0.2
1,375,897	-				+0.3
1,375,897	-				+0.5
1,376,039	+		ABIE41_RS06715	0.10	-0.5
1,376,040	-		ABIE41_RS06715	0.11	-2.0
1,376,040	-		ABIE41_RS06715	0.11	-0.2
1,376,090	+		ABIE41_RS06715	0.21	-1.1
1,376,090	+		ABIE41_RS06715	0.21	-0.1
1,376,090	+		ABIE41_RS06715	0.21	-0.0
1,376,090	+		ABIE41_RS06715	0.21	+0.1
1,376,090	+		ABIE41_RS06715	0.21	-1.2
1,376,091	-		ABIE41_RS06715	0.21	+1.3
1,376,116	+		ABIE41_RS06715	0.26	-0.2
1,376,116	+		ABIE41_RS06715	0.26	+0.5
1,376,116	+		ABIE41_RS06715	0.26	+2.3
1,376,117	-		ABIE41_RS06715	0.26	+1.2
1,376,117	-		ABIE41_RS06715	0.26	-0.8
1,376,117	-		ABIE41_RS06715	0.26	+1.3
1,376,117	-		ABIE41_RS06715	0.26	+0.6
1,376,117	-		ABIE41_RS06715	0.26	-0.1
1,376,117	-		ABIE41_RS06715	0.26	-0.2
1,376,159	+		ABIE41_RS06715	0.35	-0.2
1,376,159	+		ABIE41_RS06715	0.35	+0.4
1,376,159	+		ABIE41_RS06715	0.35	+0.1
1,376,159	+		ABIE41_RS06715	0.35	+1.0
1,376,159	+		ABIE41_RS06715	0.35	+0.8
1,376,159	+		ABIE41_RS06715	0.35	+0.8
1,376,159	+		ABIE41_RS06715	0.35	-2.3
1,376,159	+		ABIE41_RS06715	0.35	+0.6
1,376,159	+		ABIE41_RS06715	0.35	+0.3
1,376,159	+		ABIE41_RS06715	0.35	-0.2
1,376,159	+		ABIE41_RS06715	0.35	-0.6
1,376,159	+		ABIE41_RS06715	0.35	-0.1
1,376,159	+		ABIE41_RS06715	0.35	-1.5
1,376,159	+		ABIE41_RS06715	0.35	-1.3
1,376,159	+		ABIE41_RS06715	0.35	+0.1
1,376,159	+		ABIE41_RS06715	0.35	-0.2
1,376,159	+		ABIE41_RS06715	0.35	-2.1
1,376,159	+		ABIE41_RS06715	0.35	-0.0
1,376,159	+		ABIE41_RS06715	0.35	+1.1
1,376,159	+		ABIE41_RS06715	0.35	-0.8
1,376,159	+		ABIE41_RS06715	0.35	-0.8
1,376,159	+		ABIE41_RS06715	0.35	+0.5
1,376,160	-		ABIE41_RS06715	0.35	+0.4
1,376,160	-		ABIE41_RS06715	0.35	-0.3
1,376,160	-		ABIE41_RS06715	0.35	+0.1
1,376,160	-		ABIE41_RS06715	0.35	-0.3
1,376,160	-		ABIE41_RS06715	0.35	-1.9
1,376,160	-		ABIE41_RS06715	0.35	+0.4
1,376,160	-		ABIE41_RS06715	0.35	+0.4
1,376,160	-		ABIE41_RS06715	0.35	+0.7
1,376,160	-		ABIE41_RS06715	0.35	-0.2
1,376,160	-		ABIE41_RS06715	0.35	+0.4
1,376,160	-		ABIE41_RS06715	0.35	-0.3
1,376,160	-		ABIE41_RS06715	0.35	+0.0
1,376,162	+		ABIE41_RS06715	0.35	+1.3
1,376,162	+		ABIE41_RS06715	0.35	-1.4
1,376,162	+		ABIE41_RS06715	0.35	+0.6
1,376,162	+		ABIE41_RS06715	0.35	+0.3
1,376,162	+		ABIE41_RS06715	0.35	+0.9
1,376,163	-		ABIE41_RS06715	0.36	+0.0
