Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS14080 and ABID97_RS14085 are separated by 5 nucleotides ABID97_RS14085 and ABID97_RS14090 are separated by 76 nucleotides ABID97_RS14090 and ABID97_RS14095 overlap by 4 nucleotides
ABID97_RS14080: ABID97_RS14080 - M3 family metallopeptidase, at 2,920,960 to 2,923,008
_RS14080
ABID97_RS14085: ABID97_RS14085 - bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD, at 2,923,014 to 2,923,865
_RS14085
ABID97_RS14090: ABID97_RS14090 - response regulator transcription factor, at 2,923,942 to 2,924,571
_RS14090
ABID97_RS14095: ABID97_RS14095 - PAS domain S-box protein, at 2,924,568 to 2,927,111
_RS14095
Position (kb)
2923
2924 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2922.023 kb on + strand, within ABID97_RS14080 at 2922.023 kb on + strand, within ABID97_RS14080 at 2922.024 kb on - strand, within ABID97_RS14080 at 2922.107 kb on + strand, within ABID97_RS14080 at 2922.308 kb on + strand, within ABID97_RS14080 at 2922.309 kb on - strand, within ABID97_RS14080 at 2922.309 kb on - strand, within ABID97_RS14080 at 2922.309 kb on - strand, within ABID97_RS14080 at 2922.309 kb on - strand, within ABID97_RS14080 at 2922.318 kb on - strand, within ABID97_RS14080 at 2922.368 kb on + strand, within ABID97_RS14080 at 2922.368 kb on + strand, within ABID97_RS14080 at 2922.368 kb on + strand, within ABID97_RS14080 at 2922.369 kb on - strand, within ABID97_RS14080 at 2922.395 kb on + strand, within ABID97_RS14080 at 2922.395 kb on + strand, within ABID97_RS14080 at 2922.483 kb on - strand, within ABID97_RS14080 at 2922.483 kb on - strand, within ABID97_RS14080 at 2922.485 kb on + strand, within ABID97_RS14080 at 2922.486 kb on - strand, within ABID97_RS14080 at 2922.486 kb on - strand, within ABID97_RS14080 at 2922.680 kb on + strand, within ABID97_RS14080 at 2922.680 kb on + strand, within ABID97_RS14080 at 2922.680 kb on + strand, within ABID97_RS14080 at 2922.680 kb on + strand, within ABID97_RS14080 at 2922.681 kb on - strand, within ABID97_RS14080 at 2922.681 kb on - strand, within ABID97_RS14080 at 2922.689 kb on + strand, within ABID97_RS14080 at 2922.690 kb on - strand, within ABID97_RS14080 at 2922.752 kb on + strand, within ABID97_RS14080 at 2922.752 kb on + strand, within ABID97_RS14080 at 2922.753 kb on - strand, within ABID97_RS14080 at 2923.884 kb on + strand at 2923.884 kb on + strand at 2923.937 kb on - strand at 2923.944 kb on - strand at 2923.944 kb on - strand at 2923.944 kb on - strand at 2924.477 kb on + strand, within ABID97_RS14090 at 2924.478 kb on - strand, within ABID97_RS14090 at 2924.516 kb on - strand at 2924.540 kb on + strand at 2924.540 kb on + strand at 2924.540 kb on + strand at 2924.540 kb on + strand at 2924.541 kb on - strand at 2924.541 kb on - strand at 2924.541 kb on - strand at 2924.541 kb on - strand at 2924.541 kb on - strand at 2924.541 kb on - strand at 2924.541 kb on - strand at 2924.578 kb on - strand at 2924.578 kb on - strand at 2924.578 kb on - strand at 2924.668 kb on + strand at 2924.668 kb on + strand at 2924.668 kb on + strand at 2924.669 kb on - strand at 2924.669 kb on - strand at 2924.669 kb on - strand at 2924.756 kb on + strand at 2924.774 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 2,922,023 + ABID97_RS14080 0.52 +0.3 2,922,023 + ABID97_RS14080 0.52 +0.5 2,922,024 - ABID97_RS14080 0.52 -0.3 2,922,107 + ABID97_RS14080 0.56 +0.4 2,922,308 + ABID97_RS14080 0.66 +1.1 2,922,309 - ABID97_RS14080 0.66 +0.0 2,922,309 - ABID97_RS14080 0.66 +0.5 2,922,309 - ABID97_RS14080 0.66 +0.1 2,922,309 - ABID97_RS14080 0.66 +0.2 2,922,318 - ABID97_RS14080 0.66 -0.6 2,922,368 + ABID97_RS14080 0.69 +0.0 2,922,368 + ABID97_RS14080 0.69 -0.1 2,922,368 + ABID97_RS14080 0.69 -0.1 2,922,369 - ABID97_RS14080 0.69 +0.2 2,922,395 + ABID97_RS14080 0.70 +0.1 2,922,395 + ABID97_RS14080 0.70 +1.7 2,922,483 - ABID97_RS14080 0.74 +0.3 2,922,483 - ABID97_RS14080 0.74 +0.2 2,922,485 + ABID97_RS14080 0.74 +1.0 2,922,486 - ABID97_RS14080 0.74 +0.5 2,922,486 - ABID97_RS14080 0.74 -0.3 2,922,680 + ABID97_RS14080 0.84 +0.0 2,922,680 + ABID97_RS14080 0.84 -0.0 2,922,680 + ABID97_RS14080 0.84 +1.4 2,922,680 + ABID97_RS14080 0.84 +0.4 2,922,681 - ABID97_RS14080 0.84 -0.4 2,922,681 - ABID97_RS14080 0.84 -0.3 2,922,689 + ABID97_RS14080 0.84 +0.9 2,922,690 - ABID97_RS14080 0.84 -0.2 2,922,752 + ABID97_RS14080 0.87 +0.2 2,922,752 + ABID97_RS14080 0.87 -0.0 2,922,753 - ABID97_RS14080 0.88 +1.3 2,923,884 + -0.0 2,923,884 + -0.1 2,923,937 - -0.1 2,923,944 - -2.1 2,923,944 - -0.3 2,923,944 - -0.5 2,924,477 + ABID97_RS14090 0.85 -1.0 2,924,478 - ABID97_RS14090 0.85 -0.1 2,924,516 - -2.8 2,924,540 + -1.0 2,924,540 + -2.6 2,924,540 + -1.3 2,924,540 + -0.8 2,924,541 - -4.2 2,924,541 - -0.3 2,924,541 - -4.0 2,924,541 - -1.8 2,924,541 - -2.6 2,924,541 - -2.4 2,924,541 - -1.7 2,924,578 - -0.0 2,924,578 - -1.1 2,924,578 - +0.2 2,924,668 + -0.8 2,924,668 + -0.8 2,924,668 + -2.0 2,924,669 - -1.6 2,924,669 - -1.4 2,924,669 - -2.1 2,924,756 + -0.5 2,924,774 - -1.1
Or see this region's nucleotide sequence