Experiment: Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4827 and PfGW456L13_4828 are separated by 121 nucleotides PfGW456L13_4828 and PfGW456L13_4829 are separated by 296 nucleotides PfGW456L13_4829 and PfGW456L13_4830 are separated by 39 nucleotides
PfGW456L13_4827 - MutT/nudix family protein, at 5,390,052 to 5,390,603
_4827
PfGW456L13_4828 - Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1), at 5,390,725 to 5,391,228
_4828
PfGW456L13_4829 - Predicted transcriptional regulator of N-Acetylglucosamine utilization, GntR family, at 5,391,525 to 5,392,256
_4829
PfGW456L13_4830 - N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) , at 5,392,296 to 5,393,402
_4830
Position (kb)
5391
5392
5393 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5390.551 kb on - strand at 5390.597 kb on + strand at 5390.684 kb on + strand at 5390.684 kb on + strand at 5390.684 kb on + strand at 5390.684 kb on + strand at 5390.684 kb on + strand at 5390.685 kb on - strand at 5390.686 kb on + strand at 5390.686 kb on + strand at 5390.686 kb on + strand at 5390.686 kb on + strand at 5390.686 kb on + strand at 5390.686 kb on + strand at 5390.686 kb on + strand at 5390.686 kb on + strand at 5390.686 kb on + strand at 5390.687 kb on - strand at 5390.687 kb on - strand at 5390.687 kb on - strand at 5390.687 kb on - strand at 5390.687 kb on - strand at 5390.687 kb on - strand at 5390.687 kb on - strand at 5390.687 kb on - strand at 5390.687 kb on - strand at 5390.687 kb on - strand at 5390.687 kb on - strand at 5390.690 kb on + strand at 5390.690 kb on + strand at 5390.690 kb on + strand at 5390.690 kb on + strand at 5390.690 kb on + strand at 5390.690 kb on + strand at 5390.690 kb on + strand at 5390.690 kb on + strand at 5390.690 kb on + strand at 5390.690 kb on + strand at 5390.690 kb on + strand at 5390.690 kb on + strand at 5390.690 kb on + strand at 5390.690 kb on + strand at 5390.690 kb on + strand at 5390.690 kb on + strand at 5390.690 kb on + strand at 5390.690 kb on + strand at 5390.690 kb on + strand at 5390.690 kb on + strand at 5390.690 kb on + strand at 5390.690 kb on + strand at 5390.690 kb on + strand at 5390.690 kb on + strand at 5390.690 kb on + strand at 5390.690 kb on + strand at 5390.691 kb on - strand at 5390.691 kb on - strand at 5390.691 kb on - strand at 5390.691 kb on - strand at 5390.691 kb on - strand at 5390.691 kb on - strand at 5390.691 kb on - strand at 5390.691 kb on - strand at 5390.691 kb on - strand at 5390.691 kb on - strand at 5390.691 kb on - strand at 5390.691 kb on - strand at 5390.691 kb on - strand at 5390.691 kb on - strand at 5390.691 kb on - strand at 5390.691 kb on - strand at 5390.691 kb on - strand at 5390.691 kb on - strand at 5390.694 kb on + strand at 5390.695 kb on - strand at 5390.695 kb on - strand at 5390.956 kb on + strand, within PfGW456L13_4828 at 5390.956 kb on + strand, within PfGW456L13_4828 at 5390.956 kb on + strand, within PfGW456L13_4828 at 5390.956 kb on + strand, within PfGW456L13_4828 at 5390.957 kb on - strand, within PfGW456L13_4828 at 5390.957 kb on - strand, within