Experiment: Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_858 and PfGW456L13_859 overlap by 4 nucleotides PfGW456L13_859 and PfGW456L13_860 are separated by 263 nucleotides PfGW456L13_860 and PfGW456L13_861 are separated by 177 nucleotides
PfGW456L13_858 - Uroporphyrinogen-III synthase (EC 4.2.1.75), at 964,293 to 965,456
_858
PfGW456L13_859 - Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives), at 965,453 to 966,691
_859
PfGW456L13_860 - Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation, at 966,955 to 967,506
_860
PfGW456L13_861 - Regulator of sigma D, at 967,684 to 968,142
_861
Position (kb) 965
966
967 Strain fitness (log2 ratio) -2
-1
0
1 at 964.499 kb on + strand, within PfGW456L13_858 at 964.642 kb on + strand, within PfGW456L13_858 at 964.643 kb on - strand, within PfGW456L13_858 at 964.643 kb on - strand, within PfGW456L13_858 at 964.813 kb on + strand, within PfGW456L13_858 at 964.977 kb on + strand, within PfGW456L13_858 at 964.977 kb on + strand, within PfGW456L13_858 at 964.977 kb on + strand, within PfGW456L13_858 at 964.978 kb on - strand, within PfGW456L13_858 at 964.978 kb on - strand, within PfGW456L13_858 at 964.978 kb on - strand, within PfGW456L13_858 at 965.068 kb on - strand, within PfGW456L13_858 at 965.206 kb on - strand, within PfGW456L13_858 at 965.465 kb on + strand at 965.465 kb on + strand at 965.465 kb on + strand at 965.466 kb on - strand at 965.466 kb on - strand at 965.466 kb on - strand at 965.549 kb on + strand at 965.550 kb on - strand at 965.584 kb on + strand, within PfGW456L13_859 at 965.585 kb on - strand, within PfGW456L13_859 at 965.813 kb on + strand, within PfGW456L13_859 at 965.814 kb on - strand, within PfGW456L13_859 at 965.814 kb on - strand, within PfGW456L13_859 at 965.816 kb on + strand, within PfGW456L13_859 at 965.817 kb on - strand, within PfGW456L13_859 at 965.817 kb on - strand, within PfGW456L13_859 at 966.275 kb on + strand, within PfGW456L13_859 at 966.276 kb on - strand, within PfGW456L13_859 at 966.276 kb on - strand, within PfGW456L13_859 at 966.350 kb on + strand, within PfGW456L13_859 at 966.350 kb on + strand, within PfGW456L13_859 at 966.374 kb on + strand, within PfGW456L13_859 at 966.374 kb on + strand, within PfGW456L13_859 at 966.480 kb on + strand, within PfGW456L13_859 at 966.480 kb on + strand, within PfGW456L13_859 at 966.480 kb on + strand, within PfGW456L13_859 at 966.480 kb on + strand, within PfGW456L13_859 at 966.481 kb on - strand, within PfGW456L13_859 at 966.481 kb on - strand, within PfGW456L13_859 at 966.518 kb on + strand, within PfGW456L13_859 at 966.518 kb on + strand, within PfGW456L13_859 at 966.540 kb on + strand, within PfGW456L13_859 at 966.773 kb on + strand at 966.773 kb on + strand at 966.774 kb on - strand at 966.774 kb on - strand at 966.774 kb on - strand at 966.774 kb on - strand at 966.774 kb on - strand at 966.816 kb on - strand at 966.825 kb on + strand at 966.825 kb on + strand at 