Experiment: Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_1335 and PfGW456L13_1336 are separated by 113 nucleotides PfGW456L13_1336 and PfGW456L13_1337 are separated by 4 nucleotides PfGW456L13_1337 and PfGW456L13_1338 are separated by 270 nucleotides PfGW456L13_1338 and PfGW456L13_1339 are separated by 114 nucleotides
PfGW456L13_1335 - Inorganic pyrophosphatase (EC 3.6.1.1), at 1,478,848 to 1,479,375
_1335
PfGW456L13_1336 - Inner membrane protein, at 1,479,489 to 1,480,301
_1336
PfGW456L13_1337 - DedA protein, at 1,480,306 to 1,480,962
_1337
PfGW456L13_1338 - Histone acetyltransferase HPA2 and related acetyltransferases, at 1,481,233 to 1,481,694
_1338
PfGW456L13_1339 - Ethanolamine ammonia-lyase light chain (EC 4.3.1.7), at 1,481,809 to 1,482,633
_1339
Position (kb)
1480
1481 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1479.393 kb on - strand at 1479.443 kb on - strand at 1479.443 kb on - strand at 1479.449 kb on - strand at 1479.449 kb on - strand at 1479.449 kb on - strand at 1479.449 kb on - strand at 1479.449 kb on - strand at 1479.449 kb on - strand at 1479.449 kb on - strand at 1479.449 kb on - strand at 1479.449 kb on - strand at 1479.449 kb on - strand at 1479.449 kb on - strand at 1479.449 kb on - strand at 1479.449 kb on - strand at 1479.449 kb on - strand at 1479.449 kb on - strand at 1479.481 kb on + strand at 1479.482 kb on - strand at 1479.482 kb on - strand at 1479.505 kb on + strand at 1479.505 kb on + strand at 1479.580 kb on + strand, within PfGW456L13_1336 at 1479.580 kb on + strand, within PfGW456L13_1336 at 1479.580 kb on + strand, within PfGW456L13_1336 at 1479.581 kb on - strand, within PfGW456L13_1336 at 1479.581 kb on - strand, within PfGW456L13_1336 at 1479.581 kb on - strand, within PfGW456L13_1336 at 1479.581 kb on - strand, within PfGW456L13_1336 at 1479.592 kb on + strand, within PfGW456L13_1336 at 1479.593 kb on - strand, within PfGW456L13_1336 at 1479.628 kb on + strand, within PfGW456L13_1336 at 1479.628 kb on + strand, within PfGW456L13_1336 at 1479.628 kb on + strand, within PfGW456L13_1336 at 1479.628 kb on + strand, within PfGW456L13_1336 at 1479.628 kb on + strand, within PfGW456L13_1336 at 1479.629 kb on - strand, within PfGW456L13_1336 at 1479.629 kb on - strand, within PfGW456L13_1336 at 1479.673 kb on + strand, within PfGW456L13_1336 at 1479.674 kb on - strand, within PfGW456L13_1336 at 1479.733 kb on + strand, within PfGW456L13_1336 at 1479.733 kb on + strand, within PfGW456L13_1336 at 1479.733 kb on + strand, within PfGW456L13_1336 at 1479.733 kb on + strand, within PfGW456L13_1336 at 1479.734 kb on - strand, within PfGW456L13_1336 at 1479.734 kb on - strand, within PfGW456L13_1336 