Experiment: Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_1823 and PfGW456L13_1824 are separated by 98 nucleotides PfGW456L13_1824 and PfGW456L13_1825 are separated by 336 nucleotides
PfGW456L13_1823 - Exodeoxyribonuclease I (EC 3.1.11.1), at 2,009,148 to 2,010,578
_1823
PfGW456L13_1824 - transcriptional regulator MvaT, P16 subunit, at 2,010,677 to 2,011,054
_1824
PfGW456L13_1825 - Formyltetrahydrofolate deformylase (EC 3.5.1.10), at 2,011,391 to 2,012,239
_1825
Position (kb)
2010
2011
2012 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2009.740 kb on - strand, within PfGW456L13_1823 at 2009.788 kb on + strand, within PfGW456L13_1823 at 2009.789 kb on - strand, within PfGW456L13_1823 at 2009.844 kb on + strand, within PfGW456L13_1823 at 2009.844 kb on + strand, within PfGW456L13_1823 at 2009.844 kb on + strand, within PfGW456L13_1823 at 2009.844 kb on + strand, within PfGW456L13_1823 at 2009.844 kb on + strand, within PfGW456L13_1823 at 2009.844 kb on + strand, within PfGW456L13_1823 at 2009.844 kb on + strand, within PfGW456L13_1823 at 2009.844 kb on + strand, within PfGW456L13_1823 at 2009.844 kb on + strand, within PfGW456L13_1823 at 2009.844 kb on + strand, within PfGW456L13_1823 at 2009.844 kb on + strand, within PfGW456L13_1823 at 2009.844 kb on + strand, within PfGW456L13_1823 at 2009.845 kb on - strand, within PfGW456L13_1823 at 2009.845 kb on - strand, within PfGW456L13_1823 at 2009.845 kb on - strand, within PfGW456L13_1823 at 2009.845 kb on - strand, within PfGW456L13_1823 at 2009.845 kb on - strand, within PfGW456L13_1823 at 2009.845 kb on - strand, within PfGW456L13_1823 at 2009.845 kb on - strand, within PfGW456L13_1823 at 2009.845 kb on - strand, within PfGW456L13_1823 at 2009.845 kb on - strand, within PfGW456L13_1823 at 2009.845 kb on - strand, within PfGW456L13_1823 at 2009.845 kb on - strand, within PfGW456L13_1823 at 2009.845 kb on - strand, within PfGW456L13_1823 at 2009.970 kb on + strand, within PfGW456L13_1823 at 2009.970 kb on + strand, within PfGW456L13_1823 at 2009.970 kb on + strand, within PfGW456L13_1823 at 2009.970 kb on + strand, within PfGW456L13_1823 at 2009.970 kb on + strand, within PfGW456L13_1823 at 2009.970 kb on + strand, within PfGW456L13_1823 at 2009.970 kb on + strand, within PfGW456L13_1823 at 2009.970 kb on + strand, within PfGW456L13_1823 at 2009.971 kb on - strand, within PfGW456L13_1823 at 2009.971 kb on - strand, within PfGW456L13_1823 at 2009.971 kb on - strand, within PfGW456L13_1823 at 2009.971 kb on - strand, within PfGW456L13_1823 at 2009.971 kb on - strand, within PfGW456L13_1823 at 2009.971 kb on - strand, within PfGW456L13_1823 at 2009.971 kb on - strand, within PfGW456L13_1823 at 2009.971 kb on - strand, within PfGW456L13_1823 at 2009.972 kb on + strand, within PfGW456L13_1823 at 2010.111 kb on + strand, within PfGW456L13_1823 at 2010.111 kb on + strand, within PfGW456L13_1823 at 2010.111 kb on + strand, within PfGW456L13_1823 at 2010.111 kb on + strand, within PfGW456L13_1823 at 2010.111 kb on + strand, within PfGW456L13_1823 at 2010.112 kb on - strand, within PfGW456L13_1823 at 2010.178 kb on - strand, within PfGW456L13_1823 at 2010.223 kb on + strand, within PfGW456L13_1823 at 2010.223 kb on + strand, within PfGW456L13_1823 at 2010.224 kb on - strand, within PfGW456L13_1823 at 2010.225 kb on + strand, within PfGW456L13_1823 at 2010.225 kb on + strand, within PfGW456L13_1823 at 2010.225 kb on + strand, within PfGW456L13_1823 at 2010.225 kb on + strand, within PfGW456L13_1823 at 2010.225 kb on + strand, within PfGW456L13_1823 at 2010.225 kb on + strand, within PfGW456L13_1823 at 2010.225 kb on + strand, within PfGW456L13_1823 at 2010.226 kb on - strand, within PfGW456L13_1823 at 2010.237 kb on - strand, within PfGW456L13_1823 at 2010.455 kb on + strand at 2010.497 kb on + strand at 2010.503 kb on + strand at 2010.543 kb on + strand at 2010.544 kb on - strand at 2010.611 kb on + strand at 2010.612 kb on - strand at 2010.612 kb on - strand at 2010.799 kb on - strand, within PfGW456L13_1824 at 2011.016 kb on - strand, within PfGW456L13_1824 at 2011.016 kb on - strand, within PfGW456L13_1824 at 2011.062 kb on - strand at 2011.066 kb on + strand at 2011.066 kb on + strand at 2011.067 kb on - strand at 2011.067 kb on - strand at 2011.067 kb on - strand at 2011.067 kb on - strand at 2011.067 kb on - strand at 2011.067 kb on - strand at 2011.104 kb on - strand at 2011.106 kb on + strand at 2011.127 kb on + strand at 2011.128 kb on - strand at 2011.135 kb on + strand at 2011.183 kb on + strand at 2011.192 kb on + strand at 2011.193 kb on - strand at 2011.219 kb on - strand at 2011.219 kb on - strand at 2011.219 kb on - strand at 2011.220 kb on + strand at 2011.221 kb on - strand at 2011.224 kb on + strand at 2011.230 kb on - strand at 2011.326 kb on + strand at 2011.327 kb on - strand at 2011.327 kb on - strand at 2011.327 kb on - strand at 2011.902 kb on - strand, within PfGW456L13_1825 at 2011.938 kb on - strand, within PfGW456L13_1825
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.002 mg/ml remove 2,009,740 - PfGW456L13_1823 0.41 +0.7 2,009,788 + PfGW456L13_1823 0.45 +1.5 2,009,789 - PfGW456L13_1823 0.45 -0.7 2,009,844 + PfGW456L13_1823 0.49 -0.3 2,009,844 + PfGW456L13_1823 0.49 +1.7 2,009,844 + PfGW456L13_1823 0.49 -2.2 2,009,844 + PfGW456L13_1823 0.49 +0.1 2,009,844 + PfGW456L13_1823 0.49 +1.8 2,009,844 + PfGW456L13_1823 0.49 -1.7 2,009,844 + PfGW456L13_1823 0.49 +0.2 2,009,844 + PfGW456L13_1823 0.49 -0.2 2,009,844 + PfGW456L13_1823 0.49 -0.7 2,009,844 + PfGW456L13_1823 0.49 -0.4 2,009,844 + PfGW456L13_1823 0.49 +1.5 2,009,844 + PfGW456L13_1823 0.49 +0.7 2,009,845 - PfGW456L13_1823 0.49 -1.7 2,009,845 - PfGW456L13_1823 0.49 -0.6 2,009,845 - PfGW456L13_1823 0.49 -1.7 2,009,845 - PfGW456L13_1823 0.49 -0.4 2,009,845 - PfGW456L13_1823 0.49 -0.8 2,009,845 - PfGW456L13_1823 0.49 +0.4 2,009,845 - PfGW456L13_1823 0.49 +0.2 2,009,845 - PfGW456L13_1823 0.49 -0.9 2,009,845 - PfGW456L13_1823 0.49 -1.3 2,009,845 - PfGW456L13_1823 0.49 +0.5 2,009,845 - PfGW456L13_1823 0.49 +0.1 2,009,845 - PfGW456L13_1823 0.49 +0.2 2,009,970 + PfGW456L13_1823 0.57 -0.4 2,009,970 + PfGW456L13_1823 0.57 +0.3 2,009,970 + PfGW456L13_1823 0.57 +0.6 2,009,970 + PfGW456L13_1823 0.57 -1.2 2,009,970 + PfGW456L13_1823 0.57 -0.2 2,009,970 + PfGW456L13_1823 0.57 +0.3 2,009,970 + PfGW456L13_1823 0.57 -0.2 2,009,970 + PfGW456L13_1823 0.57 -0.9 2,009,971 - PfGW456L13_1823 0.58 +0.8 2,009,971 - PfGW456L13_1823 0.58 -0.9 2,009,971 - PfGW456L13_1823 0.58 -2.0 2,009,971 - PfGW456L13_1823 0.58 +0.0 2,009,971 - PfGW456L13_1823 0.58 +0.7 2,009,971 - PfGW456L13_1823 0.58 -1.7 2,009,971 - PfGW456L13_1823 0.58 -0.1 2,009,971 - PfGW456L13_1823 0.58 +0.2 2,009,972 + PfGW456L13_1823 0.58 -1.1 2,010,111 + PfGW456L13_1823 0.67 +0.2 2,010,111 + PfGW456L13_1823 0.67 +0.5 2,010,111 + PfGW456L13_1823 0.67 -0.3 2,010,111 + PfGW456L13_1823 0.67 +0.1 2,010,111 + PfGW456L13_1823 0.67 -0.1 2,010,112 - PfGW456L13_1823 0.67 -0.5 2,010,178 - PfGW456L13_1823 0.72 -1.1 2,010,223 + PfGW456L13_1823 0.75 -1.1 2,010,223 + PfGW456L13_1823 0.75 -0.5 2,010,224 - PfGW456L13_1823 0.75 -0.2 2,010,225 + PfGW456L13_1823 0.75 +0.7 2,010,225 + PfGW456L13_1823 0.75 -0.3 2,010,225 + PfGW456L13_1823 0.75 -0.6 2,010,225 + PfGW456L13_1823 0.75 -0.0 2,010,225 + PfGW456L13_1823 0.75 +0.2 2,010,225 + PfGW456L13_1823 0.75 +0.9 2,010,225 + PfGW456L13_1823 0.75 +0.7 2,010,226 - PfGW456L13_1823 0.75 +1.1 2,010,237 - PfGW456L13_1823 0.76 +0.3 2,010,455 + +0.2 2,010,497 + +0.3 2,010,503 + +0.2 2,010,543 + -0.2 2,010,544 - -1.1 2,010,611 + -0.4 2,010,612 - -0.2 2,010,612 - +0.9 2,010,799 - PfGW456L13_1824 0.32 -1.4 2,011,016 - PfGW456L13_1824 0.90 -1.6 2,011,016 - PfGW456L13_1824 0.90 -1.1 2,011,062 - -0.8 2,011,066 + -1.4 2,011,066 + -1.7 2,011,067 - +0.4 2,011,067 - +0.9 2,011,067 - +0.3 2,011,067 - +0.3 2,011,067 - -1.1 2,011,067 - +0.6 2,011,104 - -0.1 2,011,106 + -0.7 2,011,127 + +0.6 2,011,128 - -2.2 2,011,135 + -0.5 2,011,183 + +0.5 2,011,192 + -0.4 2,011,193 - +0.8 2,011,219 - +0.5 2,011,219 - +0.6 2,011,219 - -0.4 2,011,220 + -2.1 2,011,221 - +3.2 2,011,224 + +0.5 2,011,230 - +0.9 2,011,326 + -0.3 2,011,327 - -2.1 2,011,327 - -0.5 2,011,327 - +0.1 2,011,902 - PfGW456L13_1825 0.60 -0.2 2,011,938 - PfGW456L13_1825 0.64 -0.7
Or see this region's nucleotide sequence