Experiment: Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_5047 and PfGW456L13_5048 are separated by 97 nucleotides PfGW456L13_5048 and PfGW456L13_5049 overlap by 8 nucleotides PfGW456L13_5049 and PfGW456L13_5050 are separated by 372 nucleotides
PfGW456L13_5047 - ABC transporter, ATP-binding protein, at 5,625,082 to 5,626,809
_5047
PfGW456L13_5048 - Dna binding response regulator PrrA (RegA), at 5,626,907 to 5,627,467
_5048
PfGW456L13_5049 - Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-), at 5,627,460 to 5,628,722
_5049
PfGW456L13_5050 - probable periplasmic protein NMA1059, at 5,629,095 to 5,629,811
_5050
Position (kb) 5627
5628
5629 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5626.508 kb on + strand, within PfGW456L13_5047 at 5626.508 kb on + strand, within PfGW456L13_5047 at 5626.509 kb on - strand, within PfGW456L13_5047 at 5626.518 kb on - strand, within PfGW456L13_5047 at 5626.560 kb on - strand, within PfGW456L13_5047 at 5626.560 kb on - strand, within PfGW456L13_5047 at 5626.560 kb on - strand, within PfGW456L13_5047 at 5626.610 kb on + strand, within PfGW456L13_5047 at 5626.611 kb on - strand, within PfGW456L13_5047 at 5626.622 kb on + strand, within PfGW456L13_5047 at 5626.622 kb on + strand, within PfGW456L13_5047 at 5626.622 kb on + strand, within PfGW456L13_5047 at 5626.623 kb on - strand, within PfGW456L13_5047 at 5626.623 kb on - strand, within PfGW456L13_5047 at 5626.651 kb on + strand at 5626.724 kb on + strand at 5626.725 kb on - strand at 5626.823 kb on + strand at 5626.852 kb on + strand at 5626.852 kb on + strand at 5626.852 kb on + strand at 5626.852 kb on + strand at 5626.852 kb on + strand at 5626.852 kb on + strand at 5626.853 kb on - strand at 5626.853 kb on - strand at 5626.853 kb on - strand at 5626.853 kb on - strand at 5626.853 kb on - strand at 5626.853 kb on - strand at 5626.853 kb on - strand at 5626.881 kb on - strand at 5626.881 kb on - strand at 5627.139 kb on + strand, within PfGW456L13_5048 at 5627.140 kb on - strand, within PfGW456L13_5048 at 5627.140 kb on - strand, within PfGW456L13_5048 at 5627.140 kb on - strand, within PfGW456L13_5048 at 5627.140 kb on - strand, within PfGW456L13_5048 at 5627.140 kb on - strand, within PfGW456L13_5048 at 5627.292 kb on + strand, within PfGW456L13_5048 at 5627.533 kb on + strand at 5627.533 kb on + strand at 5627.534 kb on - strand at 5627.534 kb on - strand at 5627.534 kb on - strand at 5627.534 kb on - strand at 5627.534 kb on - strand at 5627.534 kb on - strand at 5627.534 kb on - strand at 5627.616 kb on - strand, within PfGW456L13_5049 at 5627.837 kb on - strand, within PfGW456L13_5049 at 5627.837 kb on - strand, within