Experiment: Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2425 and PfGW456L13_2426 are separated by 8 nucleotides PfGW456L13_2426 and PfGW456L13_2427 are separated by 28 nucleotides
PfGW456L13_2425 - Phenylacetate-CoA oxygenase, PaaI subunit, at 2,689,684 to 2,690,445
_2425
PfGW456L13_2426 - Phenylacetate-CoA oxygenase, PaaH subunit, at 2,690,454 to 2,690,735
_2426
PfGW456L13_2427 - Phenylacetate-CoA oxygenase, PaaG subunit, at 2,690,764 to 2,691,753
_2427
Position (kb)
2690
2691
2692 Strain fitness (log2 ratio)
-2
-1
0
1 at 2689.787 kb on + strand, within PfGW456L13_2425 at 2689.787 kb on + strand, within PfGW456L13_2425 at 2689.787 kb on + strand, within PfGW456L13_2425 at 2689.787 kb on + strand, within PfGW456L13_2425 at 2689.788 kb on - strand, within PfGW456L13_2425 at 2689.788 kb on - strand, within PfGW456L13_2425 at 2690.039 kb on + strand, within PfGW456L13_2425 at 2690.039 kb on + strand, within PfGW456L13_2425 at 2690.039 kb on + strand, within PfGW456L13_2425 at 2690.039 kb on + strand, within PfGW456L13_2425 at 2690.039 kb on + strand, within PfGW456L13_2425 at 2690.039 kb on + strand, within PfGW456L13_2425 at 2690.040 kb on - strand, within PfGW456L13_2425 at 2690.040 kb on - strand, within PfGW456L13_2425 at 2690.040 kb on - strand, within PfGW456L13_2425 at 2690.040 kb on - strand, within PfGW456L13_2425 at 2690.040 kb on - strand, within PfGW456L13_2425 at 2690.040 kb on - strand, within PfGW456L13_2425 at 2690.136 kb on - strand, within PfGW456L13_2425 at 2690.417 kb on + strand at 2690.418 kb on - strand at 2690.439 kb on + strand at 2690.440 kb on - strand at 2690.504 kb on - strand, within PfGW456L13_2426 at 2690.614 kb on + strand, within PfGW456L13_2426 at 2690.615 kb on - strand, within PfGW456L13_2426 at 2690.615 kb on - strand, within PfGW456L13_2426 at 2690.901 kb on - strand, within PfGW456L13_2427 at 2691.266 kb on + strand, within PfGW456L13_2427 at 2691.386 kb on + strand, within PfGW456L13_2427 at 2691.386 kb on + strand, within PfGW456L13_2427 at 2691.387 kb on - strand, within PfGW456L13_2427 at 2691.387 kb on - strand, within PfGW456L13_2427 at 2691.458 kb on + strand, within PfGW456L13_2427 at 2691.458 kb on + strand, within PfGW456L13_2427 at 2691.459 kb on - strand, within PfGW456L13_2427 at 2691.459 kb on - strand, within PfGW456L13_2427 at 2691.459 kb on - strand, within PfGW456L13_2427 at 2691.464 kb on + strand, within PfGW456L13_2427 at 2691.464 kb on + strand, within PfGW456L13_2427 at 2691.465 kb on - strand, within PfGW456L13_2427 at 2691.715 kb on + strand at 2691.715 kb on + strand at 2691.716 kb on - strand at 2691.736 kb on + strand at 2691.736 kb on + strand at 2691.800 kb on + strand at 2691.816 kb on + strand at 2691.843 kb on + strand at 2691.843 kb on + strand at 2691.891 kb on + strand at 2691.891 kb on + strand at 2691.891 kb on + strand at 2691.892 kb on - strand at 2691.892 kb on - strand at 2691.892 kb on - strand at 2691.892 kb on - strand at 2691.892 kb on - strand at 2691.892 kb on - strand at 2691.895 kb on + strand at 2691.896 kb on - strand at 2691.896 kb on - strand at 2691.896 kb on - strand at 2691.896 kb on - strand