Experiment: Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4638 and PfGW456L13_4639 are separated by 13 nucleotides PfGW456L13_4639 and PfGW456L13_4640 are separated by 681 nucleotides PfGW456L13_4640 and PfGW456L13_4641 are separated by 107 nucleotides
PfGW456L13_4638 - Succinylglutamate desuccinylase/aspartoacylase, at 5,175,815 to 5,176,933
_4638
PfGW456L13_4639 - Histidine ABC transporter, ATP-binding protein HisP (TC 3.A.1.3.1), at 5,176,947 to 5,177,711
_4639
PfGW456L13_4640 - FIG00955308: hypothetical protein, at 5,178,393 to 5,178,602
_4640
PfGW456L13_4641 - Deoxycytidine triphosphate deaminase (EC 3.5.4.13), at 5,178,710 to 5,179,276
_4641
Position (kb)
5176
5177
5178 Strain fitness (log2 ratio)
-2
-1
0
1 at 5176.091 kb on + strand, within PfGW456L13_4638 at 5176.350 kb on - strand, within PfGW456L13_4638 at 5176.350 kb on - strand, within PfGW456L13_4638 at 5176.394 kb on + strand, within PfGW456L13_4638 at 5176.395 kb on - strand, within PfGW456L13_4638 at 5176.395 kb on - strand, within PfGW456L13_4638 at 5176.604 kb on + strand, within PfGW456L13_4638 at 5176.605 kb on - strand, within PfGW456L13_4638 at 5176.723 kb on - strand, within PfGW456L13_4638 at 5176.745 kb on + strand, within PfGW456L13_4638 at 5176.745 kb on + strand, within PfGW456L13_4638 at 5176.746 kb on - strand, within PfGW456L13_4638 at 5176.746 kb on - strand, within PfGW456L13_4638 at 5176.746 kb on - strand, within PfGW456L13_4638 at 5176.746 kb on - strand, within PfGW456L13_4638 at 5176.835 kb on + strand at 5176.835 kb on + strand at 5176.835 kb on + strand at 5176.835 kb on + strand at 5176.835 kb on + strand at 5176.835 kb on + strand at 5176.836 kb on - strand at 5176.836 kb on - strand at 5176.836 kb on - strand at 5176.836 kb on - strand at 5176.920 kb on + strand at 5176.920 kb on + strand at 5176.920 kb on + strand at 5176.920 kb on + strand at 5176.920 kb on + strand at 5176.920 kb on + strand at 5176.920 kb on + strand at 5176.920 kb on + strand at 5176.920 kb on + strand at 5176.920 kb on + strand at 5176.921 kb on - strand at 5176.921 kb on - strand at 5176.921 kb on - strand at 5176.921 kb on - strand at 5176.921 kb on - strand at 5176.921 kb on - strand at 5176.921 kb on - strand at 5176.950 kb on + strand at 5176.951 kb on - strand at 5176.951 kb on - strand at 5176.976 kb on + strand at 5176.976 kb on + strand at 5176.976 kb on + strand at 5176.976 kb on + strand at 5176.977 kb on - strand at 5176.977 kb on - strand at 5177.075 kb on + strand, within PfGW456L13_4639 at 5177.075 kb on + strand, within PfGW456L13_4639 at 5177.341 kb on - strand, within PfGW456L13_4639 at 5177.722 kb on + strand at 5177.722 kb on + strand at 5177.814 kb on + strand at 5177.875 kb on - strand at 5177.962 kb on + strand at 5177.962 kb on + strand at 5177.962 kb on + strand at 5177.962 kb on + strand at 5177.962 kb on + strand at 5177.962 kb on + strand at 5177.963 kb on - strand at 5177.963 kb on - strand at 5177.963 kb on - strand at 5177.963 kb on - strand at 5177.966 kb on + strand at 5177.966 kb on + strand at 5177.966 kb on + strand at 5177.967 kb on - strand at 5177.967 kb on - strand at 5177.967 kb on - strand at 5177.967 kb on - strand at 5177.992 kb on + strand at 5177.992 kb on + strand at 5177.992 kb on + strand at 5177.992 kb on + strand at 5177.992 kb on + strand at 5177.992 kb on + strand at 5177.993 kb on - strand at 5177.993 kb on - strand at 5177.998 kb on + strand at 5177.998 kb on + strand at 5177.998 kb on + strand at 5177.999 kb on - strand at 5177.999 kb on - strand at 5178.055 kb on + strand at 5178.056 kb on - strand at 5178.108 kb on + strand at 5178.109 kb on - strand at 5178.109 kb on - strand at 5178.124 kb on + strand at 5178.164 kb on + strand at 5178.175 kb on - strand at 5178.271 kb on + strand at 5178.271 kb on + strand at 5178.271 kb on + strand at 5178.271 kb on + strand at 5178.271 kb on + strand at 5178.272 kb on - strand at 5178.272 kb on - strand at 5178.272 kb on - strand at 5178.272 kb on - strand at 5178.272 kb on - strand at 5178.272 kb on - strand at 5178.272 kb on - strand at 5178.272 kb on - strand at 5178.431 kb on + strand, within PfGW456L13_4640 at 5178.431 kb on + strand, within PfGW456L13_4640 at 5178.449 kb on + strand, within PfGW456L13_4640 at 5178.449 kb on + strand, within PfGW456L13_4640 at 5178.652 kb on + strand at 5178.652 kb on + strand at 5178.652 kb on + strand at 5178.652 kb on + strand at 5178.653 kb on - strand at 5178.653 kb on - strand at 5178.653 kb on - strand at 5178.653 kb on - strand at 5178.653 kb on - strand at 5178.661 kb on + strand at 5178.661 kb on + strand at 5178.662 kb on - strand at 5178.668 kb on + strand at 5178.669 kb on - strand at 5178.669 kb on - strand at 5178.669 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.002 mg/ml remove 5,176,091 + PfGW456L13_4638 0.25 +0.0 5,176,350 - PfGW456L13_4638 0.48 -0.1 5,176,350 - PfGW456L13_4638 0.48 +0.0 5,176,394 + PfGW456L13_4638 0.52 -1.3 5,176,395 - PfGW456L13_4638 0.52 +0.2 5,176,395 - PfGW456L13_4638 0.52 +0.1 5,176,604 + PfGW456L13_4638 0.71 -1.1 5,176,605 - PfGW456L13_4638 0.71 +0.3 5,176,723 - PfGW456L13_4638 0.81 +0.1 5,176,745 + PfGW456L13_4638 0.83 +0.4 5,176,745 + PfGW456L13_4638 0.83 +0.1 5,176,746 - PfGW456L13_4638 0.83 -1.0 5,176,746 - PfGW456L13_4638 0.83 +0.1 5,176,746 - PfGW456L13_4638 0.83 -0.2 5,176,746 - PfGW456L13_4638 0.83 -0.5 5,176,835 + -0.1 5,176,835 + -0.2 5,176,835 + -0.1 5,176,835 + -0.7 5,176,835 + -0.2 5,176,835 + -1.8 5,176,836 - +0.8 5,176,836 - -0.0 5,176,836 - +0.3 5,176,836 - -0.4 5,176,920 + -0.7 5,176,920 + +0.0 5,176,920 + +0.2 5,176,920 + -0.6 5,176,920 + -0.3 5,176,920 + +0.7 5,176,920 + +0.5 5,176,920 + +0.3 5,176,920 + -0.1 5,176,920 + +0.5 5,176,921 - +0.1 5,176,921 - +0.7 5,176,921 - -0.2 5,176,921 - +0.3 5,176,921 - +0.2 5,176,921 - +0.4 5,176,921 - +0.2 5,176,950 + -1.0 5,176,951 - -0.5 5,176,951 - -0.0 5,176,976 + -0.7 5,176,976 + +0.2 5,176,976 + -0.1 5,176,976 + -1.0 5,176,977 - +0.5 5,176,977 - -0.1 5,177,075 + PfGW456L13_4639 0.17 -0.5 5,177,075 + PfGW456L13_4639 0.17 -0.1 5,177,341 - PfGW456L13_4639 0.52 -0.8 5,177,722 + +0.8 5,177,722 + -0.5 5,177,814 + -0.1 5,177,875 - -1.3 5,177,962 + -2.1 5,177,962 + -0.9 5,177,962 + +0.4 5,177,962 + +0.3 5,177,962 + +0.7 5,177,962 + -0.5 5,177,963 - -1.2 5,177,963 - +0.3 5,177,963 - +0.9 5,177,963 - +0.6 5,177,966 + -0.2 5,177,966 + +0.4 5,177,966 + +0.3 5,177,967 - -1.1 5,177,967 - -0.1 5,177,967 - -0.2 5,177,967 - -0.1 5,177,992 + -0.2 5,177,992 + +0.5 5,177,992 + +0.8 5,177,992 + -0.4 5,177,992 + -0.6 5,177,992 + +0.7 5,177,993 - -0.4 5,177,993 - -0.3 5,177,998 + -0.5 5,177,998 + -0.7 5,177,998 + -0.3 5,177,999 - +0.4 5,177,999 - +0.2 5,178,055 + -0.5 5,178,056 - -0.0 5,178,108 + +0.6 5,178,109 - -0.8 5,178,109 - -0.1 5,178,124 + +0.2 5,178,164 + -1.7 5,178,175 - -0.1 5,178,271 + -1.9 5,178,271 + +0.9 5,178,271 + -1.1 5,178,271 + -0.2 5,178,271 + +0.1 5,178,272 - -0.2 5,178,272 - -0.1 5,178,272 - -0.1 5,178,272 - -0.0 5,178,272 - -0.7 5,178,272 - +1.1 5,178,272 - +1.0 5,178,272 - +0.6 5,178,431 + PfGW456L13_4640 0.18 +0.6 5,178,431 + PfGW456L13_4640 0.18 -1.8 5,178,449 + PfGW456L13_4640 0.27 +1.4 5,178,449 + PfGW456L13_4640 0.27 -0.0 5,178,652 + -0.2 5,178,652 + +1.0 5,178,652 + +0.5 5,178,652 + -0.3 5,178,653 - +0.1 5,178,653 - +0.7 5,178,653 - +0.9 5,178,653 - -0.6 5,178,653 - +0.1 5,178,661 + +0.1 5,178,661 + -0.2 5,178,662 - -0.4 5,178,668 + +1.5 5,178,669 - +0.5 5,178,669 - +0.0 5,178,669 - +0.4
Or see this region's nucleotide sequence