PfGW456L13_5049 at 5627.837 kb on - strand, within PfGW456L13_5049 at 5627.943 kb on + strand, within PfGW456L13_5049 at 5627.966 kb on + strand, within PfGW456L13_5049 at 5627.967 kb on - strand, within PfGW456L13_5049 at 5628.049 kb on - strand, within PfGW456L13_5049 at 5628.253 kb on + strand, within PfGW456L13_5049 at 5628.253 kb on + strand, within PfGW456L13_5049 at 5628.299 kb on - strand, within PfGW456L13_5049 at 5628.322 kb on + strand, within PfGW456L13_5049 at 5628.322 kb on + strand, within PfGW456L13_5049 at 5628.322 kb on + strand, within PfGW456L13_5049 at 5628.322 kb on + strand, within PfGW456L13_5049 at 5628.322 kb on + strand, within PfGW456L13_5049 at 5628.322 kb on + strand, within PfGW456L13_5049 at 5628.323 kb on - strand, within PfGW456L13_5049 at 5628.323 kb on - strand, within PfGW456L13_5049 at 5628.323 kb on - strand, within PfGW456L13_5049 at 5628.323 kb on - strand, within PfGW456L13_5049 at 5628.323 kb on - strand, within PfGW456L13_5049 at 5628.323 kb on - strand, within PfGW456L13_5049 at 5628.323 kb on - strand, within PfGW456L13_5049 at 5628.323 kb on - strand, within PfGW456L13_5049 at 5628.336 kb on + strand, within PfGW456L13_5049 at 5628.336 kb on + strand, within PfGW456L13_5049 at 5628.337 kb on - strand, within PfGW456L13_5049 at 5628.358 kb on + strand, within PfGW456L13_5049 at 5628.403 kb on + strand, within PfGW456L13_5049 at 5628.403 kb on + strand, within PfGW456L13_5049 at 5628.403 kb on + strand, within PfGW456L13_5049 at 5628.404 kb on - strand, within PfGW456L13_5049 at 5628.404 kb on - strand, within PfGW456L13_5049 at 5628.404 kb on - strand, within PfGW456L13_5049 at 5628.404 kb on - strand, within PfGW456L13_5049 at 5628.404 kb on - strand, within PfGW456L13_5049 at 5628.404 kb on - strand, within PfGW456L13_5049 at 5628.406 kb on + strand, within PfGW456L13_5049 at 5628.406 kb on + strand, within PfGW456L13_5049 at 5628.406 kb on + strand, within PfGW456L13_5049 at 5628.406 kb on + strand, within PfGW456L13_5049 at 5628.406 kb on + strand, within PfGW456L13_5049 at 5628.407 kb on - strand, within PfGW456L13_5049 at 5628.442 kb on + strand, within PfGW456L13_5049 at 5628.518 kb on + strand, within PfGW456L13_5049 at 5628.518 kb on + strand, within PfGW456L13_5049 at 5628.518 kb on + strand, within PfGW456L13_5049 at 5628.519 kb on - strand, within PfGW456L13_5049 at 5628.519 kb on - strand, within PfGW456L13_5049 at 5628.762 kb on + strand at 5628.762 kb on + strand at 5628.762 kb on + strand at 5628.762 kb on + strand at 5628.762 kb on + strand at 5628.762 kb on + strand at 5628.762 kb on + strand at 5628.762 kb on + strand at 5628.763 kb on - strand at 