Experiment: Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_601 and PfGW456L13_602 are separated by 367 nucleotides PfGW456L13_602 and PfGW456L13_603 overlap by 1 nucleotides PfGW456L13_603 and PfGW456L13_604 are separated by 60 nucleotides
PfGW456L13_601 - Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1), at 694,562 to 695,278
_601
PfGW456L13_602 - Methionine ABC transporter ATP-binding protein, at 695,646 to 696,653
_602
PfGW456L13_603 - Methionine ABC transporter permease protein, at 696,653 to 697,327
_603
PfGW456L13_604 - Methionine ABC transporter substrate-binding protein, at 697,388 to 698,158
_604
Position (kb) 695
696
697 Strain fitness (log2 ratio) -2
-1
0
1 at 694.680 kb on + strand, within PfGW456L13_601 at 694.680 kb on + strand, within PfGW456L13_601 at 694.680 kb on + strand, within PfGW456L13_601 at 694.680 kb on + strand, within PfGW456L13_601 at 694.681 kb on - strand, within PfGW456L13_601 at 694.681 kb on - strand, within PfGW456L13_601 at 694.681 kb on - strand, within PfGW456L13_601 at 694.681 kb on - strand, within PfGW456L13_601 at 694.681 kb on - strand, within PfGW456L13_601 at 694.681 kb on - strand, within PfGW456L13_601 at 694.681 kb on - strand, within PfGW456L13_601 at 694.681 kb on - strand, within PfGW456L13_601 at 694.782 kb on - strand, within PfGW456L13_601 at 694.782 kb on - strand, within PfGW456L13_601 at 694.805 kb on + strand, within PfGW456L13_601 at 694.805 kb on + strand, within PfGW456L13_601 at 694.806 kb on - strand, within PfGW456L13_601 at 694.806 kb on - strand, within PfGW456L13_601 at 695.048 kb on - strand, within PfGW456L13_601 at 695.057 kb on - strand, within PfGW456L13_601 at 695.143 kb on + strand, within PfGW456L13_601 at 695.143 kb on + strand, within PfGW456L13_601 at 695.144 kb on - strand, within PfGW456L13_601 at 695.150 kb on + strand, within PfGW456L13_601 at 695.259 kb on + strand at 695.259 kb on + strand at 695.259 kb on + strand at 695.260 kb on - strand at 695.260 kb on - strand at 695.260 kb on - strand at 695.260 kb on - strand at 695.260 kb on - strand at 695.260 kb on - strand at 695.260 kb on - strand at 695.269 kb on + strand at 695.270 kb on - strand at 695.270 kb on - strand at 695.291 kb on + strand at 695.291 kb on + strand at 695.291 kb on + strand at 695.291 kb on + strand at 695.292 kb on - strand at 695.292 kb on - strand at 695.292 kb on - strand at 695.348 kb on + strand at 695.348 kb on + strand at 695.348 kb on + strand at 695.349 kb on - strand at 695.349 kb on - strand at 695.349 kb on - strand at 695.349 kb on - strand at 695.353 kb on + strand at 695.353 kb on + strand at 695.353 kb on + strand at 695.354 kb on - strand at 695.354 kb on - strand at 695.354 kb on - strand at 695.354 kb on - strand at 695.354 kb on - strand at 695.528 kb on - strand at 695.550 kb on - strand at 695.556 kb on + strand at 695.563 kb on + strand at 695.563 kb on + strand at 695.564 kb on - strand at 695.573 kb on + strand at 695.573 kb on + strand at 695.574 kb on - strand at 695.574 kb on - strand at 695.575 kb on + strand at 695.586 kb on + strand at 695.586 kb on + strand at 695.587 kb on - strand at 695.622 kb on - strand at 695.643 kb on + strand at 695.644 kb on - strand at 695.644 kb on - strand at 695.670 kb on - strand at 695.670 kb on - strand at 695.670 kb on - strand at 695.677 kb on - strand at 695.677 kb on - strand at 695.677 kb on - strand at 695.745 kb on + strand at 695.746 kb on - strand at 696.469 kb on - strand, within PfGW456L13_602 at 696.469 kb on - strand, within PfGW456L13_602 at 696.513 kb on + strand, within