966.825 kb on + strand at 966.825 kb on + strand at 966.826 kb on - strand at 966.826 kb on - strand at 966.826 kb on - strand at 966.826 kb on - strand at 966.826 kb on - strand at 966.826 kb on - strand at 966.832 kb on + strand at 966.833 kb on - strand at 966.860 kb on + strand at 966.860 kb on + strand at 966.861 kb on - strand at 966.919 kb on - strand at 966.923 kb on + strand at 966.937 kb on + strand at 966.938 kb on - strand at 966.938 kb on - strand at 967.027 kb on + strand, within PfGW456L13_860 at 967.027 kb on + strand, within PfGW456L13_860 at 967.028 kb on - strand, within PfGW456L13_860 at 967.028 kb on - strand, within PfGW456L13_860 at 967.028 kb on - strand, within PfGW456L13_860 at 967.030 kb on + strand, within PfGW456L13_860 at 967.030 kb on + strand, within PfGW456L13_860 at 967.031 kb on - strand, within PfGW456L13_860 at 967.039 kb on + strand, within PfGW456L13_860 at 967.039 kb on + strand, within PfGW456L13_860 at 967.039 kb on + strand, within PfGW456L13_860 at 967.039 kb on + strand, within PfGW456L13_860 at 967.040 kb on - strand, within PfGW456L13_860 at 967.159 kb on + strand, within PfGW456L13_860 at 967.159 kb on + strand, within PfGW456L13_860 at 967.159 kb on + strand, within PfGW456L13_860 at 967.159 kb on + strand, within PfGW456L13_860 at 967.307 kb on + strand, within PfGW456L13_860 at 967.308 kb on - strand, within PfGW456L13_860 at 967.423 kb on + strand, within PfGW456L13_860 at 967.505 kb on - strand at 967.514 kb on + strand at 967.514 kb on + strand at 967.514 kb on + strand at 967.515 kb on - strand at 967.515 kb on - strand at 967.515 kb on - strand at 967.515 kb on - strand at 967.515 kb on - strand at 967.515 kb on - strand at 967.515 kb on - strand at 967.524 kb on - strand at 967.524 kb on - strand at 967.534 kb on + strand at 967.534 kb on + strand at 967.535 kb on - strand at 967.561 kb on + strand at 967.589 kb on + strand at 967.589 kb on + strand at 967.589 kb on + strand at 967.589 kb on + strand at 967.589 kb on + strand at 967.589 kb on + strand at 967.589 kb on + strand at 967.589 kb on + strand at 967.589 kb on + strand at 967.589 kb on + strand at 967.590 kb on - strand at 967.590 kb on - strand at 967.590 kb on - strand at 967.590 kb on - strand at 967.590 kb on - strand at 967.590 kb on - strand at 967.590 kb on - strand at 967.630 kb on + strand at 967.630 kb on + strand at 967.630 kb on + strand at 967.630 kb on + strand at 967.630 kb on + strand at 967.631 kb on - strand at 967.631 kb on - strand at 967.631 kb on - strand at 967.631 kb on - strand at 967.649 kb on + strand at 967.650 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.002 mg/ml remove 964,499 + PfGW456L13_858 0.18 +0.8 964,642 + PfGW456L13_858 0.30 +0.2 964,643 - PfGW456L13_858 0.30 -0.6 964,643 - PfGW456L13_858 0.30 +0.1 964,813 + PfGW456L13_858 0.45 -0.7 964,977 + PfGW456L13_858 0.59 +0.4 964,977 + PfGW456L13_858 0.59 -0.8 964,977 + PfGW456L13_858 0.59 -1.0 964,978 - PfGW456L13_858 0.59 -1.2 964,978 - PfGW456L13_858 0.59 -0.6 964,978 - PfGW456L13_858 0.59 +0.4 965,068 - PfGW456L13_858 0.67 -1.7 965,206 - PfGW456L13_858 0.78 -1.3 965,465 + -0.2 965,465 + -0.6 965,465 + -0.3 965,466 - -0.4 965,466 - -0.1 965,466 - +1.3 965,549 + -0.4 965,550 - -1.3 965,584 + PfGW456L13_859 0.11 +0.2 965,585 - PfGW456L13_859 0.11 -2.3 965,813 + PfGW456L13_859 0.29 -0.7 965,814 - PfGW456L13_859 0.29 +0.1 965,814 - PfGW456L13_859 0.29 -0.1 965,816 + PfGW456L13_859 0.29 +0.2 965,817 - PfGW456L13_859 0.29 -1.6 965,817 - PfGW456L13_859 0.29 -1.7 966,275 + PfGW456L13_859 0.66 -1.1 966,276 - PfGW456L13_859 0.66 -1.2 966,276 - PfGW456L13_859 0.66 -1.3 966,350 + PfGW456L13_859 0.72 -1.4 966,350 + PfGW456L13_859 0.72 +0.1 966,374 + PfGW456L13_859 0.74 +0.6 966,374 + PfGW456L13_859 0.74 +0.2 966,480 + PfGW456L13_859 0.83 +0.1 966,480 + PfGW456L13_859 0.83 -1.4 966,480 + PfGW456L13_859 0.83 -0.7 966,480 + PfGW456L13_859 0.83 -0.2 966,481 - PfGW456L13_859 0.83 -1.3 966,481 - PfGW456L13_859 0.83 +1.3 966,518 + PfGW456L13_859 0.86 +0.5 966,518 + PfGW456L13_859 0.86 +0.5 966,540 + PfGW456L13_859 0.88 +0.2 966,773 + +1.0 966,773 + +0.1 966,774 - +0.2 966,774 - -0.4 966,774 - +0.2 966,774 - +0.3 966,774 - +0.8 966,816 - -0.5 966,825 + -0.6 966,825 + +0.7 966,825 + +0.5 966,825 + -0.7 966,826 - +0.2 966,826 - -0.4 966,826 - -0.0 966,826 - -0.0 966,826 - -0.2 966,826 - -0.5 966,832 + +1.6 966,833 - -0.4 966,860 + +0.0 966,860 + -0.7 966,861 - +0.3 966,919 - +0.3 966,923 + -0.5 966,937 + +0.4 966,938 - +0.1 966,938 - -0.2 967,027 + PfGW456L13_860 0.13 +0.1 967,027 + PfGW456L13_860 0.13 -0.6 967,028 - PfGW456L13_860 0.13 -0.0 967,028 - PfGW456L13_860 0.13 -0.1 967,028 - PfGW456L13_860 0.13 -0.9 967,030 + PfGW456L13_860 0.14 -0.3 967,030 + PfGW456L13_860 0.14 +0.4 967,031 - PfGW456L13_860 0.14 -0.0 967,039 + PfGW456L13_860 0.15 -1.3 967,039 + PfGW456L13_860 0.15 +0.5 967,039 + PfGW456L13_860 0.15 +0.6 967,039 + PfGW456L13_860 0.15 -0.6 967,040 - PfGW456L13_860 0.15 +0.2 967,159 + PfGW456L13_860 0.37 +1.1 967,159 + PfGW456L13_860 0.37 -1.7 967,159 + PfGW456L13_860 0.37 +1.1 967,159 + PfGW456L13_860 0.37 +0.8 967,307 + PfGW456L13_860 0.64 +0.3 967,308 - PfGW456L13_860 0.64 +0.4 967,423 + PfGW456L13_860 0.85 -0.3 967,505 - +0.3 967,514 + +0.1 967,514 + +0.9 967,514 + -0.5 967,515 - +0.6 967,515 - +0.5 967,515 - -0.2 967,515 - -0.3 967,515 - +0.9 967,515 - +0.6 967,515 - -0.4 967,524 - +0.3 967,524 - -1.7 967,534 + -0.0 967,534 + -1.1 967,535 - -0.3 967,561 + +0.2 967,589 + +0.1 967,589 + +0.3 967,589 + +1.6 967,589 + -0.1 967,589 + +0.1 967,589 + -0.2 967,589 + -1.2 967,589 + +0.1 967,589 + +0.3 967,589 + -0.5 967,590 - +0.1 967,590 - +0.3 967,590 - -0.2 967,590 - +0.5 967,590 - +1.6 967,590 - -0.7 967,590 - +0.5 967,630 + +0.3 967,630 + -0.2 967,630 + -0.6 967,630 + +0.5 967,630 + +0.2 967,631 - +1.0 967,631 - +1.4 967,631 - +0.9 967,631 - +0.5 967,649 + +0.5 967,650 - +0.3
Or see this region's nucleotide sequence