5628.763 kb on - strand at 5628.763 kb on - strand at 5628.763 kb on - strand at 5628.763 kb on - strand at 5628.763 kb on - strand at 5628.763 kb on - strand at 5628.764 kb on + strand at 5628.815 kb on + strand at 5628.816 kb on - strand at 5628.821 kb on + strand at 5628.821 kb on + strand at 5628.822 kb on - strand at 5628.890 kb on - strand at 5628.890 kb on - strand at 5628.904 kb on + strand at 5628.904 kb on + strand at 5628.905 kb on - strand at 5628.914 kb on + strand at 5628.997 kb on + strand at 5628.998 kb on - strand at 5629.007 kb on - strand at 5629.007 kb on - strand at 5629.007 kb on - strand at 5629.007 kb on - strand at 5629.007 kb on - strand at 5629.007 kb on - strand at 5629.026 kb on + strand at 5629.033 kb on + strand at 5629.034 kb on - strand at 5629.034 kb on - strand at 5629.185 kb on + strand, within PfGW456L13_5050 at 5629.185 kb on + strand, within PfGW456L13_5050 at 5629.185 kb on + strand, within PfGW456L13_5050 at 5629.185 kb on + strand, within PfGW456L13_5050 at 5629.186 kb on - strand, within PfGW456L13_5050 at 5629.186 kb on - strand, within PfGW456L13_5050 at 5629.186 kb on - strand, within PfGW456L13_5050 at 5629.254 kb on + strand, within PfGW456L13_5050 at 5629.254 kb on + strand, within PfGW456L13_5050 at 5629.255 kb on - strand, within PfGW456L13_5050 at 5629.389 kb on + strand, within PfGW456L13_5050 at 5629.389 kb on + strand, within PfGW456L13_5050 at 5629.389 kb on + strand, within PfGW456L13_5050 at 5629.389 kb on + strand, within PfGW456L13_5050 at 5629.389 kb on + strand, within PfGW456L13_5050 at 5629.389 kb on + strand, within PfGW456L13_5050 at 5629.389 kb on + strand, within PfGW456L13_5050 at 5629.390 kb on - strand, within PfGW456L13_5050 at 5629.390 kb on - strand, within PfGW456L13_5050 at 5629.390 kb on - strand, within PfGW456L13_5050 at 5629.390 kb on - strand, within PfGW456L13_5050 at 5629.565 kb on - strand, within PfGW456L13_5050 at 5629.636 kb on - strand, within PfGW456L13_5050 at 5629.636 kb on - strand, within PfGW456L13_5050 at 5629.683 kb on + strand, within PfGW456L13_5050 at 5629.683 kb on + strand, within PfGW456L13_5050 at 5629.683 kb on + strand, within PfGW456L13_5050 at 5629.683 kb on + strand, within PfGW456L13_5050 at 5629.683 kb on + strand, within PfGW456L13_5050 at 5629.683 kb on + strand, within PfGW456L13_5050 at 5629.683 kb on + strand, within PfGW456L13_5050 at 5629.683 kb on + strand, within PfGW456L13_5050 at 5629.683 kb on + strand, within PfGW456L13_5050 at 5629.683 kb on + strand, within PfGW456L13_5050 at 5629.683 kb on + strand, within PfGW456L13_5050 at 5629.683 kb on + strand, within PfGW456L13_5050 at 5629.683 kb on + strand, within