Experiment: Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2435 and PfGW456L13_2436 are separated by 154 nucleotides PfGW456L13_2436 and PfGW456L13_2437 are separated by 11 nucleotides PfGW456L13_2437 and PfGW456L13_2438 overlap by 27 nucleotides
PfGW456L13_2435 - Phenylacetic acid degradation protein PaaY, at 2,699,451 to 2,700,047
_2435
PfGW456L13_2436 - Phenylacetic acid degradation operon negative regulatory protein PaaX, at 2,700,202 to 2,701,125
_2436
PfGW456L13_2437 - hypothetical protein, at 2,701,137 to 2,701,253
_2437
PfGW456L13_2438 - Transcriptional activator feaR, at 2,701,227 to 2,702,141
_2438
Position (kb)
2700
2701
2702 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2699.202 kb on + strand at 2699.202 kb on + strand at 2699.203 kb on - strand at 2699.225 kb on + strand at 2699.225 kb on + strand at 2699.226 kb on - strand at 2699.314 kb on + strand at 2699.314 kb on + strand at 2699.314 kb on + strand at 2699.314 kb on + strand at 2699.314 kb on + strand at 2699.314 kb on + strand at 2699.314 kb on + strand at 2699.314 kb on + strand at 2699.315 kb on - strand at 2699.315 kb on - strand at 2699.356 kb on + strand at 2699.377 kb on + strand at 2699.460 kb on + strand at 2699.460 kb on + strand at 2699.502 kb on + strand at 2699.502 kb on + strand at 2699.502 kb on + strand at 2699.503 kb on - strand at 2699.503 kb on - strand at 2699.503 kb on - strand at 2699.503 kb on - strand at 2699.503 kb on - strand at 2699.556 kb on + strand, within PfGW456L13_2435 at 2699.556 kb on + strand, within PfGW456L13_2435 at 2699.556 kb on + strand, within PfGW456L13_2435 at 2699.556 kb on + strand, within PfGW456L13_2435 at 2699.557 kb on - strand, within PfGW456L13_2435 at 2699.557 kb on - strand, within PfGW456L13_2435 at 2699.557 kb on - strand, within PfGW456L13_2435 at 2699.925 kb on + strand, within PfGW456L13_2435 at 2700.038 kb on + strand at 2700.170 kb on - strand at 2700.171 kb on + strand at 2700.448 kb on + strand, within PfGW456L13_2436 at 2700.448 kb on + strand, within PfGW456L13_2436 at 2700.448 kb on + strand, within PfGW456L13_2436 at 2700.449 kb on - strand, within PfGW456L13_2436 at 2700.449 kb on - strand, within PfGW456L13_2436 at 2700.449 kb on - strand, within PfGW456L13_2436 at 2700.451 kb on + strand at 2700.451 kb on + strand, within PfGW456L13_2436 at 2700.451 kb on + strand, within PfGW456L13_2436 at 2700.451 kb on + strand, within PfGW456L13_2436 at 2700.452 kb on - strand, within PfGW456L13_2436 at 2700.452 kb on - strand, within PfGW456L13_2436 at 2700.506 kb on - strand, within PfGW456L13_2436 at 2700.737 kb on + strand, within PfGW456L13_2436 at 2700.737 kb on + strand, within PfGW456L13_2436 at 2700.737 kb on + strand, within PfGW456L13_2436 at 2700.806 kb on - strand, within PfGW456L13_2436 at 2701.099 kb on + strand at 2701.100 kb on - strand at 2701.123 kb on + strand at 2701.123 kb on + strand at 2701.123 kb on + strand at 2701.123 kb on + strand at 2701.124 kb on - strand at 2701.124 kb on - strand at 2701.124 kb on - strand at 2701.124 kb on - strand at 2701.124 kb on - strand at 2701.193 kb on + strand, within PfGW456L13_2437 at 2701.193 kb on + strand, within PfGW456L13_2437 at 2701.194 kb on - strand, within PfGW456L13_2437 at 2701.194 kb on - strand, within PfGW456L13_2437 at 2701.194 kb on - strand, within PfGW456L13_2437 at 2701.194 kb on - strand, within PfGW456L13_2437 at 2701.194 kb on - strand, within PfGW456L13_2437 at 2701.194 kb on - strand, within PfGW456L13_2437 at 2701.194 kb on - strand, within PfGW456L13_2437 at 2701.194 kb on - strand, within PfGW456L13_2437 at 2701.201 kb on - strand, within PfGW456L13_2437 at 2701.206 kb on + strand, within PfGW456L13_2437 at 2701.206 kb on + strand, within PfGW456L13_2437 at 2701.207 kb on - strand, within PfGW456L13_2437 at 2701.207 kb on - strand, within PfGW456L13_2437 at 2701.340 kb