Experiment: Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2189 and PfGW456L13_2190 are separated by 965 nucleotides PfGW456L13_2190 and PfGW456L13_2191 are separated by 83 nucleotides
PfGW456L13_2189 - UDP-2,3-diacetamido-2,3-dideoxy-D-mannuronic acid transferase, at 2,400,934 to 2,402,193
_2189
PfGW456L13_2190 - Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-), at 2,403,159 to 2,404,190
_2190
PfGW456L13_2191 - nucleotide sugar epimerase/dehydratase WbpM, at 2,404,274 to 2,406,268
_2191
Position (kb)
2403
2404
2405 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2402.295 kb on - strand at 2402.299 kb on - strand at 2402.312 kb on + strand at 2402.312 kb on + strand at 2402.402 kb on + strand at 2402.403 kb on - strand at 2402.426 kb on + strand at 2402.427 kb on - strand at 2402.533 kb on - strand at 2402.539 kb on - strand at 2402.555 kb on + strand at 2402.587 kb on + strand at 2402.587 kb on + strand at 2402.587 kb on + strand at 2402.588 kb on - strand at 2402.588 kb on - strand at 2402.588 kb on - strand at 2402.588 kb on - strand at 2402.748 kb on + strand at 2402.748 kb on + strand at 2402.749 kb on - strand at 2402.749 kb on - strand at 2402.766 kb on + strand at 2402.767 kb on - strand at 2402.799 kb on + strand at 2402.799 kb on + strand at 2402.913 kb on + strand at 2402.914 kb on - strand at 2402.914 kb on - strand at 2402.966 kb on + strand at 2402.967 kb on - strand at 2402.969 kb on + strand at 2402.969 kb on + strand at 2402.969 kb on + strand at 2402.969 kb on + strand at 2402.969 kb on + strand at 2402.987 kb on + strand at 2402.990 kb on + strand at 2402.990 kb on + strand at 2402.990 kb on + strand at 2402.991 kb on - strand at 2403.066 kb on + strand at 2403.136 kb on + strand at 2403.209 kb on - strand at 2403.334 kb on + strand, within PfGW456L13_2190 at 2403.407 kb on - strand, within PfGW456L13_2190 at 2403.409 kb on + strand, within PfGW456L13_2190 at 2403.409 kb on + strand, within PfGW456L13_2190 at 2403.410 kb on - strand, within PfGW456L13_2190 at 2403.410 kb on - strand, within PfGW456L13_2190 at 2403.410 kb on - strand, within PfGW456L13_2190 at 2403.426 kb on - strand, within PfGW456L13_2190 at 2403.444 kb on - strand, within PfGW456L13_2190 at 2403.514 kb on + strand, within PfGW456L13_2190 at 2403.834 kb on - strand, within PfGW456L13_2190 at 2403.862 kb on + strand, within PfGW456L13_2190 at 2403.997 kb on - strand, within PfGW456L13_2190 at 2404.038 kb on - strand, within PfGW456L13_2190 at 2404.099 kb on + strand at 2404.100 kb on - strand at 2404.229 kb on + strand at 2404.229 kb on + strand at 2404.229 kb on + strand at 2404.229 kb on + strand at 2404.229 kb on + strand at 2404.262 kb on + strand at 2404.262 kb on + strand at 2404.262 kb on + strand at 2404.262 kb on + strand at 2404.262 kb on + strand at 2404.263 kb on - strand at 2404.356 kb on + strand at 2404.490 kb on + strand, within PfGW456L13_2191 at 2404.490 kb on + strand, within PfGW456L13_2191 at 2404.490 kb on + strand, within PfGW456L13_2191 at 2404.528 kb on + strand, within PfGW456L13_2191 at 2404.528 kb on + strand, within PfGW456L13_2191 at 2404.529 kb on - strand, within PfGW456L13_2191 at 2404.530 kb on + strand, within PfGW456L13_2191 at 2404.530 kb on + strand, within PfGW456L13_2191 at 2404.530 kb on + strand, within PfGW456L13_2191 at 2404.564 kb on - strand, within PfGW456L13_2191 at 2404.575 kb on + strand, within PfGW456L13_2191 at 2404.575 kb on + strand, within PfGW456L13_2191 at 2404.575 kb on + strand, within PfGW456L13_2191 at 2404.655 kb on - strand, within PfGW456L13_2191 at 2404.689 kb on - strand, within PfGW456L13_2191 at 2404.725 kb on + strand, within PfGW456L13_2191 at 2404.725 kb on + strand, within PfGW456L13_2191 at 2404.725 kb on + strand, within PfGW456L13_2191 at 2404.725 kb on + strand, within PfGW456L13_2191 at 2404.725 kb on + strand, within PfGW456L13_2191 at 2404.732 kb on + strand, within PfGW456L13_2191 at 2404.733 kb on - strand, within PfGW456L13_2191 