PfGW456L13_5050 at 5629.683 kb on + strand, within PfGW456L13_5050 at 5629.683 kb on + strand, within PfGW456L13_5050 at 5629.683 kb on + strand, within PfGW456L13_5050 at 5629.683 kb on + strand, within PfGW456L13_5050 at 5629.683 kb on + strand, within PfGW456L13_5050 at 5629.683 kb on + strand, within PfGW456L13_5050 at 5629.683 kb on + strand, within PfGW456L13_5050 at 5629.683 kb on + strand, within PfGW456L13_5050 at 5629.683 kb on + strand, within PfGW456L13_5050 at 5629.684 kb on - strand, within PfGW456L13_5050 at 5629.684 kb on - strand, within PfGW456L13_5050 at 5629.684 kb on - strand, within PfGW456L13_5050 at 5629.684 kb on - strand, within PfGW456L13_5050 at 5629.684 kb on - strand, within PfGW456L13_5050 at 5629.684 kb on - strand, within PfGW456L13_5050 at 5629.684 kb on - strand, within PfGW456L13_5050 at 5629.684 kb on - strand, within PfGW456L13_5050 at 5629.684 kb on - strand, within PfGW456L13_5050 at 5629.684 kb on - strand, within PfGW456L13_5050 at 5629.684 kb on - strand, within PfGW456L13_5050 at 5629.684 kb on - strand, within PfGW456L13_5050 at 5629.684 kb on - strand, within PfGW456L13_5050 at 5629.684 kb on - strand, within PfGW456L13_5050 at 5629.684 kb on - strand, within PfGW456L13_5050 at 5629.684 kb on - strand at 5629.684 kb on - strand, within PfGW456L13_5050 at 5629.684 kb on - strand, within PfGW456L13_5050 at 5629.684 kb on - strand, within PfGW456L13_5050 at 5629.684 kb on - strand, within PfGW456L13_5050 at 5629.684 kb on - strand, within PfGW456L13_5050
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.002 mg/ml remove 5,626,508 + PfGW456L13_5047 0.83 -1.5 5,626,508 + PfGW456L13_5047 0.83 +0.9 5,626,509 - PfGW456L13_5047 0.83 +0.8 5,626,518 - PfGW456L13_5047 0.83 +0.5 5,626,560 - PfGW456L13_5047 0.86 -0.3 5,626,560 - PfGW456L13_5047 0.86 +1.5 5,626,560 - PfGW456L13_5047 0.86 +0.9 5,626,610 + PfGW456L13_5047 0.88 -1.3 5,626,611 - PfGW456L13_5047 0.88 -0.1 5,626,622 + PfGW456L13_5047 0.89 -0.0 5,626,622 + PfGW456L13_5047 0.89 -0.8 5,626,622 + PfGW456L13_5047 0.89 +0.8 5,626,623 - PfGW456L13_5047 0.89 -0.2 5,626,623 - PfGW456L13_5047 0.89 +0.5 5,626,651 + +0.4 5,626,724 + +1.9 5,626,725 - +1.7 5,626,823 + +0.3 5,626,852 + +0.6 5,626,852 + +0.1 5,626,852 + -0.2 5,626,852 + -0.4 5,626,852 + -1.3 5,626,852 + +0.0 5,626,853 - +0.6 5,626,853 - +0.3 5,626,853 - -0.2 5,626,853 - -0.0 5,626,853 - -0.2 5,626,853 - -0.8 5,626,853 - +0.6 5,626,881 - -0.3 5,626,881 - +0.1 5,627,139 + PfGW456L13_5048 0.41 -1.3 5,627,140 - PfGW456L13_5048 0.42 -2.5 5,627,140 - PfGW456L13_5048 0.42 -0.4 5,627,140 - PfGW456L13_5048 0.42 -0.9 5,627,140 - PfGW456L13_5048 0.42 +0.1 5,627,140 - PfGW456L13_5048 