Experiment: Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_398 and PfGW456L13_399 are separated by 191 nucleotides PfGW456L13_399 and PfGW456L13_400 are separated by 106 nucleotides PfGW456L13_400 and PfGW456L13_401 overlap by 4 nucleotides
PfGW456L13_398 - 4-aminobutyrate aminotransferase (EC 2.6.1.19), at 457,932 to 460,844
_398
PfGW456L13_399 - dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13), at 461,036 to 461,581
_399
PfGW456L13_400 - Signal transduction histidine kinase regulating C4-dicarboxylate transport system, at 461,688 to 463,496
_400
PfGW456L13_401 - C4-dicarboxylate transport transcriptional regulatory protein, at 463,493 to 464,887
_401
Position (kb) 461
462
463
464 Strain fitness (log2 ratio) -1
0
1
2 at 460.705 kb on + strand at 460.705 kb on + strand at 460.756 kb on + strand at 460.844 kb on + strand at 460.844 kb on + strand at 460.844 kb on + strand at 460.844 kb on + strand at 460.844 kb on + strand at 460.844 kb on + strand at 460.844 kb on + strand at 460.844 kb on + strand at 460.845 kb on - strand at 460.845 kb on - strand at 460.845 kb on - strand at 460.845 kb on - strand at 460.845 kb on - strand at 460.845 kb on - strand at 460.845 kb on - strand at 460.845 kb on - strand at 460.845 kb on - strand at 460.845 kb on - strand at 460.845 kb on - strand at 460.845 kb on - strand at 460.845 kb on - strand at 460.865 kb on - strand at 460.867 kb on + strand at 460.867 kb on + strand at 460.875 kb on + strand at 460.875 kb on + strand at 460.875 kb on + strand at 460.875 kb on + strand at 460.875 kb on + strand at 460.875 kb on + strand at 460.875 kb on + strand at 460.876 kb on - strand at 460.876 kb on - strand at 460.876 kb on - strand at 460.876 kb on - strand at 460.877 kb on + strand at 460.898 kb on + strand at 460.954 kb on - strand at 460.961 kb on + strand at 460.961 kb on + strand at 461.043 kb on + strand at 461.043 kb on + strand at 461.044 kb on - strand at 461.044 kb on - strand at 461.044 kb on - strand at 461.044 kb on - strand at 461.044 kb on - strand at 461.044 kb on - strand at 461.044 kb on - strand at 461.649 kb on + strand at 461.649 kb on + strand at 461.649 kb on + strand at 461.649 kb on + strand at 461.650 kb on - strand at 461.650 kb on - strand at 461.655 kb on + strand at 461.655 kb on + strand at 461.655 kb on + strand at 461.656 kb on - strand at 461.666 kb on + strand at 461.667 kb on - strand at 461.790 kb on + strand at 461.791 kb on - strand at 461.791 kb on - strand at 461.794 kb on - strand at 461.838 kb on + strand at 461.838 kb on + strand at 461.838 kb on + strand at 461.838 kb on + strand at 461.838 kb on + strand at 461.838 kb on + strand at 461.839 kb on - strand at 461.839 kb on - strand at 461.871 kb on + strand, within PfGW456L13_400 at 461.871 kb on + strand, within PfGW456L13_400 at 461.872 kb on - strand, within PfGW456L13_400 at 461.872 kb on - strand, within PfGW456L13_400 at 461.872 kb on - strand, within PfGW456L13_400 at 462.009 kb on + strand, within PfGW456L13_400 at 462.009 kb on + strand, within PfGW456L13_400 at 462.009 kb on + strand, within PfGW456L13_400 at 462.009 kb on + strand, within PfGW456L13_400 at 462.009 kb on + strand, within PfGW456L13_400 at 462.010 kb on - strand, within PfGW456L13_400 at 462.010 kb on - strand, within PfGW456L13_400 at 462.010 kb on - strand, within PfGW456L13_400 at 462.010 