at 2691.896 kb on - strand at 2692.083 kb on - strand at 2692.083 kb on - strand at 2692.083 kb on - strand at 2692.083 kb on - strand at 2692.391 kb on + strand at 2692.406 kb on + strand at 2692.407 kb on - strand at 2692.407 kb on - strand at 2692.462 kb on + strand at 2692.462 kb on + strand at 2692.504 kb on + strand at 2692.504 kb on + strand at 2692.504 kb on + strand at 2692.505 kb on - strand at 2692.505 kb on - strand at 2692.519 kb on + strand at 2692.519 kb on + strand at 2692.519 kb on + strand at 2692.520 kb on - strand at 2692.520 kb on - strand at 2692.688 kb on - strand at 2692.688 kb on - strand at 2692.688 kb on - strand at 2692.716 kb on + strand at 2692.730 kb on + strand at 2692.730 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.002 mg/ml remove 2,689,787 + PfGW456L13_2425 0.14 +0.2 2,689,787 + PfGW456L13_2425 0.14 +0.2 2,689,787 + PfGW456L13_2425 0.14 -1.1 2,689,787 + PfGW456L13_2425 0.14 +1.1 2,689,788 - PfGW456L13_2425 0.14 -0.4 2,689,788 - PfGW456L13_2425 0.14 -0.2 2,690,039 + PfGW456L13_2425 0.47 -0.5 2,690,039 + PfGW456L13_2425 0.47 +0.3 2,690,039 + PfGW456L13_2425 0.47 +0.1 2,690,039 + PfGW456L13_2425 0.47 -2.3 2,690,039 + PfGW456L13_2425 0.47 -0.8 2,690,039 + PfGW456L13_2425 0.47 +0.1 2,690,040 - PfGW456L13_2425 0.47 +0.4 2,690,040 - PfGW456L13_2425 0.47 +0.8 2,690,040 - PfGW456L13_2425 0.47 +0.7 2,690,040 - PfGW456L13_2425 0.47 +0.3 2,690,040 - PfGW456L13_2425 0.47 -1.6 2,690,040 - PfGW456L13_2425 0.47 -0.4 2,690,136 - PfGW456L13_2425 0.59 -0.3 2,690,417 + -0.2 2,690,418 - -1.0 2,690,439 + -0.2 2,690,440 - +0.2 2,690,504 - PfGW456L13_2426 0.18 +0.2 2,690,614 + PfGW456L13_2426 0.57 +0.3 2,690,615 - PfGW456L13_2426 0.57 +0.2 2,690,615 - PfGW456L13_2426 0.57 +0.4 2,690,901 - PfGW456L13_2427 0.14 -1.3 2,691,266 + PfGW456L13_2427 0.51 -1.4 2,691,386 + PfGW456L13_2427 0.63 -0.5 2,691,386 + PfGW456L13_2427 0.63 -1.6 2,691,387 - PfGW456L13_2427 0.63 +1.4 2,691,387 - PfGW456L13_2427 0.63 -0.7 2,691,458 + PfGW456L13_2427 0.70 -1.1 2,691,458 + PfGW456L13_2427 0.70 +0.1 2,691,459 - PfGW456L13_2427 0.70 -0.2 2,691,459 - PfGW456L13_2427 0.70 -0.3 2,691,459 - PfGW456L13_2427 0.70 -0.3 2,691,464 + PfGW456L13_2427 0.71 -0.8 2,691,464 + PfGW456L13_2427 0.71 +1.2 2,691,465 - PfGW456L13_2427 0.71 -1.1 2,691,715 + -0.8 2,691,715 + +0.0 2,691,716 - -0.7 2,691,736 + -0.2 2,691,736 + -1.6 2,691,800 + -1.7 2,691,816 + +0.4 2,691,843 + -0.2 2,691,843 + -0.1 2,691,891 + +0.5 2,691,891 + +1.1 2,691,891 + +1.0 2,691,892 - -0.3 2,691,892 - +0.3 2,691,892 - +0.2 2,691,892 - +0.4 2,691,892 - -0.2 2,691,892 - +0.3 2,691,895 + -0.8 2,691,896 - -0.3 2,691,896 - +0.9 2,691,896 - -0.3 2,691,896 - -0.1 2,691,896 - -0.7 2,692,083 - +1.3 2,692,083 - +0.6 2,692,083 - -0.1 2,692,083 - -0.0 2,692,391 + -0.2 2,692,406 + -1.0 2,692,407 - +0.4 2,692,407 - +1.0 2,692,462 + -0.2 2,692,462 + -0.4 2,692,504 + -1.3 2,692,504 + -0.3 2,692,504 + +0.2 2,692,505 - +0.0 2,692,505 - -1.0 2,692,519 + -1.2 2,692,519 + -0.1 2,692,519 + +0.2 2,692,520 - -0.6 2,692,520 - +0.6 2,692,688 - -0.4 2,692,688 - -0.9 2,692,688 - +0.0 2,692,716 + -0.0 2,692,730 + -1.1 2,692,730 + +0.7
Or see this region's nucleotide sequence