Experiment: Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_555 and PfGW456L13_556 are separated by 435 nucleotides PfGW456L13_556 and PfGW456L13_557 are separated by 11 nucleotides PfGW456L13_557 and PfGW456L13_558 overlap by 4 nucleotides
PfGW456L13_555 - Glycine cleavage system transcriptional activator, at 652,349 to 653,248
_555
PfGW456L13_556 - NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2), at 653,684 to 654,805
_556
PfGW456L13_557 - NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2), at 654,817 to 655,170
_557
PfGW456L13_558 - NAD(P) transhydrogenase subunit beta (EC 1.6.1.2), at 655,167 to 656,603
_558
Position (kb) 653
654
655 Strain fitness (log2 ratio) -2
-1
0
1
2 at 652.784 kb on + strand, within PfGW456L13_555 at 652.785 kb on - strand, within PfGW456L13_555 at 652.785 kb on - strand, within PfGW456L13_555 at 652.785 kb on - strand, within PfGW456L13_555 at 652.940 kb on + strand, within PfGW456L13_555 at 652.940 kb on + strand, within PfGW456L13_555 at 652.941 kb on - strand, within PfGW456L13_555 at 652.941 kb on - strand, within PfGW456L13_555 at 653.013 kb on + strand, within PfGW456L13_555 at 653.013 kb on + strand, within PfGW456L13_555 at 653.013 kb on + strand, within PfGW456L13_555 at 653.013 kb on + strand, within PfGW456L13_555 at 653.013 kb on + strand, within PfGW456L13_555 at 653.013 kb on + strand, within PfGW456L13_555 at 653.014 kb on - strand, within PfGW456L13_555 at 653.014 kb on - strand, within PfGW456L13_555 at 653.014 kb on - strand, within PfGW456L13_555 at 653.014 kb on - strand, within PfGW456L13_555 at 653.014 kb on - strand, within PfGW456L13_555 at 653.014 kb on - strand, within PfGW456L13_555 at 653.014 kb on - strand, within PfGW456L13_555 at 653.147 kb on + strand, within PfGW456L13_555 at 653.147 kb on + strand, within PfGW456L13_555 at 653.147 kb on + strand, within PfGW456L13_555 at 653.147 kb on + strand, within PfGW456L13_555 at 653.147 kb on + strand, within PfGW456L13_555 at 653.147 kb on + strand, within PfGW456L13_555 at 653.148 kb on - strand, within PfGW456L13_555 at 653.148 kb on - strand, within PfGW456L13_555 at 653.148 kb on - strand, within PfGW456L13_555 at 653.148 kb on - strand, within PfGW456L13_555 at 653.148 kb on - strand, within PfGW456L13_555 at 653.148 kb on - strand, within PfGW456L13_555 at 653.148 kb on - strand, within PfGW456L13_555 at 653.148 kb on - strand, within PfGW456L13_555 at 653.150 kb on + strand, within PfGW456L13_555 at 653.150 kb on + strand, within PfGW456L13_555 at 653.150 kb on + strand, within PfGW456L13_555 at 653.150 kb on + strand, within PfGW456L13_555 at 653.151 kb on - strand, within PfGW456L13_555 at 653.151 kb on - strand, within PfGW456L13_555 at 653.151 kb on - strand, within PfGW456L13_555 at 653.190 kb on + strand at 653.190 kb on + strand at 653.190 kb on + strand at 653.191 kb on - strand at 653.215 kb on - strand at 653.215 kb on - strand at 653.225 kb on + strand at 653.226 kb on - strand at 653.226 kb on - strand at 653.231 kb on + strand at 653.231 kb on + strand at 653.231 kb on + strand at 653.231 kb on + strand at 653.231 kb on + strand at 653.231 kb on + strand at 653.231 kb on + strand at 653.231 kb on + strand at 653.231 kb on + strand at 653.232 kb on - strand at 653.232 kb on - strand at 653.232 kb on - strand at 653.232 kb on - strand at 653.232 kb on - strand at 653.238 kb on + strand at 653.256 kb on - strand at 653.256 kb on - strand at 653.256 kb on - strand at 653.256 kb on - strand at 653.296 kb on + strand at 653.302 kb on + strand at 653.302 kb on + strand at 653.302 kb on + strand at 653.302 kb on + strand at 653.303 kb on - strand at 653.303 kb on - strand at 653.303 kb on - strand at 653.303 kb on - strand at 653.304 kb on + strand at 653.304 kb on + strand at 653.304 kb on + strand at 653.304 kb on + strand at 653.304 kb on + strand at 653.304 kb on + strand at 653.304 kb on + strand at 653.304 kb on + strand at 653.305 kb on - strand at 653.305 kb on - strand at 653.308 kb on + strand at 653.308 kb on + strand at 653.308 kb on + strand at 653.308 kb on + strand at 653.308 kb on + strand at 653.308 kb on + strand at 653.309 kb on - strand at 653.309 kb on - strand at 653.309 kb on - strand at 653.309 kb on - strand at 653.309 kb on - strand at 653.346 kb on - strand at 653.346 kb on - strand at 653.388 kb on + strand at 653.389 kb on - strand at 653.389 kb on - strand at 653.428 kb on + strand at 653.520 kb on + strand at 653.521 kb on - strand at 653.521 kb on - strand at 653.525 kb on - strand at 653.544 kb on + strand at 653.544 kb on + strand at 653.544 kb on + strand at 653.655 kb on - strand at 653.662 kb on - strand at 653.662 kb on - strand at 653.662 kb on - strand at 653.662 kb on - strand at 654.122 kb on + strand, within PfGW456L13_556 at 654.122 kb on + strand, within PfGW456L13_556 at 654.122 kb on + strand, within PfGW456L13_556 at 654.122 kb on + strand, within PfGW456L13_556 at 655.323 kb on + strand, within PfGW456L13_558 at 655.323 kb on + strand, within PfGW456L13_558 at 655.323 kb on + strand, within PfGW456L13_558 at 655.356 kb on - strand, within PfGW456L13_558 at 655.363 kb on - strand, within PfGW456L13_558
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.002 mg/ml remove 652,784 + PfGW456L13_555 0.48 +0.4 652,785 - PfGW456L13_555 0.48 +0.4 652,785 - PfGW456L13_555 0.48 +0.4 652,785 - PfGW456L13_555 0.48 +0.3 652,940 + PfGW456L13_555 0.66 -0.1 652,940 + PfGW456L13_555 0.66 +1.0 652,941 - PfGW456L13_555 0.66 -0.4 652,941 - PfGW456L13_555 0.66 -0.2 653,013 + PfGW456L13_555 0.74 +0.3 653,013 + PfGW456L13_555 0.74 -0.1 653,013 + PfGW456L13_555 0.74 +0.8 653,013 + PfGW456L13_555 0.74 -2.1 653,013 + PfGW456L13_555 0.74 -0.6 653,013 + PfGW456L13_555 0.74 -0.4 653,014 - PfGW456L13_555 0.74 +0.2 653,014 - PfGW456L13_555 0.74 -0.2 653,014 - PfGW456L13_555 0.74 -0.7 653,014 - PfGW456L13_555 0.74 -0.4 653,014 - PfGW456L13_555 0.74 +0.1 653,014 - PfGW456L13_555 0.74 -0.1 653,014 - PfGW456L13_555 0.74 -0.6 653,147 + PfGW456L13_555 0.89 -0.4 653,147 + PfGW456L13_555 0.89 -1.1 653,147 + PfGW456L13_555 0.89 +0.9 653,147 + PfGW456L13_555 0.89 -0.1 653,147 + PfGW456L13_555 0.89 +1.3 653,147 + PfGW456L13_555 0.89 -0.4 653,148 - PfGW456L13_555 0.89 +1.0 653,148 - PfGW456L13_555 0.89 -0.3 653,148 - PfGW456L13_555 0.89 +0.6 653,148 - PfGW456L13_555 0.89 -0.3 653,148 - PfGW456L13_555 0.89 -0.3 653,148 - PfGW456L13_555 0.89 -0.7 653,148 - PfGW456L13_555 0.89 +1.5 653,148 - PfGW456L13_555 0.89 +0.9 653,150 + PfGW456L13_555 0.89 +0.4 653,150 + PfGW456L13_555 0.89 +0.7 653,150 + PfGW456L13_555 0.89 -0.0 653,150 + PfGW456L13_555 0.89 +0.7 653,151 - PfGW456L13_555 0.89 +0.0 653,151 - PfGW456L13_555 0.89 -2.1 653,151 - PfGW456L13_555 0.89 +0.3 653,190 + -0.5 653,190 + +0.7 653,190 + -0.5 653,191 - +0.5 653,215 - +0.3 653,215 - +0.2 653,225 + +0.3 653,226 - -0.0 653,226 - +0.4 653,231 + -0.6 653,231 + +0.3 653,231 + +0.2 653,231 + +0.5 653,231 + -0.6 653,231 + +0.7 653,231 + -0.6 653,231 + +0.5 653,231 + -0.3 653,232 - +0.6 653,232 - -1.1 653,232 - +0.5 653,232 - +1.2 653,232 - -0.7 653,238 + -0.1 653,256 - +0.9 653,256 - -0.1 653,256 - +1.5 653,256 - -1.1 653,296 + -0.3 653,302 + -0.4 653,302 + +0.6 653,302 + +0.4 653,302 + -0.8 653,303 - +0.1 653,303 - +0.1 653,303 - +0.2 653,303 - +1.0 653,304 + +0.1 653,304 + -0.8 653,304 + -0.1 653,304 + -0.3 653,304 + +0.0 653,304 + +0.5 653,304 + +0.1 653,304 + -0.2 653,305 - -0.5 653,305 - +0.5 653,308 + +0.8 653,308 + -0.3 653,308 + +0.3 653,308 + +0.8 653,308 + -0.1 653,308 + -0.0 653,309 - -0.7 653,309 - +0.5 653,309 - -0.1 653,309 - -0.0 653,309 - -0.8 653,346 - +0.8 653,346 - +0.6 653,388 + -0.6 653,389 - +0.2 653,389 - +2.1 653,428 + -0.3 653,520 + -0.0 653,521 - +0.5 653,521 - -0.3 653,525 - +2.1 653,544 + -0.8 653,544 + +0.4 653,544 + -0.2 653,655 - +0.4 653,662 - +1.4 653,662 - +0.6 653,662 - +2.0 653,662 - -0.5 654,122 + PfGW456L13_556 0.39 -1.2 654,122 + PfGW456L13_556 0.39 +0.1 654,122 + PfGW456L13_556 0.39 -0.1 654,122 + PfGW456L13_556 0.39 -0.4 655,323 + PfGW456L13_558 0.11 +0.2 655,323 + PfGW456L13_558 0.11 +1.0 655,323 + PfGW456L13_558 0.11 +0.7 655,356 - PfGW456L13_558 0.13 -0.2 655,363 - PfGW456L13_558 0.14 -0.1
Or see this region's nucleotide sequence