PfGW456L13_4828 at 5390.957 kb on - strand, within PfGW456L13_4828 at 5391.013 kb on + strand, within PfGW456L13_4828 at 5391.304 kb on - strand at 5391.304 kb on - strand at 5391.319 kb on - strand at 5391.349 kb on + strand at 5391.350 kb on - strand at 5391.369 kb on - strand at 5391.404 kb on + strand at 5391.404 kb on + strand at 5391.404 kb on + strand at 5391.405 kb on - strand at 5391.415 kb on + strand at 5391.415 kb on + strand at 5391.416 kb on - strand at 5391.416 kb on - strand at 5391.416 kb on - strand at 5391.416 kb on - strand at 5391.416 kb on - strand at 5391.479 kb on - strand at 5391.491 kb on + strand at 5391.500 kb on + strand at 5391.518 kb on + strand at 5391.519 kb on - strand at 5391.519 kb on - strand at 5391.519 kb on - strand at 5391.519 kb on - strand at 5391.519 kb on - strand at 5391.519 kb on - strand at 5391.522 kb on + strand at 5391.522 kb on + strand at 5391.522 kb on + strand at 5391.522 kb on + strand at 5391.576 kb on + strand at 5391.576 kb on + strand at 5391.576 kb on + strand at 5392.039 kb on - strand, within PfGW456L13_4829 at 5392.039 kb on - strand, within PfGW456L13_4829 at 5392.209 kb on + strand at 5392.209 kb on + strand at 5392.209 kb on + strand at 5392.209 kb on + strand at 5392.209 kb on + strand at 5392.210 kb on - strand at 5392.210 kb on - strand at 5392.210 kb on - strand at 5392.210 kb on - strand at 5392.210 kb on - strand at 5392.210 kb on - strand at 5392.210 kb on - strand at 5392.210 kb on - strand at 5392.210 kb on - strand at 5392.225 kb on - strand at 5392.225 kb on - strand at 5392.227 kb on + strand at 5392.227 kb on + strand at 5392.227 kb on + strand at 5392.227 kb on + strand at 5392.228 kb on - strand at 5392.310 kb on + strand at 5392.311 kb on - strand at 5392.416 kb on + strand, within PfGW456L13_4830 at 5392.417 kb on - strand, within PfGW456L13_4830 at 5392.529 kb on + strand, within PfGW456L13_4830 at 5392.529 kb on + strand, within PfGW456L13_4830 at 5392.529 kb on + strand, within PfGW456L13_4830 at 5392.529 kb on + strand, within PfGW456L13_4830 at 5392.529 kb on + strand, within PfGW456L13_4830 at 5392.529 kb on + strand, within PfGW456L13_4830 at 5392.530 kb on - strand, within PfGW456L13_4830 at 5392.530 kb on - strand, within PfGW456L13_4830 at 5392.573 kb on + strand, within PfGW456L13_4830 at 5392.574 kb on - strand, within PfGW456L13_4830 at 5392.645 kb on + strand, within PfGW456L13_4830 at 5392.646 kb on - strand, within PfGW456L13_4830 at 5392.646 kb on - strand, within PfGW456L13_4830 at 5392.662 kb on + strand, within PfGW456L13_4830 at 5392.662 kb on + strand, within PfGW456L13_4830 at 5392.662 kb on + strand, within PfGW456L13_4830 at 5392.663 kb on - strand, within PfGW456L13_4830 at 5392.734 kb on + strand, within PfGW456L13_4830 at 5392.735 kb on - strand, within PfGW456L13_4830 at 5392.735 kb on - strand, within PfGW456L13_4830 at 5392.735 kb on - strand, within PfGW456L13_4830 at 5392.794 kb on - strand, within PfGW456L13_4830 at 5392.857 kb on + strand, within PfGW456L13_4830 at 5392.857 kb on + strand, within