Experiment: Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_742 and PfGW456L13_743 are separated by 180 nucleotides PfGW456L13_743 and PfGW456L13_744 are separated by 63 nucleotides PfGW456L13_744 and PfGW456L13_745 are separated by 612 nucleotides
PfGW456L13_742 - Aspartate ammonia-lyase (EC 4.3.1.1), at 846,225 to 847,649
_742
PfGW456L13_743 - Transcriptional regulator, at 847,830 to 848,741
_743
PfGW456L13_744 - hypothetical protein, at 848,805 to 848,960
_744
PfGW456L13_745 - hypothetical protein, at 849,573 to 849,689
_745
Position (kb) 847
848
849 Strain fitness (log2 ratio) -2
-1
0
1
2 at 846.895 kb on - strand, within PfGW456L13_742 at 846.911 kb on - strand, within PfGW456L13_742 at 847.256 kb on - strand, within PfGW456L13_742 at 847.256 kb on - strand, within PfGW456L13_742 at 847.256 kb on - strand, within PfGW456L13_742 at 847.262 kb on - strand, within PfGW456L13_742 at 847.262 kb on - strand, within PfGW456L13_742 at 847.548 kb on - strand at 847.548 kb on - strand at 847.576 kb on + strand at 847.576 kb on + strand at 847.576 kb on + strand at 847.576 kb on + strand at 847.576 kb on + strand at 847.577 kb on - strand at 847.577 kb on - strand at 847.577 kb on - strand at 847.577 kb on - strand at 847.577 kb on - strand at 847.577 kb on - strand at 847.579 kb on + strand at 847.580 kb on - strand at 847.580 kb on - strand at 847.580 kb on - strand at 847.653 kb on - strand at 847.747 kb on - strand at 847.802 kb on + strand at 848.068 kb on + strand, within PfGW456L13_743 at 848.068 kb on + strand, within PfGW456L13_743 at 848.068 kb on + strand, within PfGW456L13_743 at 848.069 kb on - strand, within PfGW456L13_743 at 848.069 kb on - strand, within PfGW456L13_743 at 848.069 kb on - strand, within PfGW456L13_743 at 848.069 kb on - strand, within PfGW456L13_743 at 848.069 kb on - strand, within PfGW456L13_743 at 848.069 kb on - strand, within PfGW456L13_743 at 848.069 kb on - strand, within PfGW456L13_743 at 848.069 kb on - strand, within PfGW456L13_743 at 848.277 kb on + strand, within PfGW456L13_743 at 848.278 kb on - strand, within PfGW456L13_743 at 848.278 kb on - strand, within PfGW456L13_743 at 848.427 kb on + strand, within PfGW456L13_743 at 848.502 kb on + strand, within PfGW456L13_743 at 848.503 kb on - strand, within PfGW456L13_743 at 848.887 kb on + strand, within PfGW456L13_744 at 848.888 kb on - strand, within PfGW456L13_744 at 848.893 kb on - strand, within PfGW456L13_744 at 848.961 kb on - strand at 848.996 kb on + strand at 848.996 kb on + strand at 849.050 kb on + strand at 849.080 kb on - strand at 849.266 kb on + strand at 849.286 kb on + strand at 849.368 kb on + strand at 849.371 kb on + strand at 849.373 kb on + strand at 849.450 kb on + strand at 849.450 kb on + strand at 849.451 kb on - strand at 849.454 kb on + strand at 849.454 kb on + strand at 849.455 kb on - strand at 849.489 kb on + strand at 849.489 kb on + strand at 849.554 kb on - strand at 849.554 kb on - strand at 849.688 kb on - strand at 849.707 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.002 mg/ml remove 846,895 - PfGW456L13_742 0.47 -1.9 846,911 - PfGW456L13_742 0.48 +0.0 847,256 - PfGW456L13_742 0.72 +0.1 847,256 - PfGW456L13_742 0.72 +0.3 847,256 - PfGW456L13_742 0.72 +0.7 847,262 - PfGW456L13_742 0.73 +0.5 847,262 - PfGW456L13_742 0.73 -0.5 847,548 - +0.1 847,548 - +0.5 847,576 + +1.3 847,576 + +0.4 847,576 + +2.3 847,576 + +0.6 847,576 + -0.1 847,577 - -0.5 847,577 - -2.1 847,577 - -0.7 847,577 - -0.0 847,577 - +0.5 847,577 - +0.9 847,579 + -0.0 847,580 - +0.3 847,580 - +0.4 847,580 - +1.6 847,653 - +1.3 847,747 - -0.4 847,802 + +0.2 848,068 + PfGW456L13_743 0.26 -1.0 848,068 + PfGW456L13_743 0.26 -0.1 848,068 + PfGW456L13_743 0.26 +0.7 848,069 - PfGW456L13_743 0.26 -0.4 848,069 - PfGW456L13_743 0.26 +0.1 848,069 - PfGW456L13_743 0.26 -0.2 848,069 - PfGW456L13_743 0.26 -0.5 848,069 - PfGW456L13_743 0.26 -0.7 848,069 - PfGW456L13_743 0.26 -1.3 848,069 - PfGW456L13_743 0.26 +0.3 848,069 - PfGW456L13_743 0.26 -0.2 848,277 + PfGW456L13_743 0.49 -0.5 848,278 - PfGW456L13_743 0.49 -2.6 848,278 - PfGW456L13_743 0.49 -0.5 848,427 + PfGW456L13_743 0.65 -0.2 848,502 + PfGW456L13_743 0.74 -1.0 848,503 - PfGW456L13_743 0.74 -0.2 848,887 + PfGW456L13_744 0.53 -0.9 848,888 - PfGW456L13_744 0.53 +0.3 848,893 - PfGW456L13_744 0.56 -0.3 848,961 - -0.6 848,996 + +0.2 848,996 + +0.1 849,050 + +0.2 849,080 - -0.4 849,266 + +0.4 849,286 + -0.4 849,368 + +0.5 849,371 + +0.6 849,373 + +0.1 849,450 + +0.7 849,450 + +2.3 849,451 - -0.5 849,454 + -0.2 849,454 + -0.7 849,455 - +0.8 849,489 + +0.8 849,489 + -1.0 849,554 - +0.9 849,554 - +0.1 849,688 - +0.4 849,707 + +0.2
Or see this region's nucleotide sequence