Experiment: Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_3410 and PfGW456L13_3411 are separated by 39 nucleotides PfGW456L13_3411 and PfGW456L13_3412 are separated by 1 nucleotides
PfGW456L13_3410 - MFS permease, at 3,827,058 to 3,828,644
_3410
PfGW456L13_3411 - Fumarylacetoacetate hydrolase family protein, at 3,828,684 to 3,829,568
_3411
PfGW456L13_3412 - 2,3-dihydroxybiphenyl 1,2-dioxygenase (EC 1.13.11.39), at 3,829,570 to 3,830,520
_3412
Position (kb)
3828
3829
3830 Strain fitness (log2 ratio)
-2
-1
0
1 at 3827.980 kb on - strand, within PfGW456L13_3410 at 3827.998 kb on + strand, within PfGW456L13_3410 at 3827.999 kb on - strand, within PfGW456L13_3410 at 3827.999 kb on - strand, within PfGW456L13_3410 at 3827.999 kb on - strand, within PfGW456L13_3410 at 3828.143 kb on - strand, within PfGW456L13_3410 at 3828.243 kb on + strand, within PfGW456L13_3410 at 3828.243 kb on + strand at 3828.244 kb on - strand, within PfGW456L13_3410 at 3828.244 kb on - strand, within PfGW456L13_3410 at 3828.318 kb on + strand, within PfGW456L13_3410 at 3828.346 kb on + strand, within PfGW456L13_3410 at 3828.395 kb on + strand, within PfGW456L13_3410 at 3828.398 kb on + strand, within PfGW456L13_3410 at 3828.399 kb on - strand, within PfGW456L13_3410 at 3828.399 kb on - strand, within PfGW456L13_3410 at 3828.399 kb on - strand, within PfGW456L13_3410 at 3828.608 kb on + strand at 3828.608 kb on + strand at 3828.608 kb on + strand at 3828.609 kb on - strand at 3828.662 kb on + strand at 3828.665 kb on - strand at 3828.685 kb on + strand at 3828.685 kb on + strand at 3828.685 kb on + strand at 3828.686 kb on - strand at 3828.884 kb on + strand, within PfGW456L13_3411 at 3828.884 kb on + strand, within PfGW456L13_3411 at 3828.885 kb on - strand, within PfGW456L13_3411 at 3828.885 kb on - strand, within PfGW456L13_3411 at 3828.898 kb on + strand, within PfGW456L13_3411 at 3828.898 kb on + strand, within PfGW456L13_3411 at 3829.285 kb on + strand, within PfGW456L13_3411 at 3829.285 kb on + strand, within PfGW456L13_3411 at 3829.286 kb on - strand, within PfGW456L13_3411 at 3829.286 kb on - strand, within PfGW456L13_3411 at 3829.339 kb on + strand, within PfGW456L13_3411 at 3829.497 kb on - strand at 3829.586 kb on + strand at 3829.587 kb on - strand at 3829.701 kb on - strand, within PfGW456L13_3412 at 3829.770 kb on - strand, within PfGW456L13_3412 at 3829.848 kb on - strand, within PfGW456L13_3412 at 3829.848 kb on - strand, within PfGW456L13_3412 at 3829.848 kb on - strand, within PfGW456L13_3412 at 3829.925 kb on + strand, within PfGW456L13_3412 at 3830.003 kb on + strand, within PfGW456L13_3412 at 3830.055 kb on - strand, within PfGW456L13_3412 at 3830.327 kb on + strand, within PfGW456L13_3412 at 3830.327 kb on + strand, within PfGW456L13_3412 at 3830.327 kb on + strand, within PfGW456L13_3412 at 3830.328 kb on - strand, within PfGW456L13_3412 at 3830.328 kb on - strand, within PfGW456L13_3412 at 3830.393 kb on + strand, within PfGW456L13_3412 at 3830.456 kb on + strand at 3830.498 kb on + strand at 3830.498 kb on + strand at 3830.498 kb on + strand at 3830.498 kb on + strand at 3830.523 kb on + strand at 3830.524 kb on - strand at 3830.536 kb on - strand at 3830.536 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.002 mg/ml remove 3,827,980 - PfGW456L13_3410 0.58 -0.8 3,827,998 + PfGW456L13_3410 0.59 +0.4 3,827,999 - PfGW456L13_3410 0.59 -0.1 3,827,999 - PfGW456L13_3410 0.59 -0.6 3,827,999 - PfGW456L13_3410 0.59 +0.1 3,828,143 - PfGW456L13_3410 0.68 +0.1 3,828,243 + PfGW456L13_3410 0.75 -0.3 3,828,243 + -0.2 3,828,244 - PfGW456L13_3410 0.75 -1.9 3,828,244 - PfGW456L13_3410 0.75 -0.3 3,828,318 + PfGW456L13_3410 0.79 +0.0 3,828,346 + PfGW456L13_3410 0.81 -0.3 3,828,395 + PfGW456L13_3410 0.84 +0.5 3,828,398 + PfGW456L13_3410 0.84 +0.3 3,828,399 - PfGW456L13_3410 0.84 +0.0 3,828,399 - PfGW456L13_3410 0.84 +0.7 3,828,399 - PfGW456L13_3410 0.84 +0.4 3,828,608 + -1.5 3,828,608 + +1.1 3,828,608 + -0.5 3,828,609 - -0.0 3,828,662 + -1.4 3,828,665 - -1.3 3,828,685 + -0.2 3,828,685 + +0.0 3,828,685 + -1.0 3,828,686 - +0.7 3,828,884 + PfGW456L13_3411 0.23 +0.5 3,828,884 + PfGW456L13_3411 0.23 -0.4 3,828,885 - PfGW456L13_3411 0.23 +0.1 3,828,885 - PfGW456L13_3411 0.23 -0.6 3,828,898 + PfGW456L13_3411 0.24 -1.0 3,828,898 + PfGW456L13_3411 0.24 +0.5 3,829,285 + PfGW456L13_3411 0.68 -0.5 3,829,285 + PfGW456L13_3411 0.68 -2.5 3,829,286 - PfGW456L13_3411 0.68 +0.1 3,829,286 - PfGW456L13_3411 0.68 -0.6 3,829,339 + PfGW456L13_3411 0.74 -0.6 3,829,497 - +0.1 3,829,586 + -1.4 3,829,587 - +0.6 3,829,701 - PfGW456L13_3412 0.14 -0.9 3,829,770 - PfGW456L13_3412 0.21 -0.2 3,829,848 - PfGW456L13_3412 0.29 +1.4 3,829,848 - PfGW456L13_3412 0.29 -0.6 3,829,848 - PfGW456L13_3412 0.29 -0.6 3,829,925 + PfGW456L13_3412 0.37 +0.2 3,830,003 + PfGW456L13_3412 0.46 +0.2 3,830,055 - PfGW456L13_3412 0.51 +0.0 3,830,327 + PfGW456L13_3412 0.80 +0.2 3,830,327 + PfGW456L13_3412 0.80 -1.3 3,830,327 + PfGW456L13_3412 0.80 +0.6 3,830,328 - PfGW456L13_3412 0.80 +0.3 3,830,328 - PfGW456L13_3412 0.80 -0.2 3,830,393 + PfGW456L13_3412 0.87 +0.4 3,830,456 + +0.3 3,830,498 + -0.2 3,830,498 + +1.0 3,830,498 + -0.2 3,830,498 + +0.7 3,830,523 + +0.0 3,830,524 - -0.8 3,830,536 - -0.4 3,830,536 - +0.3
Or see this region's nucleotide sequence