Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS22150 and ABID97_RS22155 are separated by 20 nucleotides ABID97_RS22155 and ABID97_RS22160 are separated by 9 nucleotides ABID97_RS22160 and ABID97_RS22165 are separated by 325 nucleotides ABID97_RS22165 and ABID97_RS22170 are separated by 213 nucleotides
ABID97_RS22150: ABID97_RS22150 - tripartite tricarboxylate transporter substrate binding protein, at 4,588,885 to 4,589,874
_RS22150
ABID97_RS22155: ABID97_RS22155 - acyl-CoA thioesterase, at 4,589,895 to 4,590,326
_RS22155
ABID97_RS22160: ABID97_RS22160 - hypothetical protein, at 4,590,336 to 4,590,548
_RS22160
ABID97_RS22165: ABID97_RS22165 - hypothetical protein, at 4,590,874 to 4,591,092
_RS22165
ABID97_RS22170: ABID97_RS22170 - magnesium-translocating P-type ATPase, at 4,591,306 to 4,594,029
_RS22170
Position (kb) 4590
4591 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4589.368 kb on + strand, within ABID97_RS22150 at 4589.368 kb on + strand, within ABID97_RS22150 at 4589.369 kb on - strand, within ABID97_RS22150 at 4589.369 kb on - strand, within ABID97_RS22150 at 4589.919 kb on + strand at 4589.920 kb on - strand at 4590.186 kb on + strand, within ABID97_RS22155 at 4590.186 kb on + strand, within ABID97_RS22155 at 4590.187 kb on - strand, within ABID97_RS22155 at 4590.324 kb on + strand at 4590.325 kb on - strand at 4590.450 kb on + strand, within ABID97_RS22160 at 4590.450 kb on + strand, within ABID97_RS22160 at 4590.468 kb on + strand, within ABID97_RS22160 at 4590.468 kb on + strand, within ABID97_RS22160 at 4590.469 kb on - strand, within ABID97_RS22160 at 4590.469 kb on - strand, within ABID97_RS22160
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 4,589,368 + ABID97_RS22150 0.49 +0.1 4,589,368 + ABID97_RS22150 0.49 -0.2 4,589,369 - ABID97_RS22150 0.49 -0.6 4,589,369 - ABID97_RS22150 0.49 -0.3 4,589,919 + +1.3 4,589,920 - +0.0 4,590,186 + ABID97_RS22155 0.67 +1.9 4,590,186 + ABID97_RS22155 0.67 +0.1 4,590,187 - ABID97_RS22155 0.68 -0.5 4,590,324 + +1.0 4,590,325 - +0.9 4,590,450 + ABID97_RS22160 0.54 -0.8 4,590,450 + ABID97_RS22160 0.54 -1.3 4,590,468 + ABID97_RS22160 0.62 -0.7 4,590,468 + ABID97_RS22160 0.62 +1.0 4,590,469 - ABID97_RS22160 0.62 -0.6 4,590,469 - ABID97_RS22160 0.62 -2.3
Or see this region's nucleotide sequence