Experiment: Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2522 and PfGW456L13_2523 are separated by 228 nucleotides PfGW456L13_2523 and PfGW456L13_2524 are separated by 13 nucleotides PfGW456L13_2524 and PfGW456L13_2525 overlap by 13 nucleotides
PfGW456L13_2522 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), at 2,789,036 to 2,789,782
_2522
PfGW456L13_2523 - Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-), at 2,790,011 to 2,791,093
_2523
PfGW456L13_2524 - Short-chain dehydrogenase/reductase SDR, at 2,791,107 to 2,791,862
_2524
PfGW456L13_2525 - Fumarate reductase flavoprotein subunit (EC 1.3.99.1), at 2,791,850 to 2,793,529
_2525
Position (kb)
2790
2791
2792 Strain fitness (log2 ratio)
-1
0
1
2 at 2789.347 kb on + strand, within PfGW456L13_2522 at 2789.348 kb on - strand, within PfGW456L13_2522 at 2789.349 kb on + strand, within PfGW456L13_2522 at 2789.349 kb on + strand, within PfGW456L13_2522 at 2789.350 kb on - strand, within PfGW456L13_2522 at 2789.350 kb on - strand, within PfGW456L13_2522 at 2789.350 kb on - strand, within PfGW456L13_2522 at 2789.442 kb on + strand, within PfGW456L13_2522 at 2789.556 kb on - strand, within PfGW456L13_2522 at 2789.604 kb on - strand, within PfGW456L13_2522 at 2789.764 kb on + strand at 2789.764 kb on + strand at 2789.782 kb on + strand at 2789.782 kb on + strand at 2789.810 kb on - strand at 2789.866 kb on - strand at 2789.900 kb on + strand at 2789.900 kb on + strand at 2789.943 kb on - strand at 2790.026 kb on - strand at 2790.618 kb on + strand, within PfGW456L13_2523 at 2790.619 kb on - strand, within PfGW456L13_2523 at 2790.948 kb on + strand, within PfGW456L13_2523 at 2791.501 kb on + strand, within PfGW456L13_2524 at 2791.502 kb on - strand, within PfGW456L13_2524 at 2791.519 kb on + strand, within PfGW456L13_2524 at 2791.519 kb on + strand, within PfGW456L13_2524 at 2791.614 kb on + strand, within PfGW456L13_2524 at 2791.614 kb on + strand, within PfGW456L13_2524 at 2791.614 kb on + strand, within PfGW456L13_2524 at 2791.615 kb on - strand, within PfGW456L13_2524 at 2791.762 kb on - strand, within PfGW456L13_2524 at 2791.765 kb on - strand, within PfGW456L13_2524 at 2791.765 kb on - strand, within PfGW456L13_2524 at 2791.851 kb on + strand at 2791.851 kb on + strand at 2791.852 kb on - strand at 2791.968 kb on + strand at 2791.968 kb on + strand at 2791.969 kb on - strand at 2791.969 kb on - strand at 2791.969 kb on - strand at 2792.011 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.002 mg/ml remove 2,789,347 + PfGW456L13_2522 0.42 -0.5 2,789,348 - PfGW456L13_2522 0.42 +0.2 2,789,349 + PfGW456L13_2522 0.42 +1.2 2,789,349 + PfGW456L13_2522 0.42 -0.6 2,789,350 - PfGW456L13_2522 0.42 -0.2 2,789,350 - PfGW456L13_2522 0.42 +0.7 2,789,350 - PfGW456L13_2522 0.42 -0.1 2,789,442 + PfGW456L13_2522 0.54 +0.3 2,789,556 - PfGW456L13_2522 0.70 +0.1 2,789,604 - PfGW456L13_2522 0.76 -0.3 2,789,764 + -0.8 2,789,764 + +0.2 2,789,782 + -1.5 2,789,782 + -0.4 2,789,810 - -0.2 2,789,866 - -0.0 2,789,900 + -0.3 2,789,900 + -0.5 2,789,943 - +0.0 2,790,026 - +0.1 2,790,618 + PfGW456L13_2523 0.56 -0.4 2,790,619 - PfGW456L13_2523 0.56 -0.1 2,790,948 + PfGW456L13_2523 0.87 -1.0 2,791,501 + PfGW456L13_2524 0.52 +0.7 2,791,502 - PfGW456L13_2524 0.52 +0.1 2,791,519 + PfGW456L13_2524 0.54 +0.8 2,791,519 + PfGW456L13_2524 0.54 +0.5 2,791,614 + PfGW456L13_2524 0.67 +1.9 2,791,614 + PfGW456L13_2524 0.67 -1.1 2,791,614 + PfGW456L13_2524 0.67 -0.5 2,791,615 - PfGW456L13_2524 0.67 -1.1 2,791,762 - PfGW456L13_2524 0.87 -0.2 2,791,765 - PfGW456L13_2524 0.87 -0.8 2,791,765 - PfGW456L13_2524 0.87 +1.3 2,791,851 + +0.2 2,791,851 + -0.8 2,791,852 - -0.6 2,791,968 + +0.1 2,791,968 + -0.4 2,791,969 - -0.7 2,791,969 - -0.7 2,791,969 - +1.8 2,792,011 - -0.7
Or see this region's nucleotide sequence