kb on - strand, within PfGW456L13_400 at 462.010 kb on - strand, within PfGW456L13_400 at 462.010 kb on - strand, within PfGW456L13_400 at 462.010 kb on - strand, within PfGW456L13_400 at 462.099 kb on + strand, within PfGW456L13_400 at 462.171 kb on + strand, within PfGW456L13_400 at 462.172 kb on - strand, within PfGW456L13_400 at 462.172 kb on - strand, within PfGW456L13_400 at 462.172 kb on - strand, within PfGW456L13_400 at 462.527 kb on + strand, within PfGW456L13_400 at 462.527 kb on + strand, within PfGW456L13_400 at 462.528 kb on - strand, within PfGW456L13_400 at 462.528 kb on - strand, within PfGW456L13_400 at 462.528 kb on - strand, within PfGW456L13_400 at 462.528 kb on - strand, within PfGW456L13_400 at 462.528 kb on - strand, within PfGW456L13_400 at 462.528 kb on - strand, within PfGW456L13_400 at 462.606 kb on + strand, within PfGW456L13_400 at 462.606 kb on + strand, within PfGW456L13_400 at 462.606 kb on + strand, within PfGW456L13_400 at 462.748 kb on + strand, within PfGW456L13_400 at 462.856 kb on - strand, within PfGW456L13_400 at 463.144 kb on + strand, within PfGW456L13_400 at 463.144 kb on + strand, within PfGW456L13_400 at 463.202 kb on + strand, within PfGW456L13_400 at 463.203 kb on - strand, within PfGW456L13_400 at 463.203 kb on - strand, within PfGW456L13_400 at 463.203 kb on - strand, within PfGW456L13_400 at 463.248 kb on + strand, within PfGW456L13_400 at 463.248 kb on + strand, within PfGW456L13_400 at 463.311 kb on + strand, within PfGW456L13_400 at 463.311 kb on + strand, within PfGW456L13_400 at 463.311 kb on + strand, within PfGW456L13_400 at 463.311 kb on + strand, within PfGW456L13_400 at 463.312 kb on - strand, within PfGW456L13_400 at 463.312 kb on - strand, within PfGW456L13_400 at 463.312 kb on - strand, within PfGW456L13_400 at 463.728 kb on + strand, within PfGW456L13_401 at 463.796 kb on + strand, within PfGW456L13_401 at 463.797 kb on - strand, within PfGW456L13_401 at 463.797 kb on - strand, within PfGW456L13_401 at 463.797 kb on - strand, within PfGW456L13_401 at 463.923 kb on + strand, within PfGW456L13_401 at 463.923 kb on + strand, within PfGW456L13_401 at 463.923 kb on + strand, within PfGW456L13_401 at 463.923 kb on + strand, within PfGW456L13_401 at 463.923 kb on + strand, within PfGW456L13_401 at 463.923 kb on + strand, within PfGW456L13_401 at 463.924 kb on - strand, within PfGW456L13_401 at 463.924 kb on - strand, within PfGW456L13_401 at 463.924 kb on - strand, within PfGW456L13_401 at 464.408 kb on + strand, within PfGW456L13_401 at 464.408 kb on + strand, within PfGW456L13_401 at 464.408 kb on + strand, within PfGW456L13_401 at 464.408 kb on + strand, within PfGW456L13_401 at 464.409 kb on - strand, within PfGW456L13_401 at 464.409 kb on - strand, within PfGW456L13_401 at 464.486 kb on + strand, within PfGW456L13_401 at 464.486 kb on + strand, within PfGW456L13_401 at 464.486 kb on + strand, within PfGW456L13_401
