Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS23630 and ABID97_RS23635 are separated by 2 nucleotides ABID97_RS23635 and ABID97_RS23640 are separated by 15 nucleotides ABID97_RS23640 and ABID97_RS23645 are separated by 73 nucleotides
ABID97_RS23630: ABID97_RS23630 - radical SAM family heme chaperone HemW, at 4,895,076 to 4,896,335
_RS23630
ABID97_RS23635: ABID97_RS23635 - non-canonical purine NTP pyrophosphatase, at 4,896,338 to 4,896,937
_RS23635
ABID97_RS23640: ABID97_RS23640 - ribonuclease PH, at 4,896,953 to 4,897,684
_RS23640
ABID97_RS23645: ABID97_RS23645 - PP2C family serine/threonine-protein phosphatase, at 4,897,758 to 4,898,663
_RS23645
Position (kb) 4896
4897 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4895.359 kb on + strand, within ABID97_RS23630 at 4895.360 kb on - strand, within ABID97_RS23630 at 4895.360 kb on - strand, within ABID97_RS23630 at 4895.446 kb on + strand, within ABID97_RS23630 at 4895.447 kb on - strand, within ABID97_RS23630 at 4895.464 kb on + strand, within ABID97_RS23630 at 4895.464 kb on + strand, within ABID97_RS23630 at 4895.465 kb on - strand, within ABID97_RS23630 at 4895.503 kb on + strand, within ABID97_RS23630 at 4895.572 kb on + strand, within ABID97_RS23630 at 4895.573 kb on - strand, within ABID97_RS23630 at 4895.573 kb on - strand, within ABID97_RS23630 at 4895.645 kb on - strand, within ABID97_RS23630 at 4895.645 kb on - strand, within ABID97_RS23630 at 4895.645 kb on - strand, within ABID97_RS23630 at 4895.697 kb on + strand, within ABID97_RS23630 at 4895.698 kb on - strand, within ABID97_RS23630 at 4895.698 kb on - strand, within ABID97_RS23630 at 4895.728 kb on + strand, within ABID97_RS23630 at 4895.728 kb on + strand, within ABID97_RS23630 at 4895.729 kb on - strand, within ABID97_RS23630 at 4895.729 kb on - strand, within ABID97_RS23630 at 4895.885 kb on - strand, within ABID97_RS23630 at 4896.106 kb on + strand, within ABID97_RS23630 at 4896.106 kb on + strand, within ABID97_RS23630 at 4896.106 kb on + strand, within ABID97_RS23630 at 4896.107 kb on - strand, within ABID97_RS23630 at 4896.178 kb on + strand, within ABID97_RS23630 at 4896.214 kb on + strand at 4896.214 kb on + strand at 4896.215 kb on - strand at 4896.356 kb on + strand at 4896.411 kb on - strand, within ABID97_RS23635 at 4896.456 kb on + strand, within ABID97_RS23635 at 4896.457 kb on - strand, within ABID97_RS23635 at 4896.457 kb on - strand, within ABID97_RS23635 at 4896.457 kb on - strand, within ABID97_RS23635 at 4896.457 kb on - strand, within ABID97_RS23635 at 4896.457 kb on - strand, within ABID97_RS23635 at 4896.457 kb on - strand, within ABID97_RS23635 at 4896.678 kb on + strand, within ABID97_RS23635 at 4896.678 kb on + strand, within ABID97_RS23635 at 4896.678 kb on + strand, within ABID97_RS23635 at 4896.679 kb on - strand, within ABID97_RS23635 at 4896.679 kb on - strand, within ABID97_RS23635 at 4896.679 kb on - strand, within ABID97_RS23635 at 4896.679 kb on - strand, within ABID97_RS23635 at 4896.954 kb on + strand at 4896.954 kb on + strand at 4896.954 kb on + strand at 4896.955 kb on - strand at 4897.143 kb on + strand, within ABID97_RS23640 at 4897.143 kb on + strand, within ABID97_RS23640 at 4897.143 kb on + strand, within ABID97_RS23640 at 4897.144 kb on - strand, within ABID97_RS23640
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 4,895,359 + ABID97_RS23630 0.22 +0.6 4,895,360 - ABID97_RS23630 0.23 +1.1 4,895,360 - ABID97_RS23630 0.23 +0.8 4,895,446 + ABID97_RS23630 0.29 +1.6 4,895,447 - ABID97_RS23630 0.29 +0.9 4,895,464 + ABID97_RS23630 0.31 +1.3 4,895,464 + ABID97_RS23630 0.31 +0.3 4,895,465 - ABID97_RS23630 0.31 +0.5 4,895,503 + ABID97_RS23630 0.34 -1.2 4,895,572 + ABID97_RS23630 0.39 -0.5 4,895,573 - ABID97_RS23630 0.39 +1.2 4,895,573 - ABID97_RS23630 0.39 +0.7 4,895,645 - ABID97_RS23630 0.45 +0.4 4,895,645 - ABID97_RS23630 0.45 +0.5 4,895,645 - ABID97_RS23630 0.45 +0.8 4,895,697 + ABID97_RS23630 0.49 -0.2 4,895,698 - ABID97_RS23630 0.49 +1.3 4,895,698 - ABID97_RS23630 0.49 +0.8 4,895,728 + ABID97_RS23630 0.52 +1.1 4,895,728 + ABID97_RS23630 0.52 +1.3 4,895,729 - ABID97_RS23630 0.52 +0.3 4,895,729 - ABID97_RS23630 0.52 +0.2 4,895,885 - ABID97_RS23630 0.64 +1.1 4,896,106 + ABID97_RS23630 0.82 -0.1 4,896,106 + ABID97_RS23630 0.82 +1.8 4,896,106 + ABID97_RS23630 0.82 +0.9 4,896,107 - ABID97_RS23630 0.82 +1.2 4,896,178 + ABID97_RS23630 0.87 +1.1 4,896,214 + +1.2 4,896,214 + +1.3 4,896,215 - -2.2 4,896,356 + -1.9 4,896,411 - ABID97_RS23635 0.12 -1.3 4,896,456 + ABID97_RS23635 0.20 -1.5 4,896,457 - ABID97_RS23635 0.20 -1.9 4,896,457 - ABID97_RS23635 0.20 -1.8 4,896,457 - ABID97_RS23635 0.20 -3.4 4,896,457 - ABID97_RS23635 0.20 -1.7 4,896,457 - ABID97_RS23635 0.20 -1.6 4,896,457 - ABID97_RS23635 0.20 -1.9 4,896,678 + ABID97_RS23635 0.57 -1.6 4,896,678 + ABID97_RS23635 0.57 -2.5 4,896,678 + ABID97_RS23635 0.57 -2.3 4,896,679 - ABID97_RS23635 0.57 -1.7 4,896,679 - ABID97_RS23635 0.57 -1.2 4,896,679 - ABID97_RS23635 0.57 -2.0 4,896,679 - ABID97_RS23635 0.57 -1.5 4,896,954 + -0.2 4,896,954 + +0.2 4,896,954 + -0.5 4,896,955 - -0.1 4,897,143 + ABID97_RS23640 0.26 +0.8 4,897,143 + ABID97_RS23640 0.26 +0.4 4,897,143 + ABID97_RS23640 0.26 +0.6 4,897,144 - ABID97_RS23640 0.26 +0.2
Or see this region's nucleotide sequence