on + strand, within PfGW456L13_2438 at 2701.341 kb on - strand, within PfGW456L13_2438 at 2701.341 kb on - strand, within PfGW456L13_2438 at 2701.350 kb on + strand, within PfGW456L13_2438 at 2701.405 kb on - strand, within PfGW456L13_2438 at 2701.446 kb on + strand, within PfGW456L13_2438 at 2701.446 kb on + strand, within PfGW456L13_2438 at 2701.447 kb on - strand, within PfGW456L13_2438 at 2701.563 kb on + strand, within PfGW456L13_2438 at 2701.563 kb on + strand, within PfGW456L13_2438 at 2701.907 kb on + strand, within PfGW456L13_2438 at 2701.908 kb on - strand at 2701.908 kb on - strand, within PfGW456L13_2438 at 2701.908 kb on - strand, within PfGW456L13_2438 at 2701.965 kb on + strand, within PfGW456L13_2438 at 2701.966 kb on - strand, within PfGW456L13_2438 at 2702.046 kb on + strand, within PfGW456L13_2438 at 2702.046 kb on + strand, within PfGW456L13_2438
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.002 mg/ml remove 2,699,202 + +0.1 2,699,202 + -0.4 2,699,203 - +0.5 2,699,225 + -0.1 2,699,225 + -0.8 2,699,226 - +0.2 2,699,314 + -0.3 2,699,314 + +0.3 2,699,314 + -0.3 2,699,314 + +1.9 2,699,314 + +0.2 2,699,314 + -0.4 2,699,314 + +1.3 2,699,314 + +0.5 2,699,315 - -1.4 2,699,315 - -0.6 2,699,356 + -0.0 2,699,377 + +0.3 2,699,460 + -0.5 2,699,460 + -0.2 2,699,502 + -0.9 2,699,502 + +0.1 2,699,502 + -0.5 2,699,503 - -0.5 2,699,503 - +2.7 2,699,503 - +1.5 2,699,503 - +0.7 2,699,503 - -0.4 2,699,556 + PfGW456L13_2435 0.18 +1.4 2,699,556 + PfGW456L13_2435 0.18 +0.2 2,699,556 + PfGW456L13_2435 0.18 +1.1 2,699,556 + PfGW456L13_2435 0.18 +0.9 2,699,557 - PfGW456L13_2435 0.18 -2.1 2,699,557 - PfGW456L13_2435 0.18 +0.4 2,699,557 - PfGW456L13_2435 0.18 -0.5 2,699,925 + PfGW456L13_2435 0.79 -0.1 2,700,038 + +0.6 2,700,170 - -0.6 2,700,171 + +1.5 2,700,448 + PfGW456L13_2436 0.27 -1.6 2,700,448 + PfGW456L13_2436 0.27 -0.9 2,700,448 + PfGW456L13_2436 0.27 -1.0 2,700,449 - PfGW456L13_2436 0.27 +0.5 2,700,449 - PfGW456L13_2436 0.27 +0.1 2,700,449 - PfGW456L13_2436 0.27 -0.7 2,700,451 + -1.6 2,700,451 + PfGW456L13_2436 0.27 +2.3 2,700,451 + PfGW456L13_2436 0.27 -0.9 2,700,451 + PfGW456L13_2436 0.27 -1.4 2,700,452 - PfGW456L13_2436 0.27 -2.3 2,700,452 - PfGW456L13_2436 0.27 -1.1 2,700,506 - PfGW456L13_2436 0.33 -1.3 2,700,737 + PfGW456L13_2436 0.58 -0.9 2,700,737 + PfGW456L13_2436 0.58 +0.3 2,700,737 + PfGW456L13_2436 0.58 -0.1 2,700,806 - PfGW456L13_2436 0.65 +0.7 2,701,099 + -1.1 2,701,100 - +1.4 2,701,123 + -0.4 2,701,123 + -0.3 2,701,123 + -0.1 2,701,123 + -0.9 2,701,124 - +0.5 2,701,124 - -0.2 2,701,124 - +0.6 2,701,124 - -0.7 2,701,124 - -0.2 2,701,193 + PfGW456L13_2437 0.48 +0.1 2,701,193 + PfGW456L13_2437 0.48 +0.0 2,701,194 - PfGW456L13_2437 0.49 +0.6 2,701,194 - PfGW456L13_2437 0.49 -0.3 2,701,194 - PfGW456L13_2437 0.49 -0.5 2,701,194 - PfGW456L13_2437 0.49 +0.7 2,701,194 - PfGW456L13_2437 0.49 -0.0 2,701,194 - PfGW456L13_2437 0.49 -1.1 2,701,194 - PfGW456L13_2437 0.49 +0.9 2,701,194 - PfGW456L13_2437 0.49 -0.1 2,701,201 - PfGW456L13_2437 0.55 +0.5 2,701,206 + PfGW456L13_2437 0.59 -0.0 2,701,206 + PfGW456L13_2437 0.59 -0.2 2,701,207 - PfGW456L13_2437 0.60 -0.6 2,701,207 - PfGW456L13_2437 0.60 -1.2 2,701,340 + PfGW456L13_2438 0.12 -0.6 2,701,341 - PfGW456L13_2438 0.12 +0.7 2,701,341 - PfGW456L13_2438 0.12 -0.1 2,701,350 + PfGW456L13_2438 0.13 +0.4 2,701,405 - PfGW456L13_2438 0.19 -2.4 2,701,446 + PfGW456L13_2438 0.24 +0.3 2,701,446 + PfGW456L13_2438 0.24 +0.5 2,701,447 - PfGW456L13_2438 0.24 +0.3 2,701,563 + PfGW456L13_2438 0.37 +0.5 2,701,563 + PfGW456L13_2438 0.37 -0.4 2,701,907 + PfGW456L13_2438 0.74 -1.0 2,701,908 - +2.3 2,701,908 - PfGW456L13_2438 0.74 +1.7 2,701,908 - PfGW456L13_2438 0.74 +1.5 2,701,965 + PfGW456L13_2438 0.81 +0.1 2,701,966 - PfGW456L13_2438 0.81 +0.8 2,702,046 + PfGW456L13_2438 0.90 +0.1 2,702,046 + PfGW456L13_2438 0.90 -0.6
Or see this region's nucleotide sequence