0.42 -1.3 5,627,292 + PfGW456L13_5048 0.69 -1.5 5,627,533 + -1.9 5,627,533 + -0.9 5,627,534 - +0.4 5,627,534 - -0.9 5,627,534 - -0.3 5,627,534 - -1.1 5,627,534 - -0.6 5,627,534 - +0.1 5,627,534 - -0.3 5,627,616 - PfGW456L13_5049 0.12 -0.3 5,627,837 - PfGW456L13_5049 0.30 -1.9 5,627,837 - PfGW456L13_5049 0.30 +0.0 5,627,837 - PfGW456L13_5049 0.30 -1.3 5,627,943 + PfGW456L13_5049 0.38 -0.7 5,627,966 + PfGW456L13_5049 0.40 -2.3 5,627,967 - PfGW456L13_5049 0.40 -0.7 5,628,049 - PfGW456L13_5049 0.47 -0.3 5,628,253 + PfGW456L13_5049 0.63 -0.2 5,628,253 + PfGW456L13_5049 0.63 -2.3 5,628,299 - PfGW456L13_5049 0.66 +0.2 5,628,322 + PfGW456L13_5049 0.68 -0.1 5,628,322 + PfGW456L13_5049 0.68 -1.1 5,628,322 + PfGW456L13_5049 0.68 -0.3 5,628,322 + PfGW456L13_5049 0.68 -1.7 5,628,322 + PfGW456L13_5049 0.68 -1.0 5,628,322 + PfGW456L13_5049 0.68 -3.3 5,628,323 - PfGW456L13_5049 0.68 +0.2 5,628,323 - PfGW456L13_5049 0.68 -1.1 5,628,323 - PfGW456L13_5049 0.68 -0.9 5,628,323 - PfGW456L13_5049 0.68 -0.2 5,628,323 - PfGW456L13_5049 0.68 +0.2 5,628,323 - PfGW456L13_5049 0.68 -0.0 5,628,323 - PfGW456L13_5049 0.68 +0.4 5,628,323 - PfGW456L13_5049 0.68 -0.4 5,628,336 + PfGW456L13_5049 0.69 +0.3 5,628,336 + PfGW456L13_5049 0.69 -1.2 5,628,337 - PfGW456L13_5049 0.69 -1.2 5,628,358 + PfGW456L13_5049 0.71 -1.3 5,628,403 + PfGW456L13_5049 0.75 -0.6 5,628,403 + PfGW456L13_5049 0.75 -3.6 5,628,403 + PfGW456L13_5049 0.75 -0.1 5,628,404 - PfGW456L13_5049 0.75 -0.2 5,628,404 - PfGW456L13_5049 0.75 -1.1 5,628,404 - PfGW456L13_5049 0.75 -0.1 5,628,404 - PfGW456L13_5049 0.75 +0.3 5,628,404 - PfGW456L13_5049 0.75 -1.9 5,628,404 - PfGW456L13_5049 0.75 +0.3 5,628,406 + PfGW456L13_5049 0.75 -0.8 5,628,406 + PfGW456L13_5049 0.75 -1.9 5,628,406 + PfGW456L13_5049 0.75 -3.4 5,628,406 + PfGW456L13_5049 0.75 -1.4 5,628,406 + PfGW456L13_5049 0.75 -2.4 5,628,407 - PfGW456L13_5049 0.75 -0.3 5,628,442 + PfGW456L13_5049 0.78 -0.2 5,628,518 + PfGW456L13_5049 0.84 -0.5 5,628,518 + PfGW456L13_5049 0.84 -0.2 5,628,518 + PfGW456L13_5049 0.84 -2.1 5,628,519 - PfGW456L13_5049 0.84 -0.5 5,628,519 - PfGW456L13_5049 0.84 +0.6 5,628,762 + -0.5 5,628,762 + +0.2 5,628,762 + -0.3 5,628,762 + +0.1 5,628,762 + +0.8 5,628,762 + -0.7 5,628,762 + +1.6 5,628,762 + +0.8 5,628,763 - -1.5 5,628,763 - -0.4 5,628,763 - +0.8 5,628,763 - -0.5 5,628,763 - +0.7 5,628,763 - -1.6 5,628,763 - -0.4 5,628,764 + +0.5 5,628,815 + -0.9 5,628,816 - -0.1 5,628,821 + -0.4 5,628,821 + -0.7 5,628,822 - +0.9 5,628,890 - +1.4 5,628,890 - +0.6 5,628,904 + -0.0 5,628,904 + -1.9 5,628,905 - +0.0 5,628,914 + +0.3 5,628,997 + +0.2 5,628,998 - +0.3 5,629,007 - -1.0 5,629,007 - +0.4 5,629,007 - -0.2 5,629,007 - +0.2 