1,376,163	-		ABIE41_RS06715	0.36	+0.2
1,376,163	-		ABIE41_RS06715	0.36	-0.3
1,376,163	-		ABIE41_RS06715	0.36	-0.5
1,376,163	-		ABIE41_RS06715	0.36	-0.5
1,376,163	-		ABIE41_RS06715	0.36	+0.2
1,376,163	-		ABIE41_RS06715	0.36	-1.4
1,376,163	-		ABIE41_RS06715	0.36	-2.8
1,376,163	-		ABIE41_RS06715	0.36	+1.1
1,376,163	-		ABIE41_RS06715	0.36	+1.2
1,376,163	-		ABIE41_RS06715	0.36	-1.8
1,376,243	+		ABIE41_RS06715	0.52	+0.0
1,376,243	+		ABIE41_RS06715	0.52	-0.0
1,376,243	+		ABIE41_RS06715	0.52	-0.9
1,376,243	+		ABIE41_RS06715	0.52	-0.2
1,376,244	-		ABIE41_RS06715	0.52	-1.0
1,376,244	-		ABIE41_RS06715	0.52	-0.7
1,376,244	-		ABIE41_RS06715	0.52	+1.5
1,376,244	-		ABIE41_RS06715	0.52	+0.0
1,376,244	-		ABIE41_RS06715	0.52	-0.2
1,376,244	-		ABIE41_RS06715	0.52	-0.5
1,376,244	-		ABIE41_RS06715	0.52	-0.2
1,376,244	-		ABIE41_RS06715	0.52	+0.4
1,376,244	-		ABIE41_RS06715	0.52	-2.0
1,376,294	+		ABIE41_RS06715	0.62	+1.8
1,376,295	-		ABIE41_RS06715	0.62	+0.2
1,376,295	-		ABIE41_RS06715	0.62	-1.1
1,376,296	+		ABIE41_RS06715	0.63	-1.9
1,376,345	+		ABIE41_RS06715	0.73	+2.7
1,376,345	+		ABIE41_RS06715	0.73	-0.3
1,376,345	+		ABIE41_RS06715	0.73	-0.4
1,376,345	+		ABIE41_RS06715	0.73	+0.1
1,376,345	+		ABIE41_RS06715	0.73	+0.0
1,376,345	+		ABIE41_RS06715	0.73	+0.2
1,376,345	+		ABIE41_RS06715	0.73	-2.6
1,376,345	+		ABIE41_RS06715	0.73	-0.8
1,376,345	+		ABIE41_RS06715	0.73	+0.8
1,376,345	+		ABIE41_RS06715	0.73	-0.6
1,376,345	+		ABIE41_RS06715	0.73	-3.4
1,376,345	+		ABIE41_RS06715	0.73	-0.4
1,376,346	-		ABIE41_RS06715	0.73	-0.5
1,376,346	-		ABIE41_RS06715	0.73	+0.1
1,376,346	-		ABIE41_RS06715	0.73	+0.0
1,376,346	-		ABIE41_RS06715	0.73	+0.9
1,376,346	-		ABIE41_RS06715	0.73	-1.2
1,376,346	-		ABIE41_RS06715	0.73	-0.8
1,376,346	-		ABIE41_RS06715	0.73	+0.1
1,376,346	-		ABIE41_RS06715	0.73	-0.4
1,376,346	-		ABIE41_RS06715	0.73	+2.0
1,376,346	-		ABIE41_RS06715	0.73	-0.8
1,376,346	-		ABIE41_RS06715	0.73	-0.2
1,376,346	-		ABIE41_RS06715	0.73	+0.1
1,376,411	+		ABIE41_RS06715	0.86	+1.5
1,376,411	+		ABIE41_RS06715	0.86	-3.0
1,376,411	+		ABIE41_RS06715	0.86	-0.2
1,376,411	+		ABIE41_RS06715	0.86	+1.1
1,376,411	+		ABIE41_RS06715	0.86	-0.2
1,376,411	+		ABIE41_RS06715	0.86	-0.2
1,376,411	+		ABIE41_RS06715	0.86	+1.3
1,376,412	-		ABIE41_RS06715	0.86	+0.5
