Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS07865 and ABID97_RS07870 are separated by 63 nucleotides ABID97_RS07870 and ABID97_RS07875 are separated by 15 nucleotides ABID97_RS07875 and ABID97_RS07880 are separated by 41 nucleotides
ABID97_RS07865: ABID97_RS07865 - CDP-6-deoxy-delta-3,4-glucoseen reductase, at 1,653,062 to 1,654,126
_RS07865
ABID97_RS07870: ABID97_RS07870 - SDR family oxidoreductase, at 1,654,190 to 1,655,122
_RS07870
ABID97_RS07875: ABID97_RS07875 - tRNA-Leu, at 1,655,138 to 1,655,222
_RS07875
ABID97_RS07880: ABID97_RS07880 - cysteine synthase CysM, at 1,655,264 to 1,656,166
_RS07880
Position (kb)
1654
1655
1656 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1653.348 kb on + strand, within ABID97_RS07865 at 1653.348 kb on + strand, within ABID97_RS07865 at 1653.348 kb on + strand, within ABID97_RS07865 at 1653.349 kb on - strand, within ABID97_RS07865 at 1653.349 kb on - strand, within ABID97_RS07865 at 1653.378 kb on + strand, within ABID97_RS07865 at 1653.378 kb on + strand, within ABID97_RS07865 at 1653.378 kb on + strand, within ABID97_RS07865 at 1653.378 kb on + strand, within ABID97_RS07865 at 1653.378 kb on + strand, within ABID97_RS07865 at 1653.655 kb on - strand, within ABID97_RS07865 at 1653.655 kb on - strand, within ABID97_RS07865 at 1653.693 kb on + strand, within ABID97_RS07865 at 1653.694 kb on - strand, within ABID97_RS07865 at 1653.999 kb on + strand, within ABID97_RS07865 at 1653.999 kb on + strand, within ABID97_RS07865 at 1654.000 kb on - strand, within ABID97_RS07865 at 1654.130 kb on + strand at 1654.204 kb on + strand at 1654.204 kb on + strand at 1654.204 kb on + strand at 1654.550 kb on + strand, within ABID97_RS07870 at 1654.551 kb on - strand, within ABID97_RS07870 at 1654.724 kb on + strand, within ABID97_RS07870 at 1654.724 kb on + strand, within ABID97_RS07870 at 1654.724 kb on + strand, within ABID97_RS07870 at 1654.725 kb on - strand, within ABID97_RS07870 at 1654.725 kb on - strand, within ABID97_RS07870 at 1654.725 kb on - strand, within ABID97_RS07870 at 1654.725 kb on - strand, within ABID97_RS07870 at 1654.725 kb on - strand, within ABID97_RS07870 at 1654.725 kb on - strand, within ABID97_RS07870 at 1654.725 kb on - strand, within ABID97_RS07870 at 1654.725 kb on - strand, within ABID97_RS07870 at 1654.922 kb on + strand, within ABID97_RS07870 at 1654.923 kb on - strand, within ABID97_RS07870 at 1654.923 kb on - strand, within ABID97_RS07870 at 1654.923 kb on - strand, within ABID97_RS07870 at 1654.946 kb on + strand, within ABID97_RS07870 at 1654.946 kb on + strand, within ABID97_RS07870 at 1654.946 kb on + strand, within ABID97_RS07870
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 1,653,348 + ABID97_RS07865 0.27 -0.4 1,653,348 + ABID97_RS07865 0.27 -0.7 1,653,348 + ABID97_RS07865 0.27 -0.4 1,653,349 - ABID97_RS07865 0.27 -1.4 1,653,349 - ABID97_RS07865 0.27 +0.5 1,653,378 + ABID97_RS07865 0.30 -0.6 1,653,378 + ABID97_RS07865 0.30 +0.3 1,653,378 + ABID97_RS07865 0.30 -0.9 1,653,378 + ABID97_RS07865 0.30 -0.1 1,653,378 + ABID97_RS07865 0.30 +1.8 1,653,655 - ABID97_RS07865 0.56 -0.5 1,653,655 - ABID97_RS07865 0.56 -0.3 1,653,693 + ABID97_RS07865 0.59 +0.3 1,653,694 - ABID97_RS07865 0.59 -0.4 1,653,999 + ABID97_RS07865 0.88 -0.3 1,653,999 + ABID97_RS07865 0.88 +0.0 1,654,000 - ABID97_RS07865 0.88 -0.2 1,654,130 + -0.0 1,654,204 + -0.8 1,654,204 + +2.5 1,654,204 + -2.5 1,654,550 + ABID97_RS07870 0.39 -1.4 1,654,551 - ABID97_RS07870 0.39 -2.4 1,654,724 + ABID97_RS07870 0.57 -1.0 1,654,724 + ABID97_RS07870 0.57 -1.2 1,654,724 + ABID97_RS07870 0.57 -1.6 1,654,725 - ABID97_RS07870 0.57 -0.5 1,654,725 - ABID97_RS07870 0.57 -1.5 1,654,725 - ABID97_RS07870 0.57 -1.2 1,654,725 - ABID97_RS07870 0.57 -1.1 1,654,725 - ABID97_RS07870 0.57 -0.4 1,654,725 - ABID97_RS07870 0.57 -1.1 1,654,725 - ABID97_RS07870 0.57 -1.2 1,654,725 - ABID97_RS07870 0.57 -1.4 1,654,922 + ABID97_RS07870 0.78 -0.7 1,654,923 - ABID97_RS07870 0.79 -1.4 1,654,923 - ABID97_RS07870 0.79 -1.7 1,654,923 - ABID97_RS07870 0.79 -1.6 1,654,946 + ABID97_RS07870 0.81 -1.3 1,654,946 + ABID97_RS07870 0.81 +0.0 1,654,946 + ABID97_RS07870 0.81 -0.6
Or see this region's nucleotide sequence