at 2404.738 kb on + strand, within PfGW456L13_2191 at 2404.843 kb on + strand, within PfGW456L13_2191 at 2404.845 kb on + strand, within PfGW456L13_2191 at 2404.845 kb on + strand, within PfGW456L13_2191 at 2404.846 kb on - strand, within PfGW456L13_2191 at 2404.855 kb on + strand, within PfGW456L13_2191 at 2404.855 kb on + strand, within PfGW456L13_2191 at 2404.855 kb on + strand, within PfGW456L13_2191 at 2404.856 kb on - strand, within PfGW456L13_2191 at 2404.895 kb on + strand, within PfGW456L13_2191 at 2404.895 kb on + strand, within PfGW456L13_2191 at 2404.896 kb on - strand, within PfGW456L13_2191 at 2404.897 kb on + strand, within PfGW456L13_2191 at 2404.898 kb on - strand, within PfGW456L13_2191 at 2404.909 kb on + strand, within PfGW456L13_2191 at 2404.910 kb on - strand, within PfGW456L13_2191 at 2405.092 kb on - strand, within PfGW456L13_2191
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.002 mg/ml remove 2,402,295 - +0.8 2,402,299 - +1.0 2,402,312 + +0.1 2,402,312 + +1.1 2,402,402 + +0.8 2,402,403 - -0.4 2,402,426 + +0.5 2,402,427 - -0.1 2,402,533 - -0.4 2,402,539 - +0.8 2,402,555 + -0.1 2,402,587 + +1.1 2,402,587 + +1.1 2,402,587 + -0.2 2,402,588 - +0.9 2,402,588 - +0.5 2,402,588 - -0.6 2,402,588 - +0.8 2,402,748 + +1.8 2,402,748 + -0.8 2,402,749 - +1.4 2,402,749 - +0.8 2,402,766 + -0.2 2,402,767 - -1.0 2,402,799 + +1.9 2,402,799 + -0.6 2,402,913 + +0.8 2,402,914 - +1.9 2,402,914 - +0.1 2,402,966 + +0.3 2,402,967 - -0.5 2,402,969 + +1.2 2,402,969 + -0.1 2,402,969 + -0.1 2,402,969 + -0.8 2,402,969 + -0.3 2,402,987 + +1.4 2,402,990 + -0.0 2,402,990 + +0.7 2,402,990 + -0.2 2,402,991 - -0.6 2,403,066 + -0.2 2,403,136 + +1.1 2,403,209 - +0.8 2,403,334 + PfGW456L13_2190 0.17 -1.7 2,403,407 - PfGW456L13_2190 0.24 +2.8 2,403,409 + PfGW456L13_2190 0.24 -0.6 2,403,409 + PfGW456L13_2190 0.24 -0.2 2,403,410 - PfGW456L13_2190 0.24 -1.5 2,403,410 - PfGW456L13_2190 0.24 -0.8 2,403,410 - PfGW456L13_2190 0.24 +0.1 2,403,426 - PfGW456L13_2190 0.26 +0.2 2,403,444 - PfGW456L13_2190 0.28 -0.5 2,403,514 + PfGW456L13_2190 0.34 -0.5 2,403,834 - PfGW456L13_2190 0.65 -0.8 2,403,862 + PfGW456L13_2190 0.68 -0.2 2,403,997 - PfGW456L13_2190 0.81 +1.7 2,404,038 - PfGW456L13_2190 0.85 -1.2 2,404,099 + +0.4 2,404,100 - +0.4 2,404,229 + +0.0 2,404,229 + +0.1 2,404,229 + -0.6 2,404,229 + +0.8 2,404,229 + -0.5 2,404,262 + -0.0 2,404,262 + +0.7 2,404,262 + +0.3 2,404,262 + -0.8 2,404,262 + +0.8 2,404,263 - +0.8 2,404,356 + +0.7 2,404,490 + PfGW456L13_2191 0.11 -0.2 2,404,490 + PfGW456L13_2191 0.11 -1.0 2,404,490 + PfGW456L13_2191 0.11 +0.3 2,404,528 + PfGW456L13_2191 0.13 -0.8 2,404,528 + PfGW456L13_2191 0.13 -1.8 2,404,529 - PfGW456L13_2191 0.13 +1.4 2,404,530 + PfGW456L13_2191 0.13 -1.3 2,404,530 + PfGW456L13_2191 0.13 +0.7 2,404,530 + PfGW456L13_2191 0.13 +1.4 2,404,564 - PfGW456L13_2191 0.15 +0.2 2,404,575 + PfGW456L13_2191 0.15 +1.1 2,404,575 + PfGW456L13_2191 0.15 +0.2 2,404,575 + PfGW456L13_2191 0.15 +1.2 2,404,655 - PfGW456L13_2191 0.19 +1.2 2,404,689 - PfGW456L13_2191 0.21 +0.2 2,404,725 + PfGW456L13_2191 0.23 +0.1 2,404,725 + PfGW456L13_2191 0.23 +0.9 2,404,725 + PfGW456L13_2191 0.23 -0.3 2,404,725 + PfGW456L13_2191 0.23 +0.2 2,404,725 + PfGW456L13_2191 0.23 +1.1 2,404,732 + PfGW456L13_2191 0.23 +0.2 2,404,733 - PfGW456L13_2191 0.23 +1.8 2,404,738 + PfGW456L13_2191 0.23 -0.0 2,404,843 + PfGW456L13_2191 0.29 +0.2 2,404,845 + PfGW456L13_2191 0.29 +0.8 2,404,845 + PfGW456L13_2191 0.29 +0.3 2,404,846 - PfGW456L13_2191 0.29 +1.2 2,404,855 + PfGW456L13_2191 0.29 +1.8 2,404,855 + PfGW456L13_2191 0.29 -1.5 2,404,855 + PfGW456L13_2191 0.29 +0.1 2,404,856 - PfGW456L13_2191 0.29 -0.5 2,404,895 + PfGW456L13_2191 0.31 -0.1 2,404,895 + PfGW456L13_2191 0.31 -1.8 2,404,896 - PfGW456L13_2191 0.31 +0.2 2,404,897 + PfGW456L13_2191 0.31 +0.6 2,404,898 - PfGW456L13_2191 0.31 +0.8 2,404,909 + PfGW456L13_2191 0.32 -1.0 2,404,910 - PfGW456L13_2191 0.32 +0.3 2,405,092 - PfGW456L13_2191 0.41 -1.0
Or see this region's nucleotide sequence