PfGW456L13_602 at 696.513 kb on + strand, within PfGW456L13_602 at 696.513 kb on + strand, within PfGW456L13_602 at 696.514 kb on - strand, within PfGW456L13_602 at 696.514 kb on - strand, within PfGW456L13_602 at 696.830 kb on + strand, within PfGW456L13_603 at 696.830 kb on + strand, within PfGW456L13_603 at 696.830 kb on + strand, within PfGW456L13_603 at 696.830 kb on + strand, within PfGW456L13_603 at 696.831 kb on - strand, within PfGW456L13_603 at 696.831 kb on - strand, within PfGW456L13_603 at 696.831 kb on - strand, within PfGW456L13_603 at 696.964 kb on - strand, within PfGW456L13_603 at 697.060 kb on + strand, within PfGW456L13_603 at 697.060 kb on + strand, within PfGW456L13_603 at 697.061 kb on - strand, within PfGW456L13_603 at 697.061 kb on - strand, within PfGW456L13_603 at 697.061 kb on - strand, within PfGW456L13_603 at 697.061 kb on - strand, within PfGW456L13_603 at 697.138 kb on + strand, within PfGW456L13_603 at 697.138 kb on + strand, within PfGW456L13_603 at 697.138 kb on + strand, within PfGW456L13_603 at 697.138 kb on + strand, within PfGW456L13_603 at 697.138 kb on + strand, within PfGW456L13_603 at 697.139 kb on - strand, within PfGW456L13_603 at 697.139 kb on - strand, within PfGW456L13_603 at 697.139 kb on - strand, within PfGW456L13_603 at 697.139 kb on - strand, within PfGW456L13_603 at 697.151 kb on + strand, within PfGW456L13_603 at 697.152 kb on - strand, within PfGW456L13_603 at 697.266 kb on + strand at 697.267 kb on - strand at 697.278 kb on + strand at 697.279 kb on - strand at 697.325 kb on + strand at 697.325 kb on + strand at 697.325 kb on + strand at 697.325 kb on + strand at 697.326 kb on - strand at 697.326 kb on - strand at 697.326 kb on - strand at 697.382 kb on - strand at 697.382 kb on - strand at 697.382 kb on - strand at 697.382 kb on - strand at 697.382 kb on - strand at 697.382 kb on - strand at 697.382 kb on - strand at 697.382 kb on - strand at 697.399 kb on - strand at 697.542 kb on + strand, within PfGW456L13_604 at 697.542 kb on + strand, within PfGW456L13_604 at 697.542 kb on + strand, within PfGW456L13_604 at 697.543 kb on - strand, within PfGW456L13_604 at 697.543 kb on - strand, within PfGW456L13_604 at 697.543 kb on - strand, within PfGW456L13_604 at 697.546 kb on + strand, within PfGW456L13_604 at 697.546 kb on + strand, within PfGW456L13_604 at 697.547 kb on - strand, within PfGW456L13_604 at 697.553 kb on + strand, within PfGW456L13_604 at 697.553 kb on + strand, within PfGW456L13_604 at 697.553 kb on + strand, within PfGW456L13_604 at 697.553 kb on + strand, within PfGW456L13_604 at 697.553 kb on + strand, within PfGW456L13_604 at 697.553 kb on + strand, within PfGW456L13_604 at 697.553 kb on + strand, within PfGW456L13_604 at 697.554 kb on - strand, within PfGW456L13_604 at 697.554 kb on - strand, within PfGW456L13_604 at 697.554 kb on - strand, within PfGW456L13_604 at 697.554 kb on - strand, within PfGW456L13_604 at 697.554 kb on - strand, within PfGW456L13_604 at 697.619 kb on + strand, within PfGW456L13_604 at 697.620 kb on - strand, within PfGW456L13_604
