Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS24500 and ABID97_RS24505 are separated by 156 nucleotides ABID97_RS24505 and ABID97_RS24510 are separated by 18 nucleotides ABID97_RS24510 and ABID97_RS24515 are separated by 16 nucleotides
ABID97_RS24500: ABID97_RS24500 - oxalyl-CoA decarboxylase, at 5,071,554 to 5,073,389
_RS24500
ABID97_RS24505: ABID97_RS24505 - Crp/Fnr family transcriptional regulator, at 5,073,546 to 5,074,154
_RS24505
ABID97_RS24510: ABID97_RS24510 - cytidylate kinase family protein, at 5,074,173 to 5,075,009
_RS24510
ABID97_RS24515: ABID97_RS24515 - tripartite tricarboxylate transporter permease, at 5,075,026 to 5,076,555
_RS24515
Position (kb) 5074
5075
5076 Strain fitness (log2 ratio) -1
0
1 at 5073.378 kb on + strand at 5073.378 kb on + strand at 5073.378 kb on + strand at 5073.436 kb on + strand at 5073.723 kb on + strand, within ABID97_RS24505 at 5073.723 kb on + strand, within ABID97_RS24505 at 5073.723 kb on + strand, within ABID97_RS24505 at 5073.724 kb on - strand, within ABID97_RS24505 at 5073.822 kb on + strand, within ABID97_RS24505 at 5073.823 kb on - strand, within ABID97_RS24505 at 5073.823 kb on - strand, within ABID97_RS24505 at 5073.823 kb on - strand, within ABID97_RS24505 at 5073.956 kb on - strand, within ABID97_RS24505 at 5073.957 kb on + strand, within ABID97_RS24505 at 5073.957 kb on + strand, within ABID97_RS24505 at 5074.099 kb on - strand at 5074.165 kb on + strand at 5074.528 kb on + strand, within ABID97_RS24510 at 5075.343 kb on - strand, within ABID97_RS24515 at 5075.465 kb on + strand, within ABID97_RS24515 at 5075.466 kb on - strand, within ABID97_RS24515 at 5075.466 kb on - strand, within ABID97_RS24515 at 5075.466 kb on - strand, within ABID97_RS24515 at 5075.466 kb on - strand, within ABID97_RS24515
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 5,073,378 + +1.0 5,073,378 + -0.4 5,073,378 + -0.2 5,073,436 + +0.5 5,073,723 + ABID97_RS24505 0.29 +0.4 5,073,723 + ABID97_RS24505 0.29 +0.6 5,073,723 + ABID97_RS24505 0.29 +0.3 5,073,724 - ABID97_RS24505 0.29 +0.4 5,073,822 + ABID97_RS24505 0.45 -0.1 5,073,823 - ABID97_RS24505 0.45 +0.6 5,073,823 - ABID97_RS24505 0.45 -0.3 5,073,823 - ABID97_RS24505 0.45 +0.1 5,073,956 - ABID97_RS24505 0.67 +1.0 5,073,957 + ABID97_RS24505 0.67 +0.2 5,073,957 + ABID97_RS24505 0.67 -0.2 5,074,099 - -0.3 5,074,165 + +0.2 5,074,528 + ABID97_RS24510 0.42 -1.1 5,075,343 - ABID97_RS24515 0.21 -0.1 5,075,465 + ABID97_RS24515 0.29 -0.1 5,075,466 - ABID97_RS24515 0.29 +0.3 5,075,466 - ABID97_RS24515 0.29 -0.6 5,075,466 - ABID97_RS24515 0.29 +0.4 5,075,466 - ABID97_RS24515 0.29 -0.1
Or see this region's nucleotide sequence