at 1479.856 kb on + strand, within PfGW456L13_1336 at 1479.856 kb on + strand, within PfGW456L13_1336 at 1479.857 kb on - strand, within PfGW456L13_1336 at 1479.857 kb on - strand, within PfGW456L13_1336 at 1479.857 kb on - strand, within PfGW456L13_1336 at 1479.857 kb on - strand, within PfGW456L13_1336 at 1480.034 kb on - strand, within PfGW456L13_1336 at 1480.155 kb on + strand, within PfGW456L13_1336 at 1480.155 kb on + strand, within PfGW456L13_1336 at 1480.155 kb on + strand, within PfGW456L13_1336 at 1480.156 kb on - strand, within PfGW456L13_1336 at 1480.156 kb on - strand, within PfGW456L13_1336 at 1480.347 kb on + strand at 1480.405 kb on + strand, within PfGW456L13_1337 at 1480.405 kb on + strand, within PfGW456L13_1337 at 1480.449 kb on - strand, within PfGW456L13_1337 at 1480.477 kb on + strand, within PfGW456L13_1337 at 1480.477 kb on + strand, within PfGW456L13_1337 at 1480.518 kb on - strand, within PfGW456L13_1337 at 1480.613 kb on + strand, within PfGW456L13_1337 at 1480.637 kb on + strand, within PfGW456L13_1337 at 1480.637 kb on + strand, within PfGW456L13_1337 at 1480.638 kb on - strand, within PfGW456L13_1337 at 1480.706 kb on + strand, within PfGW456L13_1337 at 1480.706 kb on + strand, within PfGW456L13_1337 at 1480.706 kb on + strand, within PfGW456L13_1337 at 1480.706 kb on + strand, within PfGW456L13_1337 at 1480.706 kb on + strand, within PfGW456L13_1337 at 1480.706 kb on + strand, within PfGW456L13_1337 at 1480.706 kb on + strand, within PfGW456L13_1337 at 1480.706 kb on + strand, within PfGW456L13_1337 at 1480.707 kb on - strand, within PfGW456L13_1337 at 1480.707 kb on - strand, within PfGW456L13_1337 at 1480.707 kb on - strand, within PfGW456L13_1337 at 1480.707 kb on - strand, within PfGW456L13_1337 at 1480.707 kb on - strand, within PfGW456L13_1337 at 1480.707 kb on - strand, within PfGW456L13_1337 at 1480.707 kb on - strand, within PfGW456L13_1337 at 1480.707 kb on - strand, within PfGW456L13_1337 at 1480.707 kb on - strand, within PfGW456L13_1337 at 1480.880 kb on + strand, within PfGW456L13_1337 at 1480.880 kb on + strand, within PfGW456L13_1337 at 1480.881 kb on - strand, within PfGW456L13_1337 at 1480.881 kb on - strand, within PfGW456L13_1337 at 1480.895 kb on + strand, within PfGW456L13_1337 at 1480.896 kb on - strand, within PfGW456L13_1337 at 1480.896 kb on - strand, within PfGW456L13_1337 at 1480.903 kb on + strand at 1480.904 kb on - strand at 1480.904 kb on - strand at 1480.904 kb on - strand at 1481.024 kb on + strand at 1481.024 kb on + strand at 1481.036 kb on + strand at 1481.036 kb on + strand at 1481.037 kb on - strand at 1481.046 kb on + strand at 1481.047 kb on - strand at 1481.047 