Experiment: Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_1514 and PfGW456L13_1515 are separated by 45 nucleotides PfGW456L13_1515 and PfGW456L13_1516 overlap by 29 nucleotides PfGW456L13_1516 and PfGW456L13_1517 are separated by 130 nucleotides
PfGW456L13_1514 - Methyltransferase (EC 2.1.1.-), at 1,664,632 to 1,665,648
_1514
PfGW456L13_1515 - hypothetical protein, at 1,665,694 to 1,665,870
_1515
PfGW456L13_1516 - FIG00953497: hypothetical protein, at 1,665,842 to 1,666,714
_1516
PfGW456L13_1517 - Acetyl-coenzyme A synthetase (EC 6.2.1.1), at 1,666,845 to 1,668,782
_1517
Position (kb)
1665
1666 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1664.954 kb on + strand, within PfGW456L13_1514 at 1664.955 kb on - strand, within PfGW456L13_1514 at 1664.955 kb on - strand, within PfGW456L13_1514 at 1664.955 kb on - strand, within PfGW456L13_1514 at 1665.023 kb on + strand, within PfGW456L13_1514 at 1665.024 kb on - strand, within PfGW456L13_1514 at 1665.024 kb on - strand, within PfGW456L13_1514 at 1665.024 kb on - strand, within PfGW456L13_1514 at 1665.024 kb on - strand, within PfGW456L13_1514 at 1665.170 kb on + strand, within PfGW456L13_1514 at 1665.170 kb on + strand, within PfGW456L13_1514 at 1665.170 kb on + strand, within PfGW456L13_1514 at 1665.171 kb on - strand at 1665.171 kb on - strand, within PfGW456L13_1514 at 1665.287 kb on + strand, within PfGW456L13_1514 at 1665.287 kb on + strand, within PfGW456L13_1514 at 1665.288 kb on - strand, within PfGW456L13_1514 at 1665.395 kb on + strand, within PfGW456L13_1514 at 1665.396 kb on - strand, within PfGW456L13_1514 at 1665.561 kb on - strand at 1665.687 kb on + strand at 1665.687 kb on + strand at 1665.688 kb on - strand at 1665.688 kb on - strand at 1665.836 kb on + strand, within PfGW456L13_1515 at 1665.836 kb on + strand, within PfGW456L13_1515 at 1665.836 kb on + strand, within PfGW456L13_1515 at 1665.836 kb on + strand, within PfGW456L13_1515 at 1665.837 kb on - strand, within PfGW456L13_1515 at 1665.837 kb on - strand, within PfGW456L13_1515 at 1665.837 kb on - strand, within PfGW456L13_1515 at 1665.837 kb on - strand, within PfGW456L13_1515 at 1665.837 kb on - strand, within PfGW456L13_1515 at 1665.843 kb on + strand at 1665.843 kb on + strand at 1665.844 kb on - strand at 1665.844 kb on - strand at 1666.126 kb on + strand, within PfGW456L13_1516 at 1666.126 kb on + strand, within PfGW456L13_1516 at 1666.126 kb on + strand, within PfGW456L13_1516 at 1666.126 kb on + strand, within PfGW456L13_1516 at 1666.126 kb on + strand, within PfGW456L13_1516 at 1666.127 kb on - strand, within PfGW456L13_1516 at 1666.127 kb on - strand, within PfGW456L13_1516 at 1666.137 kb on + strand, within PfGW456L13_1516 at 1666.137 kb on + strand, within PfGW456L13_1516 at 1666.137 