1,376,412	-		ABIE41_RS06715	0.86	+0.8
1,376,412	-		ABIE41_RS06715	0.86	+0.8
1,376,412	-		ABIE41_RS06715	0.86	-1.8
1,376,412	-		ABIE41_RS06715	0.86	-0.8
1,376,412	-		ABIE41_RS06715	0.86	-0.4
1,376,412	-		ABIE41_RS06715	0.86	-1.6
1,376,412	-		ABIE41_RS06715	0.86	-0.2
1,376,413	-		ABIE41_RS06715	0.86	+0.4
1,376,509	+				-0.1
1,376,509	+				-0.3
1,376,509	+				+0.7
1,376,510	-				-1.1
1,376,510	-				+0.1
1,376,527	+				+1.8
1,376,527	+				-0.8
1,376,528	-				+0.4
1,376,528	-				-0.0
1,376,528	-				+0.0
1,376,553	+				-0.2
1,376,553	+				+0.8
1,376,553	+				+1.1
1,376,553	+				-0.6
1,376,553	+				-1.4
1,376,553	+				-2.8
1,376,553	+				+0.9
1,376,553	+				-0.0
1,376,553	+				-2.9
1,376,553	+				-0.2
1,376,553	+				+0.3
1,376,553	+				+0.3
1,376,553	+				+0.6
1,376,553	+				-0.5
1,376,553	+				+0.6
1,376,554	-				-0.7
1,376,554	-				+0.5
1,376,554	-				+0.2
1,376,554	-				-0.4
1,376,554	-				-0.4
1,376,554	-				-0.9
1,376,554	-				-0.1
1,376,554	-				-1.0
1,376,554	-				-0.7
1,376,554	-				-0.4
1,376,554	-				+0.5
1,376,591	+				+1.3
1,376,591	+				+0.2
1,376,591	+				-0.7
1,376,592	-				-0.0
1,376,592	-				+0.9
1,376,592	-				+1.5
1,376,643	+				-0.8
1,376,644	-				+1.4
1,376,650	+				-1.5
1,376,650	+				+0.0
1,376,651	-				+2.1
1,376,651	-				+0.8
1,376,651	-				-0.3
1,376,652	+				-2.6
1,376,652	+				-1.3
1,376,652	+				-1.6
1,376,652	+				+2.0
1,376,652	+				-0.3
1,376,653	-				+0.0
1,376,752	+				+0.7
1,376,752	+				-1.4
1,376,752	+				+0.0
1,376,752	+				+0.0
1,376,752	+				-1.0
1,376,752	+				-1.0
1,376,752	+				-0.1
1,376,752	+				+0.0
1,376,752	+				-0.1
1,376,753	-				+1.0
1,376,753	-				+0.4
1,376,753	-				-0.5
1,376,753	-				+0.0
1,376,753	-				+0.0
1,376,753	-				-2.1
1,377,013	-				+0.2
1,377,111	+		ABIE41_RS06720	0.16	-2.9
1,377,153	+		ABIE41_RS06720	0.25	-0.2
1,377,153	+		ABIE41_RS06720	0.25	-0.7
1,377,272	+		ABIE41_RS06720	0.52	-0.5
1,377,272	+		ABIE41_RS06720	0.52	-3.0
1,377,333	+		ABIE41_RS06720	0.66	-0.4
1,377,384	+		ABIE41_RS06720	0.77	+0.7
1,377,384	+		ABIE41_RS06720	0.77	+2.0
1,377,384	+		ABIE41_RS06720	0.77	-0.2
1,377,384	+		ABIE41_RS06720	0.77	-0.6
1,377,384	+		ABIE41_RS06720	0.77	+0.4
1,377,385	-		ABIE41_RS06720	0.77	-0.4
1,377,385	-		ABIE41_RS06720	0.77	-0.8