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.002 mg/ml remove 694,680 + PfGW456L13_601 0.16 +1.1 694,680 + PfGW456L13_601 0.16 +0.7 694,680 + PfGW456L13_601 0.16 +0.2 694,680 + PfGW456L13_601 0.16 +0.3 694,681 - PfGW456L13_601 0.17 +0.6 694,681 - PfGW456L13_601 0.17 +1.0 694,681 - PfGW456L13_601 0.17 +0.2 694,681 - PfGW456L13_601 0.17 +0.9 694,681 - PfGW456L13_601 0.17 +0.1 694,681 - PfGW456L13_601 0.17 +0.3 694,681 - PfGW456L13_601 0.17 +0.5 694,681 - PfGW456L13_601 0.17 -0.4 694,782 - PfGW456L13_601 0.31 +0.3 694,782 - PfGW456L13_601 0.31 -1.1 694,805 + PfGW456L13_601 0.34 -0.4 694,805 + PfGW456L13_601 0.34 +0.2 694,806 - PfGW456L13_601 0.34 +0.3 694,806 - PfGW456L13_601 0.34 +0.3 695,048 - PfGW456L13_601 0.68 -0.3 695,057 - PfGW456L13_601 0.69 +0.5 695,143 + PfGW456L13_601 0.81 +0.2 695,143 + PfGW456L13_601 0.81 +0.0 695,144 - PfGW456L13_601 0.81 -0.3 695,150 + PfGW456L13_601 0.82 +0.6 695,259 + -1.0 695,259 + -0.9 695,259 + -0.5 695,260 - -0.8 695,260 - -0.5 695,260 - +0.1 695,260 - -0.0 695,260 - +0.5 695,260 - -1.0 695,260 - +0.0 695,269 + -0.7 695,270 - -0.2 695,270 - +0.3 695,291 + +0.1 695,291 + -1.6 695,291 + -0.1 695,291 + -0.0 695,292 - +0.4 695,292 - +0.4 695,292 - +0.7 695,348 + +0.6 695,348 + +1.1 695,348 + -0.2 695,349 - -0.3 695,349 - +0.8 695,349 - -1.1 695,349 - -0.5 695,353 + -0.7 695,353 + -0.1 695,353 + +0.1 695,354 - +0.1 695,354 - -0.8 695,354 - +0.2 695,354 - +0.1 695,354 - -2.1 695,528 - +0.1 695,550 - -0.9 695,556 + +0.4 695,563 + -0.5 695,563 + +0.5 695,564 - +1.1 695,573 + +0.8 695,573 + -0.1 695,574 - +0.6 695,574 - -0.8 695,575 + +1.4 695,586 + +0.0 695,586 + -1.4 695,587 - -0.5 695,622 - -0.9 695,643 + -0.4 695,644 - -1.3 695,644 - -0.1 695,670 - +0.3 695,670 - +0.0 695,670 - -0.1 695,677 - +0.1 695,677 - -0.4 695,677 - +0.8 695,745 + -1.4 695,746 - -0.8 696,469 - PfGW456L13_602 0.82 -0.4 696,469 - PfGW456L13_602 0.82 -1.3 696,513 + PfGW456L13_602 0.86 -0.6 696,513 + PfGW456L13_602 0.86 +0.3 696,513 + PfGW456L13_602 0.86 -0.5 696,514 - PfGW456L13_602 0.86 -0.4 696,514 - PfGW456L13_602 0.86 -0.4 696,830 + PfGW456L13_603 0.26 -0.3 696,830 + PfGW456L13_603 0.26 -0.7 696,830 + PfGW456L13_603 0.26 -0.7 696,830 + PfGW456L13_603 0.26 +0.1 696,831 - PfGW456L13_603 0.26 +0.9 696,831 - PfGW456L13_603 0.26 -0.5 696,831 - PfGW456L13_603 0.26 -0.1 696,964 - PfGW456L13_603 0.46 +0.7 697,060 + PfGW456L13_603 0.60 +0.2 697,060 + PfGW456L13_603 0.60 +0.5 697,061 - PfGW456L13_603 0.60 -0.3 697,061 - PfGW456L13_603 0.60 -0.1 697,061 - PfGW456L13_603 0.60 -0.0 697,061 - PfGW456L13_603 0.60 +1.0 697,138 + PfGW456L13_603 0.72 +0.3 697,138 + PfGW456L13_603 0.72 -0.2 697,138 + PfGW456L13_603 0.72 -0.4 697,138 + PfGW456L13_603 0.72 -0.0 697,138 + PfGW456L13_603 0.72 -0.4 697,139 - PfGW456L13_603 0.72 -0.1 697,139 - PfGW456L13_603 0.72 -0.9 697,139 - PfGW456L13_603 0.72 +1.3 697,139 - PfGW456L13_603 0.72 +0.4 697,151 + PfGW456L13_603 0.74 -0.5 697,152 - PfGW456L13_603 0.74 -1.8 697,266 + -1.0 697,267 - -0.7 697,278 + -0.7 697,279 - -0.1 697,325 + +1.0 697,325 + +0.0 697,325 + -0.5 697,325 + +1.1 697,326 - +0.7 697,326 - +0.8 697,326 - +0.1 697,382 - +0.1 697,382 - +0.4 697,382 - +0.0 697,382 - -1.8 697,382 - +0.3 697,382 - +0.6 697,382 - +0.5 697,382 - -0.0 697,399 - -0.8 697,542 + PfGW456L13_604 0.20 +0.8 697,542 + PfGW456L13_604 0.20 +0.1 697,542 + PfGW456L13_604 0.20 +0.3 697,543 - PfGW456L13_604 0.20 +0.4 697,543 - PfGW456L13_604 0.20 -0.4 697,543 - PfGW456L13_604 0.20 -1.4 697,546 + PfGW456L13_604 0.20 -1.3 697,546 + PfGW456L13_604 0.20 +0.2 697,547 - PfGW456L13_604 0.21 -1.5 697,553 + PfGW456L13_604 0.21 -0.1 697,553 + PfGW456L13_604 0.21 +0.0 697,553 + PfGW456L13_604 0.21 +0.2 697,553 + PfGW456L13_604 0.21 +0.2 697,553 + PfGW456L13_604 0.21 +0.1 697,553 + PfGW456L13_604 0.21 -0.1 697,553 + PfGW456L13_604 0.21 +0.2 697,554 - PfGW456L13_604 0.22 -0.1 697,554 - PfGW456L13_604 0.22 -0.5 697,554 - PfGW456L13_604 0.22 -2.6 697,554 - PfGW456L13_604 0.22 -0.9 697,554 - PfGW456L13_604 0.22 +0.5 697,619 + PfGW456L13_604 0.30 +0.1 697,620 - PfGW456L13_604 0.30 +0.9
Or see this region's nucleotide sequence