kb on + strand, within PfGW456L13_1516 at 1666.137 kb on + strand, within PfGW456L13_1516 at 1666.137 kb on + strand, within PfGW456L13_1516 at 1666.137 kb on + strand, within PfGW456L13_1516 at 1666.138 kb on - strand, within PfGW456L13_1516 at 1666.215 kb on + strand, within PfGW456L13_1516 at 1666.215 kb on + strand, within PfGW456L13_1516 at 1666.216 kb on - strand, within PfGW456L13_1516 at 1666.216 kb on - strand, within PfGW456L13_1516 at 1666.332 kb on + strand, within PfGW456L13_1516 at 1666.354 kb on + strand, within PfGW456L13_1516 at 1666.725 kb on + strand at 1666.789 kb on + strand at 1666.789 kb on + strand at 1666.863 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.002 mg/ml remove 1,664,954 + PfGW456L13_1514 0.32 +0.9 1,664,955 - PfGW456L13_1514 0.32 -0.6 1,664,955 - PfGW456L13_1514 0.32 +0.6 1,664,955 - PfGW456L13_1514 0.32 -0.3 1,665,023 + PfGW456L13_1514 0.38 -0.2 1,665,024 - PfGW456L13_1514 0.39 -0.0 1,665,024 - PfGW456L13_1514 0.39 +0.1 1,665,024 - PfGW456L13_1514 0.39 +0.3 1,665,024 - PfGW456L13_1514 0.39 -0.2 1,665,170 + PfGW456L13_1514 0.53 -0.4 1,665,170 + PfGW456L13_1514 0.53 +0.3 1,665,170 + PfGW456L13_1514 0.53 -0.5 1,665,171 - +1.5 1,665,171 - PfGW456L13_1514 0.53 +0.7 1,665,287 + PfGW456L13_1514 0.64 +0.3 1,665,287 + PfGW456L13_1514 0.64 -0.9 1,665,288 - PfGW456L13_1514 0.65 -0.2 1,665,395 + PfGW456L13_1514 0.75 -0.1 1,665,396 - PfGW456L13_1514 0.75 -1.7 1,665,561 - +1.1 1,665,687 + +0.5 1,665,687 + +0.2 1,665,688 - +1.5 1,665,688 - -0.1 1,665,836 + PfGW456L13_1515 0.80 -0.9 1,665,836 + PfGW456L13_1515 0.80 -0.2 1,665,836 + PfGW456L13_1515 0.80 -2.2 1,665,836 + PfGW456L13_1515 0.80 -0.6 1,665,837 - PfGW456L13_1515 0.81 -0.6 1,665,837 - PfGW456L13_1515 0.81 -0.3 1,665,837 - PfGW456L13_1515 0.81 -0.2 1,665,837 - PfGW456L13_1515 0.81 -0.5 1,665,837 - PfGW456L13_1515 0.81 +0.2 1,665,843 + -0.2 1,665,843 + -0.1 1,665,844 - +0.8 1,665,844 - +0.1 1,666,126 + PfGW456L13_1516 0.33 -0.8 1,666,126 + PfGW456L13_1516 0.33 -0.8 1,666,126 + PfGW456L13_1516 0.33 +0.1 1,666,126 + PfGW456L13_1516 0.33 +0.3 1,666,126 + PfGW456L13_1516 0.33 +0.7 1,666,127 - PfGW456L13_1516 0.33 -1.5 1,666,127 - PfGW456L13_1516 0.33 +0.3 1,666,137 + PfGW456L13_1516 0.34 +0.4 1,666,137 + PfGW456L13_1516 0.34 +1.7 1,666,137 + PfGW456L13_1516 0.34 -0.3 1,666,137 + PfGW456L13_1516 0.34 +0.3 1,666,137 + PfGW456L13_1516 0.34 -0.2 1,666,137 + PfGW456L13_1516 0.34 -0.7 1,666,138 - PfGW456L13_1516 0.34 +1.9 1,666,215 + PfGW456L13_1516 0.43 +0.7 1,666,215 + PfGW456L13_1516 0.43 +2.1 1,666,216 - PfGW456L13_1516 0.43 +0.4 1,666,216 - PfGW456L13_1516 0.43 -0.9 1,666,332 + PfGW456L13_1516 0.56 +0.7 1,666,354 + PfGW456L13_1516 0.59 -0.4 1,666,725 + -0.6 1,666,789 + -0.2 1,666,789 + +0.1 1,666,863 - -0.1
Or see this region's nucleotide sequence