Experiment: Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_1311 and PfGW456L13_1312 are separated by 127 nucleotides PfGW456L13_1312 and PfGW456L13_1313 overlap by 4 nucleotides PfGW456L13_1313 and PfGW456L13_1314 are separated by 47 nucleotides PfGW456L13_1314 and PfGW456L13_1315 are separated by 16 nucleotides
PfGW456L13_1311 - Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1), at 1,452,307 to 1,452,771
_1311
PfGW456L13_1312 - Ribonucleotide reductase transcriptional regulator NrdR, at 1,452,899 to 1,453,363
_1312
PfGW456L13_1313 - Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193), at 1,453,360 to 1,454,493
_1313
PfGW456L13_1314 - Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9), at 1,454,541 to 1,455,206
_1314
PfGW456L13_1315 - 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25), at 1,455,223 to 1,456,314
_1315
Position (kb)
1453
1454
1455 Strain fitness (log2 ratio)
-1
0
1 at 1452.360 kb on + strand, within PfGW456L13_1311 at 1452.534 kb on + strand, within PfGW456L13_1311 at 1452.763 kb on + strand at 1452.764 kb on - strand at 1452.783 kb on + strand at 1452.822 kb on + strand at 1452.822 kb on + strand at 1452.822 kb on + strand at 1452.822 kb on + strand at 1452.823 kb on - strand at 1452.823 kb on - strand at 1452.836 kb on + strand at 1452.837 kb on - strand at 1452.837 kb on - strand at 1452.864 kb on + strand at 1453.268 kb on + strand, within PfGW456L13_1312 at 1453.268 kb on + strand, within PfGW456L13_1312 at 1453.268 kb on + strand, within PfGW456L13_1312 at 1453.268 kb on + strand, within PfGW456L13_1312 at 1453.268 kb on + strand, within PfGW456L13_1312 at 1453.289 kb on + strand, within PfGW456L13_1312 at 1454.490 kb on - strand at 1454.491 kb on + strand at 1454.508 kb on + strand at 1454.508 kb on + strand at 1454.508 kb on + strand at 1455.234 kb on + strand at 1455.235 kb on - strand at 1455.235 kb on - strand at 1455.235 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.002 mg/ml remove 1,452,360 + PfGW456L13_1311 0.11 -0.5 1,452,534 + PfGW456L13_1311 0.49 +0.7 1,452,763 + -0.0 1,452,764 - +0.0 1,452,783 + +0.5 1,452,822 + -0.3 1,452,822 + -0.3 1,452,822 + +0.0 1,452,822 + -0.0 1,452,823 - -0.4 1,452,823 - -0.1 1,452,836 + -0.7 1,452,837 - +0.1 1,452,837 - +0.3 1,452,864 + +0.5 1,453,268 + PfGW456L13_1312 0.79 -0.4 1,453,268 + PfGW456L13_1312 0.79 -0.3 1,453,268 + PfGW456L13_1312 0.79 -0.6 1,453,268 + PfGW456L13_1312 0.79 -0.3 1,453,268 + PfGW456L13_1312 0.79 -1.6 1,453,289 + PfGW456L13_1312 0.84 -1.1 1,454,490 - -0.5 1,454,491 + -0.0 1,454,508 + +0.3 1,454,508 + +1.0 1,454,508 + +0.3 1,455,234 + +0.0 1,455,235 - +0.7 1,455,235 - -0.9 1,455,235 - -1.2
Or see this region's nucleotide sequence