Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS24645 and ABID97_RS24650 are separated by 575 nucleotides ABID97_RS24650 and ABID97_RS24655 are separated by 23 nucleotides
ABID97_RS24645: ABID97_RS24645 - autotransporter outer membrane beta-barrel domain-containing protein, at 5,101,113 to 5,106,347
_RS24645
ABID97_RS24650: ABID97_RS24650 - lysophospholipid acyltransferase family protein, at 5,106,923 to 5,107,669
_RS24650
ABID97_RS24655: ABID97_RS24655 - dihydroorotase, at 5,107,693 to 5,108,979
_RS24655
Position (kb)
5106
5107
5108 Strain fitness (log2 ratio)
-2
-1
0
1 at 5105.935 kb on + strand at 5105.935 kb on + strand at 5105.935 kb on + strand at 5105.935 kb on + strand at 5105.936 kb on - strand at 5105.936 kb on - strand at 5105.936 kb on - strand at 5105.936 kb on - strand at 5106.103 kb on + strand at 5106.103 kb on + strand at 5106.104 kb on - strand at 5106.104 kb on - strand at 5106.104 kb on - strand at 5106.104 kb on - strand at 5106.110 kb on + strand at 5106.111 kb on - strand at 5106.322 kb on + strand at 5106.322 kb on + strand at 5106.334 kb on + strand at 5106.335 kb on - strand at 5106.488 kb on + strand at 5106.619 kb on + strand at 5106.620 kb on - strand at 5106.620 kb on - strand at 5106.632 kb on + strand at 5106.633 kb on - strand at 5106.705 kb on + strand at 5106.705 kb on + strand at 5106.705 kb on + strand at 5106.705 kb on + strand at 5106.706 kb on - strand at 5106.706 kb on - strand at 5106.706 kb on - strand at 5106.706 kb on - strand at 5106.709 kb on + strand at 5106.709 kb on + strand at 5106.709 kb on + strand at 5106.709 kb on + strand at 5106.710 kb on - strand at 5106.710 kb on - strand at 5106.710 kb on - strand at 5106.866 kb on - strand at 5107.093 kb on - strand, within ABID97_RS24650 at 5107.093 kb on - strand, within ABID97_RS24650 at 5107.329 kb on + strand, within ABID97_RS24650 at 5107.329 kb on + strand, within ABID97_RS24650 at 5107.330 kb on - strand, within ABID97_RS24650 at 5107.330 kb on - strand, within ABID97_RS24650 at 5107.330 kb on - strand, within ABID97_RS24650 at 5108.453 kb on + strand, within ABID97_RS24655 at 5108.453 kb on + strand, within ABID97_RS24655 at 5108.454 kb on - strand, within ABID97_RS24655 at 5108.471 kb on + strand, within ABID97_RS24655 at 5108.471 kb on + strand, within ABID97_RS24655 at 5108.471 kb on + strand, within ABID97_RS24655
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 5,105,935 + -0.7 5,105,935 + -1.8 5,105,935 + -0.4 5,105,935 + -0.1 5,105,936 - +0.5 5,105,936 - +0.4 5,105,936 - -0.2 5,105,936 - -0.0 5,106,103 + -0.4 5,106,103 + +0.3 5,106,104 - +0.1 5,106,104 - -0.5 5,106,104 - +0.1 5,106,104 - +0.2 5,106,110 + +0.0 5,106,111 - -0.3 5,106,322 + -0.7 5,106,322 + -0.2 5,106,334 + -0.5 5,106,335 - -0.0 5,106,488 + -0.5 5,106,619 + -0.1 5,106,620 - +0.0 5,106,620 - +0.3 5,106,632 + -0.9 5,106,633 - +0.4 5,106,705 + -0.4 5,106,705 + -1.0 5,106,705 + -1.1 5,106,705 + -1.0 5,106,706 - -1.0 5,106,706 - -0.4 5,106,706 - -0.6 5,106,706 - -0.4 5,106,709 + -0.4 5,106,709 + -0.7 5,106,709 + -0.4 5,106,709 + +0.7 5,106,710 - -0.5 5,106,710 - +1.4 5,106,710 - +0.0 5,106,866 - -0.7 5,107,093 - ABID97_RS24650 0.23 -0.6 5,107,093 - ABID97_RS24650 0.23 -1.0 5,107,329 + ABID97_RS24650 0.54 -0.5 5,107,329 + ABID97_RS24650 0.54 -0.7 5,107,330 - ABID97_RS24650 0.54 -0.2 5,107,330 - ABID97_RS24650 0.54 -0.5 5,107,330 - ABID97_RS24650 0.54 -0.7 5,108,453 + ABID97_RS24655 0.59 -0.5 5,108,453 + ABID97_RS24655 0.59 -0.5 5,108,454 - ABID97_RS24655 0.59 -1.9 5,108,471 + ABID97_RS24655 0.60 +0.7 5,108,471 + ABID97_RS24655 0.60 -0.9 5,108,471 + ABID97_RS24655 0.60 -0.3
Or see this region's nucleotide sequence