Experiment: Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_838 and PfGW456L13_839 are separated by 213 nucleotides PfGW456L13_839 and PfGW456L13_840 are separated by 101 nucleotides PfGW456L13_840 and PfGW456L13_841 are separated by 186 nucleotides
PfGW456L13_838 - Ammonium transporter, at 946,492 to 947,829
_838
PfGW456L13_839 - FIG004064: hypothetical protein, at 948,043 to 948,468
_839
PfGW456L13_840 - FIG00953808: hypothetical protein, at 948,570 to 948,893
_840
PfGW456L13_841 - Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase, at 949,080 to 949,787
_841
Position (kb) 948
949 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 947.132 kb on + strand, within PfGW456L13_838 at 947.133 kb on - strand, within PfGW456L13_838 at 947.133 kb on - strand, within PfGW456L13_838 at 947.133 kb on - strand, within PfGW456L13_838 at 947.133 kb on - strand, within PfGW456L13_838 at 947.212 kb on + strand, within PfGW456L13_838 at 947.213 kb on - strand, within PfGW456L13_838 at 947.383 kb on - strand, within PfGW456L13_838 at 947.471 kb on + strand, within PfGW456L13_838 at 947.471 kb on + strand, within PfGW456L13_838 at 947.701 kb on + strand at 947.701 kb on + strand at 947.701 kb on + strand at 947.701 kb on + strand at 947.701 kb on + strand at 947.701 kb on + strand at 947.701 kb on + strand at 947.701 kb on + strand at 947.701 kb on + strand at 947.702 kb on - strand at 947.702 kb on - strand at 947.702 kb on - strand at 947.702 kb on - strand at 947.702 kb on - strand at 947.715 kb on + strand at 947.715 kb on + strand at 947.715 kb on + strand at 947.715 kb on + strand at 947.715 kb on + strand at 947.716 kb on - strand at 947.716 kb on - strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.719 kb on + strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.720 kb on - strand at 947.760 kb on + strand at 947.818 kb on + strand at 947.827 kb on + strand at 947.827 kb on + strand at 947.827 kb on + strand at 947.827 kb on + strand at 947.827 kb on + strand at 947.827 kb on + strand at 947.827 kb on + strand at 947.828 kb on - strand at 947.828 kb on - strand at 947.828 kb on - strand at 947.828 kb on - strand at 947.828 kb on - strand at 947.828 kb on - strand at 947.924 kb on + strand at 947.924 kb on + strand at 947.924 kb on + strand at 947.924 kb on + strand at 947.924 kb on + strand at 947.924 kb on + strand at 947.924 kb on + strand at 947.925 kb on - strand at 947.925 kb on - strand at 947.925 kb on - strand at 947.933 kb on + strand at 947.933 kb on + strand at 947.933 kb on + strand at 947.933 kb on + strand at 947.933 kb on + strand at 947.934 kb on - strand at 947.934 kb on - strand at 947.934 kb on - strand at 947.934 kb on - strand at 947.964 kb on + strand at 947.964 kb on + strand at 947.964 kb on + strand at 947.965 kb on - strand at 947.980 kb on + strand at 947.980 kb on + strand at 947.980 kb on + strand at 947.980 kb on + strand at 947.980 kb on + strand at 947.980 kb on + strand at 947.981 kb on - strand at 947.981 kb on - strand at 947.983 kb on + strand at 948.042 kb on + strand at 948.042 kb on + strand at 948.042 kb on + strand at 948.042 kb on + strand at 948.042 kb on + strand at 948.042 kb on + strand at 948.043 kb on - strand at 948.043 kb on - strand at 948.043 kb on - strand at 