kb on - strand at 1481.047 kb on - strand at 1481.068 kb on + strand at 1481.068 kb on + strand at 1481.068 kb on + strand at 1481.069 kb on - strand at 1481.069 kb on - strand at 1481.070 kb on + strand at 1481.070 kb on + strand at 1481.070 kb on + strand at 1481.070 kb on + strand at 1481.070 kb on + strand at 1481.071 kb on - strand at 1481.071 kb on - strand at 1481.071 kb on - strand at 1481.071 kb on - strand at 1481.176 kb on + strand at 1481.176 kb on + strand at 1481.176 kb on + strand at 1481.176 kb on + strand at 1481.177 kb on - strand at 1481.194 kb on + strand at 1481.194 kb on + strand at 1481.194 kb on + strand at 1481.194 kb on + strand at 1481.194 kb on + strand at 1481.194 kb on + strand at 1481.195 kb on - strand at 1481.195 kb on - strand at 1481.261 kb on + strand at 1481.261 kb on + strand at 1481.261 kb on + strand at 1481.261 kb on + strand at 1481.261 kb on + strand at 1481.261 kb on + strand at 1481.262 kb on - strand at 1481.262 kb on - strand at 1481.262 kb on - strand at 1481.262 kb on - strand at 1481.262 kb on - strand at 1481.262 kb on - strand at 1481.303 kb on + strand, within PfGW456L13_1338 at 1481.303 kb on + strand, within PfGW456L13_1338 at 1481.303 kb on + strand, within PfGW456L13_1338 at 1481.304 kb on - strand, within PfGW456L13_1338 at 1481.438 kb on + strand, within PfGW456L13_1338 at 1481.438 kb on + strand, within PfGW456L13_1338 at 1481.438 kb on + strand, within PfGW456L13_1338 at 1481.438 kb on + strand, within PfGW456L13_1338 at 1481.438 kb on + strand, within PfGW456L13_1338 at 1481.438 kb on + strand, within PfGW456L13_1338 at 1481.438 kb on + strand, within PfGW456L13_1338 at 1481.438 kb on + strand, within PfGW456L13_1338 at 1481.438 kb on + strand, within PfGW456L13_1338 at 1481.438 kb on + strand, within PfGW456L13_1338 at 1481.439 kb on - strand, within PfGW456L13_1338 at 1481.439 kb on - strand, within PfGW456L13_1338 at 1481.442 kb on + strand, within PfGW456L13_1338 at 1481.442 kb on + strand, within PfGW456L13_1338 at 1481.442 kb on + strand, within PfGW456L13_1338 at 1481.443 kb on - strand, within PfGW456L13_1338 at 1481.443 kb on - strand, within PfGW456L13_1338 at 1481.443 kb on - strand, within PfGW456L13_1338 at 1481.443 kb on - strand, within PfGW456L13_1338 at 1481.443 kb on - strand, within PfGW456L13_1338 at 1481.443 kb on - strand, within PfGW456L13_1338 at 1481.443 kb on - strand, within PfGW456L13_1338 at 1481.443 kb on - strand, within PfGW456L13_1338 at 1481.443 kb on - strand, within PfGW456L13_1338 at 1481.493 kb on - strand, within PfGW456L13_1338 at 1481.546 kb on + strand, within PfGW456L13_1338 at 1481.546 kb on + strand, within PfGW456L13_1338 at 1481.546 