Strain Fitness in Variovorax sp. OAS795 around ABID97_RS05690

Experiment: L-Phenylalanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine (C)
1,198,101	+		ABID97_RS05685	0.55	+0.5
1,198,101	+		ABID97_RS05685	0.55	-0.1
1,198,102	-		ABID97_RS05685	0.55	+0.9
1,198,102	-		ABID97_RS05685	0.55	+0.2
1,198,102	-		ABID97_RS05685	0.55	+0.4
1,198,102	-		ABID97_RS05685	0.55	+1.2
1,198,102	-		ABID97_RS05685	0.55	+0.8
1,198,102	-		ABID97_RS05685	0.55	+0.4
1,198,219	-		ABID97_RS05685	0.61	+1.2
1,198,284	+		ABID97_RS05685	0.64	+0.7
1,198,284	+		ABID97_RS05685	0.64	-0.5
1,198,284	+		ABID97_RS05685	0.64	+1.0
1,198,285	-		ABID97_RS05685	0.64	+0.5
1,198,285	-		ABID97_RS05685	0.64	+0.6
1,198,285	-		ABID97_RS05685	0.64	+0.5
1,198,446	+		ABID97_RS05685	0.72	+0.2
1,198,447	-		ABID97_RS05685	0.72	+0.3
1,198,554	+		ABID97_RS05685	0.78	+0.2
1,198,554	+		ABID97_RS05685	0.78	+0.2
1,198,554	+		ABID97_RS05685	0.78	+2.0
1,198,554	+		ABID97_RS05685	0.78	+0.8
1,198,554	+		ABID97_RS05685	0.78	+0.7
1,198,635	+		ABID97_RS05685	0.82	+0.5
1,198,635	+		ABID97_RS05685	0.82	+1.2
1,198,635	+		ABID97_RS05685	0.82	+0.4
1,198,635	+		ABID97_RS05685	0.82	+0.4
1,198,636	-		ABID97_RS05685	0.82	+1.0
1,198,636	-		ABID97_RS05685	0.82	+0.5
1,198,675	-		ABID97_RS05685	0.84	+0.4
1,198,878	+				+0.8
1,198,878	+				+0.5
1,198,878	+				+0.4
1,198,878	+				+0.9
1,198,878	+				+0.4
1,198,879	-				+0.6
1,198,879	-				+0.1
1,198,879	-				+1.7
1,198,879	-				+0.6
1,198,879	-				+0.7
1,198,879	-				+0.1
1,198,879	-				+0.8
1,198,955	+				+0.6
1,198,955	+				+0.8
1,198,955	+				+0.7
1,198,955	+				+0.7
1,198,956	-				-0.2
1,198,956	-				+0.7
1,198,975	+				+0.2
1,198,975	+				+0.4
1,198,975	+				+0.1
1,198,975	+				-0.2
1,198,976	-				+0.8
1,198,976	-				+0.2
1,199,030	+				+1.6
1,199,030	+				+0.3
1,199,030	+				+1.0
1,199,030	+				+1.9
1,199,030	+				+1.3
1,199,030	+				+1.3
1,199,030	+				+1.2
1,199,031	-				+0.9
1,199,216	+		ABID97_RS05690	0.27	+1.0
1,199,282	+		ABID97_RS05690	0.35	+1.3
1,199,282	+		ABID97_RS05690	0.35	+1.3
1,199,282	+		ABID97_RS05690	0.35	+1.4
1,199,282	+		ABID97_RS05690	0.35	+1.0
1,199,283	-		ABID97_RS05690	0.35	+1.6
1,199,283	-		ABID97_RS05690	0.35	+0.8
1,199,283	-		ABID97_RS05690	0.35	+1.3
1,199,283	-		ABID97_RS05690	0.35	+1.1
1,199,283	-		ABID97_RS05690	0.35	+1.3
1,199,283	-		ABID97_RS05690	0.35	+1.3
1,199,291	+		ABID97_RS05690	0.36	+1.2
1,199,291	+		ABID97_RS05690	0.36	+1.2
1,199,292	-		ABID97_RS05690	0.36	+1.4
1,199,366	+		ABID97_RS05690	0.44	+1.8
1,199,367	-		ABID97_RS05690	0.44	+1.3
1,199,560	+		ABID97_RS05690	0.66	+1.3
1,199,560	+		ABID97_RS05690	0.66	+1.2
1,199,561	-		ABID97_RS05690	0.67	+2.4
1,199,852	+				+0.1
1,199,852	+				-0.8
1,199,852	+				-0.0
1,199,853	-				+0.4
