Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS06860 and ABID97_RS06865 overlap by 4 nucleotides ABID97_RS06865 and ABID97_RS06870 are separated by 41 nucleotides
ABID97_RS06860: ABID97_RS06860 - ABC transporter permease, at 1,448,697 to 1,449,743
_RS06860
ABID97_RS06865: ABID97_RS06865 - galactofuranose ABC transporter, permease protein YjfF, at 1,449,740 to 1,450,768
_RS06865
ABID97_RS06870: ABID97_RS06870 - IlvD/Edd family dehydratase, at 1,450,810 to 1,452,561
_RS06870
Position (kb)
1449
1450
1451 Strain fitness (log2 ratio)
-1
0
1 at 1448.838 kb on + strand, within ABID97_RS06860 at 1449.192 kb on + strand, within ABID97_RS06860 at 1449.192 kb on + strand, within ABID97_RS06860 at 1449.193 kb on - strand, within ABID97_RS06860 at 1449.280 kb on - strand, within ABID97_RS06860 at 1449.390 kb on + strand, within ABID97_RS06860 at 1449.390 kb on + strand, within ABID97_RS06860 at 1449.591 kb on + strand, within ABID97_RS06860 at 1449.592 kb on - strand, within ABID97_RS06860 at 1449.824 kb on + strand at 1450.092 kb on + strand, within ABID97_RS06865 at 1450.206 kb on - strand, within ABID97_RS06865 at 1450.379 kb on + strand, within ABID97_RS06865 at 1450.502 kb on + strand, within ABID97_RS06865 at 1450.503 kb on - strand, within ABID97_RS06865 at 1450.503 kb on - strand, within ABID97_RS06865 at 1450.503 kb on - strand, within ABID97_RS06865 at 1450.503 kb on - strand, within ABID97_RS06865 at 1450.601 kb on + strand, within ABID97_RS06865 at 1450.886 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 1,448,838 + ABID97_RS06860 0.13 -0.4 1,449,192 + ABID97_RS06860 0.47 +0.2 1,449,192 + ABID97_RS06860 0.47 -0.8 1,449,193 - ABID97_RS06860 0.47 +0.2 1,449,280 - ABID97_RS06860 0.56 +0.3 1,449,390 + ABID97_RS06860 0.66 -0.1 1,449,390 + ABID97_RS06860 0.66 +1.6 1,449,591 + ABID97_RS06860 0.85 -0.3 1,449,592 - ABID97_RS06860 0.85 +0.1 1,449,824 + -1.6 1,450,092 + ABID97_RS06865 0.34 +1.0 1,450,206 - ABID97_RS06865 0.45 +0.3 1,450,379 + ABID97_RS06865 0.62 -0.6 1,450,502 + ABID97_RS06865 0.74 +0.2 1,450,503 - ABID97_RS06865 0.74 -0.3 1,450,503 - ABID97_RS06865 0.74 +0.1 1,450,503 - ABID97_RS06865 0.74 +0.7 1,450,503 - ABID97_RS06865 0.74 -0.4 1,450,601 + ABID97_RS06865 0.84 +0.5 1,450,886 - -0.1
Or see this region's nucleotide sequence