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.002 mg/ml remove 460,705 + -0.3 460,705 + +1.3 460,756 + +0.1 460,844 + +0.4 460,844 + +0.3 460,844 + +2.3 460,844 + +0.3 460,844 + +0.7 460,844 + -1.1 460,844 + -0.7 460,844 + -0.0 460,845 - +0.3 460,845 - -0.0 460,845 - +0.7 460,845 - +0.3 460,845 - +0.4 460,845 - +0.1 460,845 - +0.1 460,845 - +0.0 460,845 - -0.3 460,845 - +0.4 460,845 - -0.4 460,845 - +0.2 460,845 - +0.2 460,865 - -1.4 460,867 + +0.2 460,867 + -0.9 460,875 + -0.3 460,875 + -0.3 460,875 + -1.0 460,875 + +0.7 460,875 + +0.0 460,875 + -0.1 460,875 + +2.3 460,876 - +1.0 460,876 - -0.1 460,876 - +0.4 460,876 - -0.3 460,877 + -1.5 460,898 + -0.0 460,954 - +0.0 460,961 + -0.0 460,961 + -0.2 461,043 + +0.5 461,043 + -0.6 461,044 - +1.6 461,044 - -1.3 461,044 - +0.4 461,044 - -1.3 461,044 - +0.8 461,044 - -0.9 461,044 - +0.5 461,649 + +0.1 461,649 + +0.5 461,649 + +1.3 461,649 + +1.4 461,650 - +0.1 461,650 - -0.0 461,655 + +0.1 461,655 + -0.3 461,655 + +0.1 461,656 - +0.6 461,666 + -0.0 461,667 - +1.0 461,790 + +0.6 461,791 - -1.4 461,791 - -0.2 461,794 - +0.5 461,838 + -0.2 461,838 + -0.3 461,838 + -0.0 461,838 + +1.5 461,838 + +1.4 461,838 + -1.5 461,839 - -0.4 461,839 - +1.3 461,871 + PfGW456L13_400 0.10 -0.8 461,871 + PfGW456L13_400 0.10 -0.3 461,872 - PfGW456L13_400 0.10 +0.7 461,872 - PfGW456L13_400 0.10 -0.6 461,872 - PfGW456L13_400 0.10 -0.2 462,009 + PfGW456L13_400 0.18 -0.6 462,009 + PfGW456L13_400 0.18 +0.8 462,009 + PfGW456L13_400 0.18 +1.0 462,009 + PfGW456L13_400 0.18 -0.1 462,009 + PfGW456L13_400 0.18 -0.5 462,010 - PfGW456L13_400 0.18 +0.6 462,010 - PfGW456L13_400 0.18 -0.2 462,010 - PfGW456L13_400 0.18 +0.0 462,010 - PfGW456L13_400 0.18 -0.8 462,010 - PfGW456L13_400 0.18 -0.7 462,010 - PfGW456L13_400 0.18 -0.8 462,010 - PfGW456L13_400 0.18 -0.7 462,099 + PfGW456L13_400 0.23 -0.9 462,171 + PfGW456L13_400 0.27 -0.1 462,172 - PfGW456L13_400 0.27 +0.0 462,172 - PfGW456L13_400 0.27 -0.3 462,172 - PfGW456L13_400 0.27 +0.3 462,527 + PfGW456L13_400 0.46 -0.1 462,527 + PfGW456L13_400 0.46 +0.3 462,528 - PfGW456L13_400 0.46 -1.5 462,528 - PfGW456L13_400 0.46 +1.0 462,528 - PfGW456L13_400 0.46 +0.3 462,528 - PfGW456L13_400 0.46 +0.6 462,528 - PfGW456L13_400 0.46 -0.7 462,528 - PfGW456L13_400 0.46 -0.6 462,606 + PfGW456L13_400 0.51 -0.1 462,606 + PfGW456L13_400 0.51 +0.1 462,606 + PfGW456L13_400 0.51 -1.5 462,748 + PfGW456L13_400 0.59 -0.1 462,856 - PfGW456L13_400 0.65 +0.7 463,144 + PfGW456L13_400 0.80 -0.8 463,144 + PfGW456L13_400 0.80 -0.4 463,202 + PfGW456L13_400 0.84 +0.0 463,203 - PfGW456L13_400 0.84 -0.3 463,203 - PfGW456L13_400 0.84 +0.0 463,203 - PfGW456L13_400 0.84 -1.0 463,248 + PfGW456L13_400 0.86 -0.0 463,248 + PfGW456L13_400 0.86 -0.6 463,311 + PfGW456L13_400 0.90 +0.5 463,311 + PfGW456L13_400 0.90 +0.2 463,311 + PfGW456L13_400 0.90 +0.3 463,311 + PfGW456L13_400 0.90 -0.4 463,312 - PfGW456L13_400 0.90 -0.0 463,312 - PfGW456L13_400 0.90 +0.7 463,312 - PfGW456L13_400 0.90 -0.4 463,728 + PfGW456L13_401 0.17 +0.0 463,796 + PfGW456L13_401 0.22 -0.7 463,797 - PfGW456L13_401 0.22 +0.1 463,797 - PfGW456L13_401 0.22 -0.4 463,797 - PfGW456L13_401 0.22 -0.1 463,923 + PfGW456L13_401 0.31 -0.3 463,923 + PfGW456L13_401 0.31 +0.0 463,923 + PfGW456L13_401 0.31 +0.6 463,923 + PfGW456L13_401 0.31 -1.1 463,923 + PfGW456L13_401 0.31 -0.5 463,923 + PfGW456L13_401 0.31 -0.1 463,924 - PfGW456L13_401 0.31 +0.2 463,924 - PfGW456L13_401 0.31 +0.1 463,924 - PfGW456L13_401 0.31 -1.3 464,408 + PfGW456L13_401 0.66 +0.5 464,408 + PfGW456L13_401 0.66 -0.2 464,408 + PfGW456L13_401 0.66 +0.3 464,408 + PfGW456L13_401 0.66 +0.1 464,409 - PfGW456L13_401 0.66 -1.6 464,409 - PfGW456L13_401 0.66 +0.8 464,486 + PfGW456L13_401 0.71 +0.6 464,486 + PfGW456L13_401 0.71 -0.9 464,486 + PfGW456L13_401 0.71 -0.3
Or see this region's nucleotide sequence