1,199,922	+				+0.7
1,199,922	+				+0.0
1,199,922	+				+0.7
1,199,922	+				-1.0
1,199,922	+				-0.1
1,199,922	+				+0.1
1,199,923	-				+0.1
1,199,923	-				+0.2
1,199,923	-				+1.1
1,199,923	-				+0.1
1,199,923	-				+0.1
1,199,923	-				+0.0
1,199,923	-				-0.2
1,199,923	-				-0.1
1,199,923	-				+0.0
1,199,923	-				-2.2
1,199,923	-				+1.0
1,199,928	+				+0.4
1,199,928	+				-0.1
1,199,928	+				+0.3
1,199,928	+				+0.2
1,199,929	-				-0.4
1,199,930	+				-0.1
1,199,930	+				+0.2
1,199,930	+				-0.5
1,199,931	-				-0.1
1,199,931	-				+0.2
1,199,931	-				+2.0
1,199,931	-				-0.3
1,199,990	-				+0.1
1,199,990	-				-0.0
1,200,075	+		ABID97_RS05695	0.20	+0.0
1,200,108	+		ABID97_RS05695	0.24	-0.2
1,200,109	-		ABID97_RS05695	0.25	+0.5
1,200,109	-		ABID97_RS05695	0.25	+0.2
1,200,154	+		ABID97_RS05695	0.31	+0.1
1,200,154	+		ABID97_RS05695	0.31	+0.9
1,200,154	+		ABID97_RS05695	0.31	-0.2
1,200,154	+		ABID97_RS05695	0.31	+0.1
1,200,154	+		ABID97_RS05695	0.31	+0.4
1,200,154	+		ABID97_RS05695	0.31	-0.1
1,200,154	+		ABID97_RS05695	0.31	+0.5
1,200,154	+		ABID97_RS05695	0.31	+0.4
1,200,154	+		ABID97_RS05695	0.31	+0.7
1,200,154	+		ABID97_RS05695	0.31	-0.6
1,200,155	-		ABID97_RS05695	0.31	-0.0
1,200,155	-		ABID97_RS05695	0.31	+0.5
1,200,155	-		ABID97_RS05695	0.31	+0.3
1,200,313	+		ABID97_RS05695	0.52	+0.1
1,200,313	+		ABID97_RS05695	0.52	+0.4
1,200,313	+		ABID97_RS05695	0.52	-0.3
1,200,313	+		ABID97_RS05695	0.52	-0.1
1,200,313	+		ABID97_RS05695	0.52	-0.5
1,200,314	-		ABID97_RS05695	0.52	+0.8
1,200,314	-		ABID97_RS05695	0.52	+0.2
1,200,314	-		ABID97_RS05695	0.52	+0.2
1,200,314	-		ABID97_RS05695	0.52	+0.5
1,200,314	-		ABID97_RS05695	0.52	-1.9
1,200,314	-		ABID97_RS05695	0.52	-0.1
1,200,314	-		ABID97_RS05695	0.52	+0.4
1,200,314	-		ABID97_RS05695	0.52	+0.0
1,200,314	-		ABID97_RS05695	0.52	+0.2
1,200,314	-		ABID97_RS05695	0.52	-0.6
1,200,314	-		ABID97_RS05695	0.52	+0.2
1,200,314	-		ABID97_RS05695	0.52	+0.1
1,200,314	-		ABID97_RS05695	0.52	+0.3
1,200,314	-		ABID97_RS05695	0.52	+0.5
1,200,541	+		ABID97_RS05695	0.82	+0.2
1,200,542	-		ABID97_RS05695	0.82	-0.4
1,200,542	-		ABID97_RS05695	0.82	+0.1
1,200,542	-		ABID97_RS05695	0.82	+0.1
1,200,542	-		ABID97_RS05695	0.82	+0.1
1,200,542	-		ABID97_RS05695	0.82	-0.2
1,200,542	-		ABID97_RS05695	0.82	+0.2
1,200,592	+		ABID97_RS05695	0.88	-0.5
1,200,592	+		ABID97_RS05695	0.88	+0.5
1,200,592	+		ABID97_RS05695	0.88	+0.4
1,200,593	-		ABID97_RS05695	0.89	-0.3
1,200,598	+		ABID97_RS05695	0.89	-0.8
1,200,692	+				+1.3
1,200,692	+				-0.8
1,200,693	-				+0.2
1,200,757	+				-1.0
1,200,758	-				+0.2
1,200,784	+		ABID97_RS05700	0.11	+0.9
1,200,785	-		ABID97_RS05700	0.11	-0.4
1,200,785	-		ABID97_RS05700	0.11	+0.2
1,200,785	-		ABID97_RS05700	0.11	+0.7