PfGW456L13_4830 at 5392.857 kb on + strand, within PfGW456L13_4830 at 5392.857 kb on + strand, within PfGW456L13_4830 at 5392.858 kb on - strand, within PfGW456L13_4830 at 5392.858 kb on - strand, within PfGW456L13_4830 at 5392.858 kb on - strand, within PfGW456L13_4830 at 5392.858 kb on - strand, within PfGW456L13_4830 at 5392.858 kb on - strand, within PfGW456L13_4830 at 5392.858 kb on - strand, within PfGW456L13_4830 at 5392.911 kb on + strand, within PfGW456L13_4830 at 5392.911 kb on + strand, within PfGW456L13_4830 at 5392.911 kb on + strand, within PfGW456L13_4830 at 5392.911 kb on + strand, within PfGW456L13_4830 at 5392.911 kb on + strand, within PfGW456L13_4830 at 5392.911 kb on + strand, within PfGW456L13_4830 at 5392.911 kb on + strand, within PfGW456L13_4830 at 5392.912 kb on - strand, within PfGW456L13_4830 at 5392.912 kb on - strand, within PfGW456L13_4830 at 5392.912 kb on - strand, within PfGW456L13_4830 at 5392.912 kb on - strand, within PfGW456L13_4830 at 5392.980 kb on + strand, within PfGW456L13_4830 at 5392.981 kb on - strand, within PfGW456L13_4830 at 5392.981 kb on - strand, within PfGW456L13_4830 at 5392.981 kb on - strand, within PfGW456L13_4830 at 5393.058 kb on + strand, within PfGW456L13_4830 at 5393.058 kb on + strand, within PfGW456L13_4830 at 5393.058 kb on + strand, within PfGW456L13_4830 at 5393.107 kb on - strand, within PfGW456L13_4830
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.002 mg/ml remove 5,390,551 - +0.8 5,390,597 + +0.6 5,390,684 + -0.0 5,390,684 + +0.2 5,390,684 + -1.2 5,390,684 + +0.2 5,390,684 + +0.3 5,390,685 - -0.2 5,390,686 + -0.1 5,390,686 + +0.5 5,390,686 + -1.9 5,390,686 + -0.1 5,390,686 + -1.0 5,390,686 + -1.4 5,390,686 + +0.2 5,390,686 + -0.6 5,390,686 + +0.1 5,390,687 - -0.0 5,390,687 - -0.0 5,390,687 - +0.6 5,390,687 - +2.3 5,390,687 - -0.6 5,390,687 - -0.0 5,390,687 - +0.2 5,390,687 - -0.2 5,390,687 - -0.4 5,390,687 - -0.5 5,390,687 - +0.7 5,390,690 + +0.2 5,390,690 + +0.4 5,390,690 + -0.8 5,390,690 + +0.6 5,390,690 + +0.5 5,390,690 + +0.1 5,390,690 + -0.0 5,390,690 + -0.3 5,390,690 + -0.0 5,390,690 + +0.3 5,390,690 + +0.6 5,390,690 + +0.0 5,390,690 + -0.5 5,390,690 + -0.6 5,390,690 + +0.0 5,390,690 + -0.8 5,390,690 + +0.0 5,390,690 + +0.3 5,390,690 + +0.6 5,390,690 + -0.8 5,390,690 + -0.6 5,390,690 + -0.6 5,390,690 + -0.7 5,390,690 + +1.0 5,390,690 + -0.6 5,390,690 + +0.3 5,390,691 - +0.3 5,390,691 - -0.8 5,390,691 - +0.8 5,390,691 - -0.9 5,390,691 - -0.2 5,390,691 - -1.0 5,390,691 - +0.8 5,390,691 - -0.2 5,390,691 - +0.0 5,390,691 - -1.2 5,390,691 - -0.9 5,390,691 - +0.1 5,390,691 - -0.1 5,390,691 - -0.4 5,390,691 - -0.7 5,390,691 - +0.1 5,390,691 - +0.0 5,390,691 - +1.2 5,390,694 + +0.6 5,390,695 - +0.4 5,390,695 - +0.7 5,390,956 + PfGW456L13_4828 0.46 -0.0 5,390,956 + PfGW456L13_4828 0.46 -1.3 5,390,956 + PfGW456L13_4828 0.46 +0.3 5,390,956 + PfGW456L13_4828 0.46 +0.6 5,390,957 - PfGW456L13_4828 0.46 -0.4 5,390,957 - PfGW456L13_4828 0.46 -0.9 5,390,957 - PfGW456L13_4828 0.46 +0.4 5,391,013 + PfGW456L13_4828 0.57 +0.5 5,391,304 - -0.3 5,391,304 - +0.1 5,391,319 - -0.5 5,391,349 + +0.0 5,391,350 - +1.0 5,391,369 - -1.0 5,391,404 + +0.3 5,391,404 + -0.3 5,391,404 + +0.4 5,391,405 - -0.1 5,391,415 + -0.4 5,391,415 + +0.4 5,391,416 - -0.6 5,391,416 - +0.2 5,391,416 - -0.3 5,391,416 - +0.8 5,391,416 - -0.0 5,391,479 - -1.1 5,391,491 + -1.0 5,391,500 + +0.8 5,391,518 + -0.2 5,391,519 - +0.3 5,391,519 - -0.5 5,391,519 - -0.2 5,391,519 - -0.6 5,391,519 - +0.2 5,391,519 - +0.5 5,391,522 + -1.4 5,391,522 + +0.1 5,391,522 + -0.2 5,391,522 + +1.5 5,391,576 + +1.0 5,391,576 + +0.5 5,391,576 + +0.0 5,392,039 - PfGW456L13_4829 0.70 -1.0 5,392,039 - PfGW456L13_4829 0.70 -0.6 5,392,209 + +0.2 5,392,209 + +1.0 5,392,209 + -0.2 5,392,209 + +0.4 5,392,209 + -0.4 5,392,210 - -1.4 5,392,210 - +0.1 5,392,210 - +0.9 5,392,210 - -1.0 5,392,210 - +0.7 5,392,210 - -0.3 5,392,210 - +0.5 5,392,210 - -1.0 5,392,210 - -0.0 5,392,225 - -0.9 5,392,225 - -0.8 5,392,227 + +0.3 5,392,227 + -0.8 5,392,227 + -0.5 5,392,227 + -0.4 5,392,228 - -0.6 5,392,310 + +0.1 5,392,311 - +0.7 5,392,416 + PfGW456L13_4830 0.11 -1.1 5,392,417 - PfGW456L13_4830 0.11 +1.0 5,392,529 + PfGW456L13_4830 0.21 +0.3 5,392,529 + PfGW456L13_4830 0.21 -1.5 5,392,529 + PfGW456L13_4830 0.21 -0.0 5,392,529 + PfGW456L13_4830 0.21 -0.2 5,392,529 + PfGW456L13_4830 0.21 +0.2 5,392,529 + PfGW456L13_4830 0.21 +0.2 5,392,530 - PfGW456L13_4830 0.21 +0.6 5,392,530 - PfGW456L13_4830 0.21 +0.8 5,392,573 + PfGW456L13_4830 0.25 -0.6 5,392,574 - PfGW456L13_4830 0.25 +1.6 5,392,645 + PfGW456L13_4830 0.32 -1.2 5,392,646 - PfGW456L13_4830 0.32 +0.6 5,392,646 - PfGW456L13_4830 0.32 -0.0 5,392,662 + PfGW456L13_4830 0.33 +1.1 5,392,662 + PfGW456L13_4830 0.33 +0.2 5,392,662 + PfGW456L13_4830 0.33 -0.0 5,392,663 - PfGW456L13_4830 0.33 +0.3 5,392,734 + PfGW456L13_4830 0.40 -0.1 5,392,735 - PfGW456L13_4830 0.40 -0.5 5,392,735 - PfGW456L13_4830 0.40 -0.4 5,392,735 - PfGW456L13_4830 0.40 -1.0 5,392,794 - PfGW456L13_4830 0.45 -0.2 5,392,857 + PfGW456L13_4830 0.51 -1.2 5,392,857 + PfGW456L13_4830 0.51 -1.1 5,392,857 + PfGW456L13_4830 0.51 +1.2 5,392,857 + PfGW456L13_4830 0.51 +0.0 5,392,858 - PfGW456L13_4830 0.51 -0.7 5,392,858 - PfGW456L13_4830 0.51 -0.9 5,392,858 - PfGW456L13_4830 0.51 +0.3 5,392,858 - PfGW456L13_4830 0.51 +0.4 5,392,858 - PfGW456L13_4830 0.51 -0.5 5,392,858 - PfGW456L13_4830 0.51 +0.6 5,392,911 + PfGW456L13_4830 0.56 -2.2 5,392,911 + PfGW456L13_4830 0.56 -0.7 5,392,911 + PfGW456L13_4830 0.56 +0.5 5,392,911 + PfGW456L13_4830 0.56 +0.6 5,392,911 + PfGW456L13_4830 0.56 -0.8 5,392,911 + PfGW456L13_4830 0.56 +0.8 5,392,911 + PfGW456L13_4830 0.56 +1.0 5,392,912 - PfGW456L13_4830 0.56 +0.3 5,392,912 - PfGW456L13_4830 0.56 -1.0 5,392,912 - PfGW456L13_4830 0.56 -0.4 5,392,912 - PfGW456L13_4830 0.56 -0.5 5,392,980 + PfGW456L13_4830 0.62 +0.1 5,392,981 - PfGW456L13_4830 0.62 +0.4 5,392,981 - PfGW456L13_4830 0.62 +0.5 5,392,981 - PfGW456L13_4830 0.62 +0.3 5,393,058 + PfGW456L13_4830 0.69 +0.7 5,393,058 + PfGW456L13_4830 0.69 -0.1 5,393,058 + PfGW456L13_4830 0.69 -0.6 5,393,107 - PfGW456L13_4830 0.73 -0.4
Or see this region's nucleotide sequence