Experiment: Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_3754 and PfGW456L13_3755 are separated by 23 nucleotides PfGW456L13_3755 and PfGW456L13_3756 overlap by 4 nucleotides PfGW456L13_3756 and PfGW456L13_3757 are separated by 3 nucleotides PfGW456L13_3757 and PfGW456L13_3758 are separated by 31 nucleotides
PfGW456L13_3754 - Ring hydroxylating dioxygenase, alpha subunit/Rieske (2Fe-2S) protein (EC 1.14.12.18), at 4,227,333 to 4,228,616
_3754
PfGW456L13_3755 - Amidase (EC 3.5.1.4), at 4,228,640 to 4,229,764
_3755
PfGW456L13_3756 - Succinyl-CoA synthetase, alpha subunit, at 4,229,761 to 4,230,246
_3756
PfGW456L13_3757 - FIG01001988: hypothetical protein, at 4,230,250 to 4,230,621
_3757
PfGW456L13_3758 - Pigment protein, at 4,230,653 to 4,231,816
_3758
Position (kb)
4228
4229
4230 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4228.145 kb on - strand, within PfGW456L13_3754 at 4228.145 kb on - strand, within PfGW456L13_3754 at 4228.168 kb on + strand, within PfGW456L13_3754 at 4228.169 kb on - strand, within PfGW456L13_3754 at 4228.270 kb on + strand, within PfGW456L13_3754 at 4228.532 kb on - strand at 4228.532 kb on - strand at 4228.532 kb on - strand at 4228.600 kb on + strand at 4228.642 kb on - strand at 4228.890 kb on - strand, within PfGW456L13_3755 at 4229.355 kb on + strand, within PfGW456L13_3755 at 4229.355 kb on + strand, within PfGW456L13_3755 at 4229.758 kb on + strand at 4229.758 kb on + strand at 4229.758 kb on + strand at 4229.758 kb on + strand at 4229.759 kb on - strand at 4229.759 kb on - strand at 4229.759 kb on - strand at 4229.794 kb on - strand at 4229.900 kb on + strand, within PfGW456L13_3756 at 4229.901 kb on - strand, within PfGW456L13_3756 at 4229.975 kb on + strand, within PfGW456L13_3756 at 4229.975 kb on + strand, within PfGW456L13_3756 at 4229.975 kb on + strand, within PfGW456L13_3756 at 4229.976 kb on - strand, within PfGW456L13_3756 at 4229.976 kb on - strand, within PfGW456L13_3756 at 4230.174 kb on - strand, within PfGW456L13_3756 at 4230.174 kb on - strand, within PfGW456L13_3756 at 4230.174 kb on - strand, within PfGW456L13_3756 at 4230.251 kb on + strand at 4230.251 kb on + strand at 4230.251 kb on + strand at 4230.251 kb on + strand at 4230.252 kb on - strand at 4230.252 kb on - strand at 4230.252 kb on - strand at 4230.326 kb on + strand, within PfGW456L13_3757 at 4230.327 kb on - strand, within PfGW456L13_3757 at 4230.404 kb on + strand, within PfGW456L13_3757 at 4230.404 kb on + strand, within PfGW456L13_3757 at 4230.404 kb on + strand, within PfGW456L13_3757 at 4230.404 kb on + strand, within PfGW456L13_3757 at 4230.404 kb on + strand, within PfGW456L13_3757 at 4230.404 kb on + strand at 4230.404 kb on + strand, within PfGW456L13_3757 at 4230.404 kb on + strand, within PfGW456L13_3757 at 4230.404 kb on + strand, within PfGW456L13_3757 at 4230.405 kb on - strand, within PfGW456L13_3757 at 4230.405 kb on - strand, within PfGW456L13_3757 at 4230.405 kb on - strand, within PfGW456L13_3757 at 4230.405 kb on - strand, within PfGW456L13_3757 at 4230.405 kb on - strand, within PfGW456L13_3757 at 4230.405 kb on - strand, within PfGW456L13_3757 at 4230.405 kb on - strand, within PfGW456L13_3757 at 4230.406 kb on + strand, within PfGW456L13_3757 at 4230.407 kb on - strand, within PfGW456L13_3757 at 4230.407 kb on - strand, within PfGW456L13_3757 at 4230.407 kb on - strand, within PfGW456L13_3757 at 4230.407 kb on - strand, within PfGW456L13_3757 at 4230.407 kb on - strand, within PfGW456L13_3757 at 4230.660 kb on + strand at 4230.660 kb on + strand at 4230.661 kb on - strand at 4230.661 kb on - strand at 4230.762 kb on + strand at 4230.762 kb on + strand at 4230.762 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.002 mg/ml remove 4,228,145 - PfGW456L13_3754 0.63 +0.6 4,228,145 - PfGW456L13_3754 0.63 -0.5 4,228,168 + PfGW456L13_3754 0.65 +0.5 4,228,169 - PfGW456L13_3754 0.65 +0.2 4,228,270 + PfGW456L13_3754 0.73 +0.5 4,228,532 - +0.2 4,228,532 - -0.8 4,228,532 - +0.8 4,228,600 + -1.5 4,228,642 - +0.6 4,228,890 - PfGW456L13_3755 0.22 -0.2 4,229,355 + PfGW456L13_3755 0.64 -1.8 4,229,355 + PfGW456L13_3755 0.64 -0.2 4,229,758 + -1.1 4,229,758 + -0.0 4,229,758 + +1.2 4,229,758 + -0.0 4,229,759 - +0.0 4,229,759 - -0.5 4,229,759 - -1.8 4,229,794 - +0.2 4,229,900 + PfGW456L13_3756 0.29 -1.2 4,229,901 - PfGW456L13_3756 0.29 -0.2 4,229,975 + PfGW456L13_3756 0.44 -1.3 4,229,975 + PfGW456L13_3756 0.44 -0.1 4,229,975 + PfGW456L13_3756 0.44 +0.6 4,229,976 - PfGW456L13_3756 0.44 -0.0 4,229,976 - PfGW456L13_3756 0.44 +1.1 4,230,174 - PfGW456L13_3756 0.85 -0.9 4,230,174 - PfGW456L13_3756 0.85 -0.1 4,230,174 - PfGW456L13_3756 0.85 +0.1 4,230,251 + -0.6 4,230,251 + +0.2 4,230,251 + +0.1 4,230,251 + -0.9 4,230,252 - -0.1 4,230,252 - -0.6 4,230,252 - +0.4 4,230,326 + PfGW456L13_3757 0.20 +0.8 4,230,327 - PfGW456L13_3757 0.21 +1.0 4,230,404 + PfGW456L13_3757 0.41 +0.2 4,230,404 + PfGW456L13_3757 0.41 +0.4 4,230,404 + PfGW456L13_3757 0.41 +0.6 4,230,404 + PfGW456L13_3757 0.41 +0.1 4,230,404 + PfGW456L13_3757 0.41 +0.2 4,230,404 + +0.1 4,230,404 + PfGW456L13_3757 0.41 -0.2 4,230,404 + PfGW456L13_3757 0.41 -0.5 4,230,404 + PfGW456L13_3757 0.41 -1.2 4,230,405 - PfGW456L13_3757 0.42 +1.6 4,230,405 - PfGW456L13_3757 0.42 -0.4 4,230,405 - PfGW456L13_3757 0.42 -1.3 4,230,405 - PfGW456L13_3757 0.42 +0.9 4,230,405 - PfGW456L13_3757 0.42 +0.9 4,230,405 - PfGW456L13_3757 0.42 -0.8 4,230,405 - PfGW456L13_3757 0.42 +0.1 4,230,406 + PfGW456L13_3757 0.42 -1.8 4,230,407 - PfGW456L13_3757 0.42 -0.5 4,230,407 - PfGW456L13_3757 0.42 +0.7 4,230,407 - PfGW456L13_3757 0.42 -0.8 4,230,407 - PfGW456L13_3757 0.42 +0.5 4,230,407 - PfGW456L13_3757 0.42 +1.6 4,230,660 + +0.2 4,230,660 + +2.2 4,230,661 - -0.5 4,230,661 - -1.5 4,230,762 + -0.8 4,230,762 + +1.0 4,230,762 + -0.5
Or see this region's nucleotide sequence