948.043 kb on - strand at 948.043 kb on - strand at 948.043 kb on - strand at 948.043 kb on - strand at 948.043 kb on - strand at 948.043 kb on - strand at 948.043 kb on - strand at 948.043 kb on - strand at 948.043 kb on - strand at 948.043 kb on - strand at 948.098 kb on + strand, within PfGW456L13_839 at 948.110 kb on + strand, within PfGW456L13_839 at 948.174 kb on + strand, within PfGW456L13_839 at 948.174 kb on + strand, within PfGW456L13_839 at 948.174 kb on + strand, within PfGW456L13_839 at 948.174 kb on + strand, within PfGW456L13_839 at 948.174 kb on + strand, within PfGW456L13_839 at 948.175 kb on - strand, within PfGW456L13_839 at 948.175 kb on - strand, within PfGW456L13_839 at 948.219 kb on - strand, within PfGW456L13_839 at 948.275 kb on - strand, within PfGW456L13_839 at 948.397 kb on + strand, within PfGW456L13_839 at 948.397 kb on + strand, within PfGW456L13_839 at 948.532 kb on + strand at 948.532 kb on + strand at 948.532 kb on + strand at 948.533 kb on - strand at 948.533 kb on - strand at 948.533 kb on - strand at 948.534 kb on + strand at 948.534 kb on + strand at 948.534 kb on + strand at 948.534 kb on + strand at 948.534 kb on + strand at 948.534 kb on + strand at 948.534 kb on + strand at 948.535 kb on - strand at 948.535 kb on - strand at 948.535 kb on - strand at 948.535 kb on - strand at 948.535 kb on - strand at 948.535 kb on - strand at 948.538 kb on + strand at 948.538 kb on + strand at 948.538 kb on + strand at 948.538 kb on + strand at 948.538 kb on + strand at 948.538 kb on + strand at 948.539 kb on - strand at 948.539 kb on - strand at 948.564 kb on + strand at 948.564 kb on + strand at 948.564 kb on + strand at 948.565 kb on - strand at 948.565 kb on - strand at 948.565 kb on - strand at 948.565 kb on - strand at 948.607 kb on + strand, within PfGW456L13_840 at 948.873 kb on + strand at 948.873 kb on + strand at 948.874 kb on - strand at 948.888 kb on - strand at 948.908 kb on + strand at 949.026 kb on + strand at 949.026 kb on + strand at 949.026 kb on + strand at 949.026 kb on + strand at 949.027 kb on - strand at 949.039 kb on - strand at 949.039 kb on - strand at 949.363 kb on + strand, within PfGW456L13_841 at 949.364 kb on - strand, within PfGW456L13_841 at 949.364 kb on - strand, within PfGW456L13_841
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.002 mg/ml remove 947,132 + PfGW456L13_838 0.48 -0.7 947,133 - PfGW456L13_838 0.48 +0.2 947,133 - PfGW456L13_838 0.48 +0.1 947,133 - PfGW456L13_838 0.48 -0.1 947,133 - PfGW456L13_838 0.48 -1.0 947,212 + PfGW456L13_838 0.54 -0.8 947,213 - PfGW456L13_838 0.54 +0.8 947,383 - PfGW456L13_838 0.67 +0.9 947,471 + PfGW456L13_838 0.73 -0.1 947,471 + PfGW456L13_838 0.73 +0.5 947,701 + -0.1 947,701 + +0.9 947,701 + +0.2 947,701 + -0.1 947,701 + +0.0 947,701 + +0.0 947,701 + +0.3 947,701 + +0.2 947,701 + -1.5 947,702 - +1.9 947,702 - -0.1 947,702 - -0.3 947,702 - -0.6 947,702 - +0.7 947,715 + -0.8 947,715 + +1.2 947,715 + -1.6 947,715 + +0.1 947,715 + -0.3 947,716 - +0.6 947,716 - -0.8 947,719 + +0.2 947,719 + +0.3 947,719 + +0.4 947,719 + +0.4 947,719 + -0.2 947,719 + +0.4 947,719 + -0.5 947,719 + -0.1 947,719 + -1.3 947,719 + +0.7 947,719 + +0.4 947,719 + -0.0 947,719 + +0.4 947,719 + +0.0 947,719 + +0.5 947,719 + -1.3 947,719 + +0.2 947,719 + +0.7 947,719 + -0.6 947,719 + -1.3 947,719 + -0.8 947,719 + -0.6 947,719 + -0.3 947,719 + +0.4 947,719 + -0.4 947,719 + +0.1 947,719 + -0.8 947,719 + -0.2 947,719 + +0.4 947,719 + -0.3 947,719 + -0.5 947,719 + +0.6 947,719 + -0.6 947,719 + -0.7 947,719 + +1.0 947,719 + +1.0 947,719 + +0.1 947,719 + +0.0 947,719 + -0.1 947,719 + -0.3 947,719 + +0.4 947,720 - +0.0 947,720 - -1.5 947,720 - -0.4 947,720 - +1.1 947,720 - +0.2 947,720 - +0.5 947,720 - +0.6 947,720 - -0.1 947,720 - +0.0 947,720 - -0.2 947,720 - +0.1 947,720 - +0.6 947,720 - -0.2 947,720 - +0.8 947,720 - +0.3 947,720 - -0.4 947,720 - -0.1 947,720 - -0.5 947,720 - -0.7 947,720 - +1.3 947,720 - +0.3 947,720 - +0.0 947,720 - +0.0 947,720 - +0.3 947,720 - +0.5 947,720 - -0.5 947,720 - +0.3 947,720 - +1.0 947,720 - +0.2 947,720 - +0.4 947,720 - -0.7 947,720 - +0.7 947,720 - -0.5 947,720 - +0.4 947,720 - -0.7 947,720 - +0.7 947,720 - +1.1 947,720 - +0.3 947,720 - +1.0 947,720 - +1.0 947,720 - +0.6 947,760 + +0.2 947,818 + -0.2 947,827 + +0.8 947,827 + +0.7 947,827 + -0.2 947,827 + +0.0 947,827 + +0.9 947,827 + -0.7 947,827 + -0.5 947,828 - +0.4 947,828 - +0.6 947,828 - +0.5 947,828 - +0.8 947,828 - -0.6 947,828 - -0.1 947,924 + -0.7 947,924 + -0.2 947,924 + -1.1 947,924 + +0.2 947,924 + -1.4 947,924 + -0.3 947,924 + +0.5 947,925 - +0.2 947,925 - -0.0 947,925 - +0.2 947,933 + -0.3 947,933 + -0.6 947,933 + +0.9 947,933 + -0.4 947,933 + -0.7 947,934 - +0.1 947,934 - +0.3 947,934 - +0.2 947,934 - -0.1 947,964 + -0.2 947,964 + -0.6 947,964 + -0.4 947,965 - -0.6 947,980 + -0.5 947,980 + -0.3 947,980 + +0.8 947,980 + +0.4 947,980 + -0.2 947,980 + -0.2 947,981 - +0.0 947,981 - +0.5 947,983 + -0.8 948,042 + -0.3 948,042 + -0.9 948,042 + -0.6 948,042 + +0.3 948,042 + +0.5 948,042 + -0.0 948,043 - +0.6 948,043 - +0.9 948,043 - -0.1 948,043 - +0.8 948,043 - +0.1 948,043 - +0.4 948,043 - +0.8 948,043 - +0.7 948,043 - -0.2 948,043 - +0.8 948,043 - +0.3 948,043 - -0.6 948,043 - +0.4 948,098 + PfGW456L13_839 0.13 -3.4 948,110 + PfGW456L13_839 0.16 -0.0 948,174 + PfGW456L13_839 0.31 -0.7 948,174 + PfGW456L13_839 0.31 +1.3 948,174 + PfGW456L13_839 0.31 +1.1 948,174 + PfGW456L13_839 0.31 -1.5 948,174 + PfGW456L13_839 0.31 +0.0 948,175 - PfGW456L13_839 0.31 -1.7 948,175 - PfGW456L13_839 0.31 -2.4 948,219 - PfGW456L13_839 0.41 -0.1 948,275 - PfGW456L13_839 0.54 -1.2 948,397 + PfGW456L13_839 0.83 -0.8 948,397 + PfGW456L13_839 0.83 -0.5 948,532 + -0.3 948,532 + +0.6 948,532 + -0.2 948,533 - +1.1 948,533 - -0.5 948,533 - -0.0 948,534 + -0.6 948,534 + -0.5 948,534 + -0.3 948,534 + -0.4 948,534 + -0.2 948,534 + -0.5 948,534 + +0.4 948,535 - +0.8 948,535 - +0.0 948,535 - -1.1 948,535 - +0.1 948,535 - +0.9 948,535 - -0.9 948,538 + +0.1 948,538 + +0.0 948,538 + +0.6 948,538 + +0.1 948,538 + -0.4 948,538 + +0.6 948,539 - -0.2 948,539 - -0.7 948,564 + +1.0 948,564 + -1.0 948,564 + +1.0 948,565 - -0.6 948,565 - -0.2 948,565 - -0.3 948,565 - +1.0 948,607 + PfGW456L13_840 0.11 +0.9 948,873 + -0.1 948,873 + -0.2 948,874 - -2.0 948,888 - +1.3 948,908 + -0.3 949,026 + +0.4 949,026 + -0.3 949,026 + -0.9 949,026 + +0.2 949,027 - -0.0 949,039 - +0.7 949,039 - -0.1 949,363 + PfGW456L13_841 0.40 -0.9 949,364 - PfGW456L13_841 0.40 +0.8 949,364 - PfGW456L13_841 0.40 +0.2
Or see this region's nucleotide sequence