kb on + strand, within PfGW456L13_1338 at 1481.547 kb on - strand, within PfGW456L13_1338 at 1481.547 kb on - strand, within PfGW456L13_1338 at 1481.547 kb on - strand, within PfGW456L13_1338 at 1481.547 kb on - strand, within PfGW456L13_1338 at 1481.547 kb on - strand, within PfGW456L13_1338 at 1481.621 kb on + strand, within PfGW456L13_1338 at 1481.621 kb on + strand, within PfGW456L13_1338 at 1481.621 kb on + strand, within PfGW456L13_1338 at 1481.622 kb on - strand, within PfGW456L13_1338 at 1481.697 kb on + strand at 1481.697 kb on + strand at 1481.697 kb on + strand at 1481.697 kb on + strand at 1481.698 kb on - strand at 1481.698 kb on - strand at 1481.698 kb on - strand at 1481.698 kb on - strand at 1481.698 kb on - strand at 1481.723 kb on + strand at 1481.723 kb on + strand at 1481.723 kb on + strand at 1481.723 kb on + strand at 1481.723 kb on + strand at 1481.723 kb on + strand at 1481.723 kb on + strand at 1481.723 kb on + strand at 1481.723 kb on + strand at 1481.723 kb on + strand at 1481.723 kb on + strand at 1481.723 kb on + strand at 1481.723 kb on + strand at 1481.723 kb on + strand at 1481.723 kb on + strand at 1481.723 kb on + strand at 1481.723 kb on + strand at 1481.724 kb on - strand at 1481.724 kb on - strand at 1481.724 kb on - strand at 1481.724 kb on - strand at 1481.724 kb on - strand at 1481.724 kb on - strand at 1481.724 kb on - strand at 1481.724 kb on - strand at 1481.724 kb on - strand at 1481.784 kb on + strand at 1481.942 kb on + strand, within PfGW456L13_1339 at 1481.942 kb on + strand, within PfGW456L13_1339 at 1481.943 kb on - strand, within PfGW456L13_1339 at 1481.943 kb on - strand, within PfGW456L13_1339
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.002 mg/ml remove 1,479,393 - +0.2 1,479,443 - -0.2 1,479,443 - -0.1 1,479,449 - -0.5 1,479,449 - +0.5 1,479,449 - -1.0 1,479,449 - -1.0 1,479,449 - +0.4 1,479,449 - +0.7 1,479,449 - -0.3 1,479,449 - +0.5 1,479,449 - +0.9 1,479,449 - +0.7 1,479,449 - +0.2 1,479,449 - +0.7 1,479,449 - +0.1 1,479,449 - +1.1 1,479,449 - -0.5 1,479,481 + +0.8 1,479,482 - -1.4 1,479,482 - -0.0 1,479,505 + +0.7 1,479,505 + -0.2 1,479,580 + PfGW456L13_1336 0.11 +0.7 1,479,580 + PfGW456L13_1336 0.11 -0.6 1,479,580 + PfGW456L13_1336 0.11 +0.2 1,479,581 - PfGW456L13_1336 0.11 +0.2 1,479,581 - PfGW456L13_1336 0.11 +0.2 1,479,581 - PfGW456L13_1336 0.11 +0.5 1,479,581 - PfGW456L13_1336 0.11 +0.9 1,479,592 + PfGW456L13_1336 0.13 +0.6 1,479,593 - PfGW456L13_1336 0.13 +0.1 1,479,628 + PfGW456L13_1336 0.17 +1.1 1,479,628 + PfGW456L13_1336 0.17 +0.1 1,479,628 + PfGW456L13_1336 0.17 +1.3 1,479,628 + PfGW456L13_1336 0.17 -1.3 1,479,628 + PfGW456L13_1336 0.17 -0.9 1,479,629 - PfGW456L13_1336 0.17 +0.1 1,479,629 - PfGW456L13_1336 0.17 -0.8 1,479,673 + PfGW456L13_1336 0.23 -0.6 1,479,674 - PfGW456L13_1336 0.23 +0.3 1,479,733 + PfGW456L13_1336 0.30 -2.3 1,479,733 + PfGW456L13_1336 0.30 -0.3 1,479,733 + PfGW456L13_1336 0.30 +0.4 1,479,733 + PfGW456L13_1336 0.30 -0.4 1,479,734 - PfGW456L13_1336 0.30 +0.5 1,479,734 - PfGW456L13_1336 0.30 -0.1 1,479,856 + PfGW456L13_1336 0.45 +0.0 1,479,856 + PfGW456L13_1336 0.45 -0.2 1,479,857 - PfGW456L13_1336 0.45 +0.3 1,479,857 - PfGW456L13_1336 0.45 +0.1 1,479,857 - PfGW456L13_1336 0.45 -1.9 1,479,857 - PfGW456L13_1336 0.45 -0.0 1,480,034 - PfGW456L13_1336 0.67 -0.5 1,480,155 + PfGW456L13_1336 0.82 +0.2 1,480,155 + PfGW456L13_1336 0.82 -0.6 1,480,155 + PfGW456L13_1336 0.82 -0.7 1,480,156 - PfGW456L13_1336 0.82 -0.1 1,480,156 - PfGW456L13_1336 0.82 -0.2 1,480,347 + -0.0 1,480,405 + PfGW456L13_1337 0.15 +1.8 1,480,405 + PfGW456L13_1337 0.15 -0.3 1,480,449 - PfGW456L13_1337 0.22 -1.3 1,480,477 + PfGW456L13_1337 0.26 -0.2 1,480,477 + PfGW456L13_1337 0.26 -0.2 1,480,518 - PfGW456L13_1337 0.32 -0.3 1,480,613 + PfGW456L13_1337 0.47 -0.3 1,480,637 + PfGW456L13_1337 0.50 -0.9 1,480,637 + PfGW456L13_1337 0.50 -0.4 1,480,638 - PfGW456L13_1337 0.51 -1.5 1,480,706 + PfGW456L13_1337 0.61 -0.7 1,480,706 + PfGW456L13_1337 0.61 -0.3 1,480,706 + PfGW456L13_1337 0.61 -1.3 1,480,706 + PfGW456L13_1337 0.61 +0.1 1,480,706 + PfGW456L13_1337 0.61 -1.7 1,480,706 + PfGW456L13_1337 0.61 -0.7 1,480,706 + PfGW456L13_1337 0.61 -0.7 1,480,706 + PfGW456L13_1337 0.61 +0.5 1,480,707 - PfGW456L13_1337 0.61 -1.3 1,480,707 - PfGW456L13_1337 0.61 -0.6 1,480,707 - PfGW456L13_1337 0.61 +0.5 1,480,707 - PfGW456L13_1337 0.61 +0.7 1,480,707 - PfGW456L13_1337 0.61 -0.9 1,480,707 - PfGW456L13_1337 0.61 -1.0 1,480,707 - PfGW456L13_1337 0.61 -2.1 1,480,707 - PfGW456L13_1337 0.61 +1.1 1,480,707 - PfGW456L13_1337 0.61 +0.4 1,480,880 + PfGW456L13_1337 0.87 +0.1 1,480,880 + PfGW456L13_1337 0.87 -0.7 1,480,881 - PfGW456L13_1337 0.88 -0.5 1,480,881 - PfGW456L13_1337 0.88 +0.5 1,480,895 + PfGW456L13_1337 0.90 -1.3 1,480,896 - PfGW456L13_1337 0.90 -1.0 1,480,896 - PfGW456L13_1337 0.90 -0.3 1,480,903 + +0.6 1,480,904 - +1.0 1,480,904 - -0.4 1,480,904 - +1.8 1,481,024 + +0.1 1,481,024 + -0.2 1,481,036 + +0.2 1,481,036 + +2.0 1,481,037 - +0.8 1,481,046 + +1.0 1,481,047 - +0.5 1,481,047 - -2.0 1,481,047 - -0.2 1,481,068 + +0.8 1,481,068 + +0.5 1,481,068 + +0.5 1,481,069 - +0.6 1,481,069 - -0.3 1,481,070 + +2.1 1,481,070 + -1.2 1,481,070 + +0.8 1,481,070 + +0.4 1,481,070 + +0.5 1,481,071 - -0.9 1,481,071 - -0.7 1,481,071 - -0.3 1,481,071 - +0.8 1,481,176 + -0.5 1,481,176 + -0.0 1,481,176 + +0.5 1,481,176 + +0.1 1,481,177 - -0.2 1,481,194 + +0.2 