Experiment: Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_5103 and PfGW456L13_5104 are separated by 102 nucleotides PfGW456L13_5104 and PfGW456L13_5105 are separated by 120 nucleotides PfGW456L13_5105 and PfGW456L13_5106 are separated by 0 nucleotides
PfGW456L13_5103 - Chaperone protein DnaK, at 5,694,760 to 5,696,676
_5103
PfGW456L13_5104 - Heat shock protein GrpE, at 5,696,779 to 5,697,345
_5104
PfGW456L13_5105 - hypothetical protein, at 5,697,466 to 5,697,585
_5105
PfGW456L13_5106 - DNA repair protein RecN, at 5,697,586 to 5,699,259
_5106
Position (kb) 5697
5698 Strain fitness (log2 ratio) -2
-1
0
1 at 5696.741 kb on - strand at 5696.756 kb on - strand at 5696.756 kb on - strand at 5696.756 kb on - strand at 5696.756 kb on - strand at 5696.756 kb on - strand at 5697.399 kb on - strand at 5697.399 kb on - strand at 5697.399 kb on - strand at 5697.399 kb on - strand at 5697.399 kb on - strand at 5697.399 kb on - strand at 5697.399 kb on - strand at 5697.399 kb on - strand at 5697.399 kb on - strand at 5697.399 kb on - strand at 5697.399 kb on - strand at 5697.399 kb on - strand at 5697.441 kb on - strand at 5697.441 kb on - strand at 5697.552 kb on - strand, within PfGW456L13_5105 at 5697.565 kb on + strand, within PfGW456L13_5105 at 5697.565 kb on + strand, within PfGW456L13_5105 at 5697.585 kb on + strand at 5697.585 kb on + strand at 5697.585 kb on + strand at 5697.585 kb on + strand at 5697.586 kb on - strand at 5697.586 kb on - strand at 5697.613 kb on + strand at 5697.613 kb on + strand at 5697.613 kb on + strand at 5697.613 kb on + strand at 5697.614 kb on - strand at 5697.614 kb on - strand at 5697.614 kb on - strand at 5697.902 kb on - strand, within PfGW456L13_5106 at 5698.031 kb on - strand, within PfGW456L13_5106 at 5698.159 kb on + strand, within PfGW456L13_5106 at 5698.160 kb on - strand, within PfGW456L13_5106 at 5698.160 kb on - strand, within PfGW456L13_5106 at 5698.310 kb on + strand, within PfGW456L13_5106 at 5698.310 kb on + strand, within PfGW456L13_5106 at 5698.310 kb on + strand, within PfGW456L13_5106 at 5698.311 kb on - strand, within PfGW456L13_5106 at 5698.311 kb on - strand, within PfGW456L13_5106 at 5698.311 kb on - strand, within PfGW456L13_5106 at 5698.483 kb on + strand, within PfGW456L13_5106 at 5698.483 kb on + strand, within PfGW456L13_5106 at 5698.483 kb on + strand, within PfGW456L13_5106 at 5698.483 kb on + strand, within PfGW456L13_5106 at 5698.483 kb on + strand, within PfGW456L13_5106 at 5698.484 kb on - strand, within PfGW456L13_5106 at 5698.484 kb on - strand, within PfGW456L13_5106 at 5698.484 kb on - strand, within PfGW456L13_5106 at 5698.510 kb on + strand, within PfGW456L13_5106 at 5698.510 kb on + strand, within PfGW456L13_5106 at 5698.511 kb on - strand, within PfGW456L13_5106
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.002 mg/ml remove 5,696,741 - +0.7 5,696,756 - -1.4 5,696,756 - -0.1 5,696,756 - -0.4 5,696,756 - +0.4 5,696,756 - -1.3 5,697,399 - +0.0 5,697,399 - -0.9 5,697,399 - -0.8 5,697,399 - -0.6 5,697,399 - -0.7 5,697,399 - -0.7 5,697,399 - -1.4 5,697,399 - +0.2 5,697,399 - +0.4 5,697,399 - -1.9 5,697,399 - -0.8 5,697,399 - -0.1 5,697,441 - +0.3 5,697,441 - -1.1 5,697,552 - PfGW456L13_5105 0.72 -0.8 5,697,565 + PfGW456L13_5105 0.82 -1.4 5,697,565 + PfGW456L13_5105 0.82 -0.6 5,697,585 + +0.2 5,697,585 + +0.3 5,697,585 + +1.0 5,697,585 + +0.1 5,697,586 - -0.2 5,697,586 - -0.8 5,697,613 + -0.9 5,697,613 + -0.1 5,697,613 + -0.9 5,697,613 + -0.1 5,697,614 - -0.6 5,697,614 - -1.6 5,697,614 - -0.1 5,697,902 - PfGW456L13_5106 0.19 -0.4 5,698,031 - PfGW456L13_5106 0.27 -0.5 5,698,159 + PfGW456L13_5106 0.34 -0.8 5,698,160 - PfGW456L13_5106 0.34 +0.8 5,698,160 - PfGW456L13_5106 0.34 +0.9 5,698,310 + PfGW456L13_5106 0.43 -1.3 5,698,310 + PfGW456L13_5106 0.43 +1.0 5,698,310 + PfGW456L13_5106 0.43 -0.1 5,698,311 - PfGW456L13_5106 0.43 +1.4 5,698,311 - PfGW456L13_5106 0.43 -0.1 5,698,311 - PfGW456L13_5106 0.43 -0.0 5,698,483 + PfGW456L13_5106 0.54 +0.4 5,698,483 + PfGW456L13_5106 0.54 -0.1 5,698,483 + PfGW456L13_5106 0.54 +0.5 5,698,483 + PfGW456L13_5106 0.54 -0.2 5,698,483 + PfGW456L13_5106 0.54 +0.5 5,698,484 - PfGW456L13_5106 0.54 -1.4 5,698,484 - PfGW456L13_5106 0.54 -0.2 5,698,484 - PfGW456L13_5106 0.54 -1.1 5,698,510 + PfGW456L13_5106 0.55 -0.3 5,698,510 + PfGW456L13_5106 0.55 -0.2 5,698,511 - PfGW456L13_5106 0.55 +0.0
Or see this region's nucleotide sequence