Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS24895 and ABID97_RS24900 are separated by 47 nucleotides ABID97_RS24900 and ABID97_RS24905 overlap by 4 nucleotides ABID97_RS24905 and ABID97_RS24910 overlap by 4 nucleotides ABID97_RS24910 and ABID97_RS24915 are separated by 15 nucleotides
ABID97_RS24895: ABID97_RS24895 - hypothetical protein, at 5,158,511 to 5,158,951
_RS24895
ABID97_RS24900: ABID97_RS24900 - lysophospholipid acyltransferase family protein, at 5,158,999 to 5,159,670
_RS24900
ABID97_RS24905: ABID97_RS24905 - phosphatidate cytidylyltransferase, at 5,159,667 to 5,160,620
_RS24905
ABID97_RS24910: ABID97_RS24910 - YdeI/OmpD-associated family protein, at 5,160,617 to 5,161,228
_RS24910
ABID97_RS24915: ABID97_RS24915 - hypothetical protein, at 5,161,244 to 5,161,864
_RS24915
Position (kb) 5159
5160
5161 Strain fitness (log2 ratio) -1
0
1
2 at 5158.700 kb on + strand, within ABID97_RS24895 at 5158.701 kb on - strand, within ABID97_RS24895 at 5159.116 kb on + strand, within ABID97_RS24900 at 5159.116 kb on + strand, within ABID97_RS24900 at 5159.117 kb on - strand, within ABID97_RS24900 at 5159.215 kb on + strand, within ABID97_RS24900 at 5159.895 kb on + strand, within ABID97_RS24905 at 5159.895 kb on + strand, within ABID97_RS24905 at 5159.896 kb on - strand, within ABID97_RS24905 at 5159.941 kb on - strand, within ABID97_RS24905 at 5159.941 kb on - strand, within ABID97_RS24905 at 5159.941 kb on - strand, within ABID97_RS24905 at 5159.983 kb on - strand, within ABID97_RS24905 at 5159.983 kb on - strand, within ABID97_RS24905 at 5160.027 kb on + strand, within ABID97_RS24905 at 5160.028 kb on - strand, within ABID97_RS24905 at 5160.028 kb on - strand, within ABID97_RS24905 at 5160.036 kb on + strand, within ABID97_RS24905 at 5160.036 kb on + strand, within ABID97_RS24905 at 5160.037 kb on - strand, within ABID97_RS24905 at 5160.057 kb on + strand, within ABID97_RS24905 at 5160.057 kb on + strand, within ABID97_RS24905 at 5160.058 kb on - strand, within ABID97_RS24905 at 5160.276 kb on + strand, within ABID97_RS24905 at 5160.276 kb on + strand, within ABID97_RS24905 at 5160.276 kb on + strand, within ABID97_RS24905 at 5160.277 kb on - strand, within ABID97_RS24905 at 5160.277 kb on - strand, within ABID97_RS24905 at 5160.277 kb on - strand, within ABID97_RS24905 at 5160.393 kb on + strand, within ABID97_RS24905 at 5160.394 kb on - strand, within ABID97_RS24905 at 5160.394 kb on - strand, within ABID97_RS24905 at 5160.394 kb on - strand, within ABID97_RS24905 at 5160.586 kb on - strand at 5160.818 kb on + strand, within ABID97_RS24910 at 5160.819 kb on - strand, within ABID97_RS24910 at 5161.121 kb on + strand, within ABID97_RS24910 at 5161.220 kb on + strand at 5161.246 kb on - strand at 5161.250 kb on - strand at 5161.284 kb on + strand at 5161.285 kb on - strand at 5161.285 kb on - strand at 5161.285 kb on - strand at 5161.285 kb on - strand at 5161.286 kb on - strand at 5161.543 kb on - strand, within ABID97_RS24915 at 5161.543 kb on - strand, within ABID97_RS24915 at 5161.575 kb on + strand, within ABID97_RS24915
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 5,158,700 + ABID97_RS24895 0.43 +0.2 5,158,701 - ABID97_RS24895 0.43 +1.0 5,159,116 + ABID97_RS24900 0.17 +0.2 5,159,116 + ABID97_RS24900 0.17 +0.4 5,159,117 - ABID97_RS24900 0.18 +0.0 5,159,215 + ABID97_RS24900 0.32 -0.1 5,159,895 + ABID97_RS24905 0.24 +0.8 5,159,895 + ABID97_RS24905 0.24 -0.2 5,159,896 - ABID97_RS24905 0.24 +1.0 5,159,941 - ABID97_RS24905 0.29 -0.6 5,159,941 - ABID97_RS24905 0.29 -0.1 5,159,941 - ABID97_RS24905 0.29 +0.1 5,159,983 - ABID97_RS24905 0.33 -0.3 5,159,983 - ABID97_RS24905 0.33 -0.0 5,160,027 + ABID97_RS24905 0.38 +0.9 5,160,028 - ABID97_RS24905 0.38 +0.1 5,160,028 - ABID97_RS24905 0.38 +0.2 5,160,036 + ABID97_RS24905 0.39 -0.2 5,160,036 + ABID97_RS24905 0.39 +0.1 5,160,037 - ABID97_RS24905 0.39 -0.1 5,160,057 + ABID97_RS24905 0.41 +0.3 5,160,057 + ABID97_RS24905 0.41 +0.4 5,160,058 - ABID97_RS24905 0.41 +0.3 5,160,276 + ABID97_RS24905 0.64 -1.3 5,160,276 + ABID97_RS24905 0.64 +0.4 5,160,276 + ABID97_RS24905 0.64 -0.2 5,160,277 - ABID97_RS24905 0.64 -0.1 5,160,277 - ABID97_RS24905 0.64 +1.0 5,160,277 - ABID97_RS24905 0.64 -1.2 5,160,393 + ABID97_RS24905 0.76 +0.1 5,160,394 - ABID97_RS24905 0.76 -0.4 5,160,394 - ABID97_RS24905 0.76 +0.2 5,160,394 - ABID97_RS24905 0.76 +2.3 5,160,586 - +0.0 5,160,818 + ABID97_RS24910 0.33 -0.3 5,160,819 - ABID97_RS24910 0.33 +0.0 5,161,121 + ABID97_RS24910 0.82 -0.5 5,161,220 + +1.0 5,161,246 - -0.2 5,161,250 - +0.4 5,161,284 + +0.4 5,161,285 - -0.1 5,161,285 - +0.1 5,161,285 - +0.3 5,161,285 - +0.0 5,161,286 - +0.2 5,161,543 - ABID97_RS24915 0.48 +0.3 5,161,543 - ABID97_RS24915 0.48 +0.1 5,161,575 + ABID97_RS24915 0.53 -0.2
Or see this region's nucleotide sequence