1,481,194 + +0.5 1,481,194 + -0.5 1,481,194 + -0.9 1,481,194 + +0.3 1,481,194 + -0.3 1,481,195 - +0.9 1,481,195 - -0.7 1,481,261 + +0.2 1,481,261 + +0.3 1,481,261 + +0.4 1,481,261 + +0.4 1,481,261 + +0.1 1,481,261 + +1.0 1,481,262 - -0.4 1,481,262 - +0.6 1,481,262 - +0.8 1,481,262 - -0.4 1,481,262 - -0.0 1,481,262 - -0.1 1,481,303 + PfGW456L13_1338 0.15 -0.1 1,481,303 + PfGW456L13_1338 0.15 -2.0 1,481,303 + PfGW456L13_1338 0.15 -0.4 1,481,304 - PfGW456L13_1338 0.15 +0.8 1,481,438 + PfGW456L13_1338 0.44 -1.5 1,481,438 + PfGW456L13_1338 0.44 +0.8 1,481,438 + PfGW456L13_1338 0.44 -0.7 1,481,438 + PfGW456L13_1338 0.44 -0.0 1,481,438 + PfGW456L13_1338 0.44 -0.1 1,481,438 + PfGW456L13_1338 0.44 -0.1 1,481,438 + PfGW456L13_1338 0.44 -0.2 1,481,438 + PfGW456L13_1338 0.44 +0.5 1,481,438 + PfGW456L13_1338 0.44 +0.1 1,481,438 + PfGW456L13_1338 0.44 -1.0 1,481,439 - PfGW456L13_1338 0.45 +0.1 1,481,439 - PfGW456L13_1338 0.45 +0.6 1,481,442 + PfGW456L13_1338 0.45 +0.1 1,481,442 + PfGW456L13_1338 0.45 +0.7 1,481,442 + PfGW456L13_1338 0.45 +0.7 1,481,443 - PfGW456L13_1338 0.45 +0.6 1,481,443 - PfGW456L13_1338 0.45 -0.0 1,481,443 - PfGW456L13_1338 0.45 +0.0 1,481,443 - PfGW456L13_1338 0.45 -1.0 1,481,443 - PfGW456L13_1338 0.45 +0.2 1,481,443 - PfGW456L13_1338 0.45 -0.2 1,481,443 - PfGW456L13_1338 0.45 -0.1 1,481,443 - PfGW456L13_1338 0.45 -0.6 1,481,443 - PfGW456L13_1338 0.45 +0.3 1,481,493 - PfGW456L13_1338 0.56 -0.5 1,481,546 + PfGW456L13_1338 0.68 +0.5 1,481,546 + PfGW456L13_1338 0.68 -0.0 1,481,546 + PfGW456L13_1338 0.68 +0.4 1,481,547 - PfGW456L13_1338 0.68 +1.1 1,481,547 - PfGW456L13_1338 0.68 +0.3 1,481,547 - PfGW456L13_1338 0.68 -0.2 1,481,547 - PfGW456L13_1338 0.68 +0.1 1,481,547 - PfGW456L13_1338 0.68 -0.2 1,481,621 + PfGW456L13_1338 0.84 -0.5 1,481,621 + PfGW456L13_1338 0.84 +0.4 1,481,621 + PfGW456L13_1338 0.84 -0.4 1,481,622 - PfGW456L13_1338 0.84 +0.4 1,481,697 + -0.7 1,481,697 + -0.9 1,481,697 + +0.3 1,481,697 + -0.4 1,481,698 - +0.3 1,481,698 - +1.6 1,481,698 - -0.7 1,481,698 - +0.0 1,481,698 - +0.1 1,481,723 + +1.1 1,481,723 + +0.8 1,481,723 + +0.5 1,481,723 + +0.0 1,481,723 + -0.5 1,481,723 + +0.6 1,481,723 + -0.2 1,481,723 + +1.1 1,481,723 + +0.3 1,481,723 + -0.6 1,481,723 + +1.3 1,481,723 + -0.3 1,481,723 + +0.4 1,481,723 + +0.7 1,481,723 + -2.2 1,481,723 + -0.5 1,481,723 + +0.2 1,481,724 - -0.1 1,481,724 - +0.0 1,481,724 - -0.7 1,481,724 - -0.7 1,481,724 - -0.7 1,481,724 - +0.5 1,481,724 - -0.5 1,481,724 - -0.1 1,481,724 - -0.1 1,481,784 + -2.3 1,481,942 + PfGW456L13_1339 0.16 -0.5 1,481,942 + PfGW456L13_1339 0.16 +0.0 1,481,943 - PfGW456L13_1339 0.16 +0.4 1,481,943 - PfGW456L13_1339 0.16 -1.0
Or see this region's nucleotide sequence