Experiment: Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_5173 and PfGW456L13_5174 are separated by 155 nucleotides PfGW456L13_5174 and PfGW456L13_1238 are separated by 135 nucleotides PfGW456L13_1238 and PfGW456L13_1239 are separated by 307 nucleotides PfGW456L13_1239 and PfGW456L13_1240 are separated by 7 nucleotides
PfGW456L13_5173 - Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA, at 1,382,026 to 1,384,918
_5173
PfGW456L13_5174 - 5S RNA, at 1,385,074 to 1,385,193
_5174
PfGW456L13_1238 - Biotin operon repressor / Biotin-protein ligase (EC 6.3.4.15), at 1,385,329 to 1,386,288
_1238
PfGW456L13_1239 - Pantothenate kinase type III, CoaX-like (EC 2.7.1.33), at 1,386,596 to 1,387,027
_1239
PfGW456L13_1240 - FIG00956941: hypothetical protein, at 1,387,035 to 1,387,475
_1240
Position (kb)
1385
1386
1387 Strain fitness (log2 ratio)
-1
0
1
2 at 1385.225 kb on + strand at 1385.272 kb on + strand at 1385.272 kb on + strand at 1385.272 kb on + strand at 1385.296 kb on - strand at 1385.342 kb on + strand at 1385.352 kb on + strand at 1385.352 kb on + strand at 1385.352 kb on + strand at 1385.384 kb on + strand at 1385.384 kb on + strand at 1385.384 kb on + strand at 1385.409 kb on + strand at 1385.460 kb on + strand, within PfGW456L13_1238 at 1385.466 kb on + strand, within PfGW456L13_1238 at 1385.528 kb on + strand, within PfGW456L13_1238 at 1387.034 kb on + strand at 1387.034 kb on + strand at 1387.034 kb on + strand at 1387.035 kb on - strand at 1387.035 kb on - strand at 1387.077 kb on + strand at 1387.077 kb on + strand at 1387.077 kb on + strand at 1387.077 kb on + strand at 1387.077 kb on + strand at 1387.077 kb on + strand at 1387.077 kb on + strand at 1387.077 kb on + strand at 1387.078 kb on - strand at 1387.078 kb on - strand at 1387.078 kb on - strand at 1387.078 kb on - strand at 1387.078 kb on - strand at 1387.078 kb on - strand at 1387.078 kb on - strand at 1387.078 kb on - strand at 1387.078 kb on - strand at 1387.078 kb on - strand at 1387.080 kb on + strand, within PfGW456L13_1240 at 1387.080 kb on + strand, within PfGW456L13_1240 at 1387.080 kb on + strand, within PfGW456L13_1240 at 1387.080 kb on + strand, within PfGW456L13_1240 at 1387.080 kb on + strand, within PfGW456L13_1240 at 1387.080 kb on + strand, within PfGW456L13_1240 at 1387.080 kb on + strand, within PfGW456L13_1240 at 1387.080 kb on + strand, within PfGW456L13_1240 at 1387.080 kb on + strand, within PfGW456L13_1240 at 1387.080 kb on + strand, within PfGW456L13_1240 at 1387.081 kb on - strand, within PfGW456L13_1240 at 1387.081 kb on - strand, within PfGW456L13_1240 at 1387.081 kb on - strand, within PfGW456L13_1240 at 1387.081 kb on - strand, within PfGW456L13_1240 at 1387.081 kb on - strand, within PfGW456L13_1240 at 1387.081 kb on - strand, within PfGW456L13_1240 at 1387.161 kb on - strand, within PfGW456L13_1240 at 1387.161 kb on - strand, within PfGW456L13_1240 at 1387.205 kb on + strand, within PfGW456L13_1240 at 1387.206 kb on - strand, within PfGW456L13_1240 at 1387.206 kb on - strand, within PfGW456L13_1240 at 1387.206 kb on - strand, within PfGW456L13_1240 at 1387.236 kb on + strand, within PfGW456L13_1240 at 1387.237 kb on - strand, within PfGW456L13_1240 at 1387.237 kb on - strand, within PfGW456L13_1240 at 1387.250 kb on + strand, within PfGW456L13_1240 at 1387.251 kb on - strand, within PfGW456L13_1240 at 1387.251 kb on - strand, within PfGW456L13_1240
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.002 mg/ml remove 1,385,225 + +0.4 1,385,272 + -0.0 1,385,272 + +0.7 1,385,272 + +1.1 1,385,296 - -0.7 1,385,342 + -0.6 1,385,352 + -0.7 1,385,352 + +0.2 1,385,352 + -0.3 1,385,384 + -0.3 1,385,384 + +0.7 1,385,384 + -0.2 1,385,409 + -0.9 1,385,460 + PfGW456L13_1238 0.14 -1.0 1,385,466 + PfGW456L13_1238 0.14 -0.7 1,385,528 + PfGW456L13_1238 0.21 -1.0 1,387,034 + +1.3 1,387,034 + +0.7 1,387,034 + +0.0 1,387,035 - +1.1 1,387,035 - +0.0 1,387,077 + -0.3 1,387,077 + -0.2 1,387,077 + +0.1 1,387,077 + -0.0 1,387,077 + +0.0 1,387,077 + +0.7 1,387,077 + +1.0 1,387,077 + +0.0 1,387,078 - +0.8 1,387,078 - +1.0 1,387,078 - +1.3 1,387,078 - -0.2 1,387,078 - +0.4 1,387,078 - +0.4 1,387,078 - +0.4 1,387,078 - +0.3 1,387,078 - -0.6 1,387,078 - +0.6 1,387,080 + PfGW456L13_1240 0.10 -0.7 1,387,080 + PfGW456L13_1240 0.10 +0.3 1,387,080 + PfGW456L13_1240 0.10 -0.6 1,387,080 + PfGW456L13_1240 0.10 +0.5 1,387,080 + PfGW456L13_1240 0.10 -0.4 1,387,080 + PfGW456L13_1240 0.10 +0.6 1,387,080 + PfGW456L13_1240 0.10 +0.4 1,387,080 + PfGW456L13_1240 0.10 +1.1 1,387,080 + PfGW456L13_1240 0.10 +0.8 1,387,080 + PfGW456L13_1240 0.10 +0.2 1,387,081 - PfGW456L13_1240 0.10 +0.3 1,387,081 - PfGW456L13_1240 0.10 +0.2 1,387,081 - PfGW456L13_1240 0.10 +0.6 1,387,081 - PfGW456L13_1240 0.10 +1.8 1,387,081 - PfGW456L13_1240 0.10 +0.6 1,387,081 - PfGW456L13_1240 0.10 -0.3 1,387,161 - PfGW456L13_1240 0.29 -0.8 1,387,161 - PfGW456L13_1240 0.29 -0.1 1,387,205 + PfGW456L13_1240 0.39 +0.1 1,387,206 - PfGW456L13_1240 0.39 -0.2 1,387,206 - PfGW456L13_1240 0.39 +0.1 1,387,206 - PfGW456L13_1240 0.39 +1.2 1,387,236 + PfGW456L13_1240 0.46 -0.8 1,387,237 - PfGW456L13_1240 0.46 +0.3 1,387,237 - PfGW456L13_1240 0.46 +0.6 1,387,250 + PfGW456L13_1240 0.49 +1.9 1,387,251 - PfGW456L13_1240 0.49 +1.6 1,387,251 - PfGW456L13_1240 0.49 +1.8
Or see this region's nucleotide sequence