5,629,007 - -0.3 5,629,007 - -0.6 5,629,026 + +0.4 5,629,033 + -0.3 5,629,034 - -1.2 5,629,034 - -0.9 5,629,185 + PfGW456L13_5050 0.13 +0.2 5,629,185 + PfGW456L13_5050 0.13 -0.0 5,629,185 + PfGW456L13_5050 0.13 -0.0 5,629,185 + PfGW456L13_5050 0.13 -1.7 5,629,186 - PfGW456L13_5050 0.13 -0.0 5,629,186 - PfGW456L13_5050 0.13 -0.6 5,629,186 - PfGW456L13_5050 0.13 +0.7 5,629,254 + PfGW456L13_5050 0.22 +0.6 5,629,254 + PfGW456L13_5050 0.22 -1.5 5,629,255 - PfGW456L13_5050 0.22 +0.2 5,629,389 + PfGW456L13_5050 0.41 +0.3 5,629,389 + PfGW456L13_5050 0.41 +0.8 5,629,389 + PfGW456L13_5050 0.41 -0.1 5,629,389 + PfGW456L13_5050 0.41 +0.3 5,629,389 + PfGW456L13_5050 0.41 +0.6 5,629,389 + PfGW456L13_5050 0.41 -0.7 5,629,389 + PfGW456L13_5050 0.41 +1.3 5,629,390 - PfGW456L13_5050 0.41 -0.1 5,629,390 - PfGW456L13_5050 0.41 +0.1 5,629,390 - PfGW456L13_5050 0.41 +0.3 5,629,390 - PfGW456L13_5050 0.41 +0.2 5,629,565 - PfGW456L13_5050 0.66 -0.6 5,629,636 - PfGW456L13_5050 0.75 -0.6 5,629,636 - PfGW456L13_5050 0.75 +1.0 5,629,683 + PfGW456L13_5050 0.82 -0.4 5,629,683 + PfGW456L13_5050 0.82 +1.5 5,629,683 + PfGW456L13_5050 0.82 +0.3 5,629,683 + PfGW456L13_5050 0.82 +0.1 5,629,683 + PfGW456L13_5050 0.82 -0.7 5,629,683 + PfGW456L13_5050 0.82 -0.1 5,629,683 + PfGW456L13_5050 0.82 +0.5 5,629,683 + PfGW456L13_5050 0.82 +0.2 5,629,683 + PfGW456L13_5050 0.82 -0.7 5,629,683 + PfGW456L13_5050 0.82 +0.5 5,629,683 + PfGW456L13_5050 0.82 -0.2 5,629,683 + PfGW456L13_5050 0.82 -0.6 5,629,683 + PfGW456L13_5050 0.82 -0.5 5,629,683 + PfGW456L13_5050 0.82 +0.4 5,629,683 + PfGW456L13_5050 0.82 -0.4 5,629,683 + PfGW456L13_5050 0.82 +0.4 5,629,683 + PfGW456L13_5050 0.82 -0.2 5,629,683 + PfGW456L13_5050 0.82 -0.4 5,629,683 + PfGW456L13_5050 0.82 +0.3 5,629,683 + PfGW456L13_5050 0.82 -0.4 5,629,683 + PfGW456L13_5050 0.82 -0.8 5,629,683 + PfGW456L13_5050 0.82 +0.9 5,629,684 - PfGW456L13_5050 0.82 -0.2 5,629,684 - PfGW456L13_5050 0.82 +0.6 5,629,684 - PfGW456L13_5050 0.82 -0.6 5,629,684 - PfGW456L13_5050 0.82 -1.5 5,629,684 - PfGW456L13_5050 0.82 -0.5 5,629,684 - PfGW456L13_5050 0.82 +1.2 5,629,684 - PfGW456L13_5050 0.82 -0.1 5,629,684 - PfGW456L13_5050 0.82 +0.2 5,629,684 - PfGW456L13_5050 0.82 +1.0 5,629,684 - PfGW456L13_5050 0.82 -0.2 5,629,684 - PfGW456L13_5050 0.82 +0.6 5,629,684 - PfGW456L13_5050 0.82 +0.7 5,629,684 - PfGW456L13_5050 0.82 +0.3 5,629,684 - PfGW456L13_5050 0.82 +0.8 5,629,684 - PfGW456L13_5050 0.82 +1.3 5,629,684 - +1.6 5,629,684 - PfGW456L13_5050 0.82 +0.5 5,629,684 - PfGW456L13_5050 0.82 -0.2 5,629,684 - PfGW456L13_5050 0.82 +0.7 5,629,684 - PfGW456L13_5050 0.82 -0.1 5,629,684 - PfGW456L13_5050 0.82 -0.5
Or see this region's nucleotide sequence