Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS29550

Experiment: L-Arabinose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C); with MOPS
6,556,389	-				+0.5
6,556,400	-				-0.0
6,556,416	-				+0.3
6,556,416	-				+0.1
6,556,456	+				+0.3
6,556,456	+				+1.1
6,556,456	+				+1.1
6,556,457	-				-0.0
6,556,464	+				+1.4
6,556,464	+				+2.3
6,556,464	+				-0.3
6,556,464	+				+2.3
6,556,464	+				+0.9
6,556,464	+				+2.4
6,556,464	+				-0.5
6,556,465	-				+1.1
6,556,465	-				+1.3
6,556,465	-				+3.3
6,556,465	-				+1.8
6,556,469	+				+0.7
6,556,469	+				-1.2
6,556,469	+				-2.1
6,556,470	-				+2.3
6,556,470	-				+0.9
6,556,470	-				+1.3
6,556,470	-				+2.1
6,556,470	-				-1.2
6,556,636	+		PFLU_RS29545	0.20	+1.1
6,556,636	+		PFLU_RS29545	0.20	+1.0
6,556,636	+		PFLU_RS29545	0.20	-0.7
6,556,636	+		PFLU_RS29545	0.20	+0.3
6,556,636	+		PFLU_RS29545	0.20	+0.2
6,556,636	+		PFLU_RS29545	0.20	-0.3
6,556,637	-		PFLU_RS29545	0.21	-2.9
6,556,637	-		PFLU_RS29545	0.21	-0.3
6,556,637	-		PFLU_RS29545	0.21	+0.7
6,556,742	+		PFLU_RS29545	0.32	+0.6
6,556,742	+		PFLU_RS29545	0.32	+2.7
6,556,742	+		PFLU_RS29545	0.32	+0.4
6,556,742	+		PFLU_RS29545	0.32	+0.6
6,556,742	+		PFLU_RS29545	0.32	+1.4
6,556,742	+		PFLU_RS29545	0.32	-0.3
6,556,743	-		PFLU_RS29545	0.32	+1.0
6,556,743	-		PFLU_RS29545	0.32	+2.7
6,556,743	-		PFLU_RS29545	0.32	+1.7
6,556,743	-		PFLU_RS29545	0.32	-1.9
6,556,743	-		PFLU_RS29545	0.32	+0.1
6,556,757	+		PFLU_RS29545	0.34	-1.8
6,556,757	+		PFLU_RS29545	0.34	+1.1
6,556,758	-		PFLU_RS29545	0.34	+1.9
6,556,814	+		PFLU_RS29545	0.40	+2.4
6,556,814	+		PFLU_RS29545	0.40	+2.1
6,556,814	+		PFLU_RS29545	0.40	+1.7
6,556,814	+		PFLU_RS29545	0.40	+2.1
6,556,814	+		PFLU_RS29545	0.40	+1.0
6,556,814	+		PFLU_RS29545	0.40	-0.7
6,556,814	+		PFLU_RS29545	0.40	+1.3
6,556,814	+		PFLU_RS29545	0.40	+0.9
6,556,814	+		PFLU_RS29545	0.40	-0.5
6,556,814	+		PFLU_RS29545	0.40	+1.9
6,556,814	+		PFLU_RS29545	0.40	+2.2
6,556,814	+		PFLU_RS29545	0.40	+1.4
6,556,814	+		PFLU_RS29545	0.40	-1.4
6,556,815	-		PFLU_RS29545	0.40	-0.9
6,556,815	-		PFLU_RS29545	0.40	-0.9
6,556,815	-		PFLU_RS29545	0.40	+0.0
6,556,815	-		PFLU_RS29545	0.40	+0.2
6,556,815	-		PFLU_RS29545	0.40	-1.8
6,556,815	-		PFLU_RS29545	0.40	+1.3
6,556,815	-		PFLU_RS29545	0.40	+1.3
6,556,815	-		PFLU_RS29545	0.40	-0.3
6,556,815	-		PFLU_RS29545	0.40	-0.0
6,556,815	-		PFLU_RS29545	0.40	-2.5
6,556,815	-		PFLU_RS29545	0.40	-0.9
6,556,815	-		PFLU_RS29545	0.40	+1.7
6,556,943	+		PFLU_RS29545	0.54	+1.1
6,556,943	+		PFLU_RS29545	0.54	+0.9
6,556,943	+		PFLU_RS29545	0.54	+0.3
6,556,943	+		PFLU_RS29545	0.54	+0.3
6,557,207	+		PFLU_RS29545	0.82	+1.5
6,557,207	+		PFLU_RS29545	0.82	-0.3
6,557,207	+		PFLU_RS29545	0.82	+0.2
6,557,207	+		PFLU_RS29545	0.82	+1.1
6,557,207	+		PFLU_RS29545	0.82	+0.6
6,557,207	+		PFLU_RS29545	0.82	+1.1
6,557,208	-		PFLU_RS29545	0.83	+0.1
6,557,208	-		PFLU_RS29545	0.83	+1.1
6,557,208	-		PFLU_RS29545	0.83	+0.1
6,557,208	-		PFLU_RS29545	0.83	-0.3
6,557,208	-		PFLU_RS29545	0.83	+0.3
6,557,366	+				+1.3
6,557,366	+				-0.2
6,557,367	-				+1.4
6,557,367	-				-0.9
6,557,367	-				+0.5
6,557,367	-				+0.7
6,557,377	-				-0.3
6,557,500	+				-0.9
6,557,501	-				-0.5
6,557,537	+				-1.7
6,557,538	-				-3.0
6,557,538	-				-0.3
6,557,659	+		PFLU_RS29550	0.14	-1.8
6,557,659	+		PFLU_RS29550	0.14	-2.8
6,557,659	+		PFLU_RS29550	0.14	-1.8
6,557,660	-		PFLU_RS29550	0.14	-1.1
6,557,755	+		PFLU_RS29550	0.18	-1.8
6,557,755	+		PFLU_RS29550	0.18	-0.5
6,557,755	+		PFLU_RS29550	0.18	-0.5
6,557,755	+		PFLU_RS29550	0.18	-1.7
6,557,755	+		PFLU_RS29550	0.18	-0.9
6,557,755	+		PFLU_RS29550	0.18	+1.3
6,557,756	-		PFLU_RS29550	0.18	-1.4
6,557,756	-		PFLU_RS29550	0.18	-2.3
6,557,756	-		PFLU_RS29550	0.18	-0.0
6,557,756	-		PFLU_RS29550	0.18	-2.6
6,557,756	-		PFLU_RS29550	0.18	-1.3
6,557,756	-		PFLU_RS29550	0.18	-2.9
6,557,756	-		PFLU_RS29550	0.18	-2.8
6,557,756	-		PFLU_RS29550	0.18	-0.5
6,557,824	+		PFLU_RS29550	0.22	-2.3
6,557,942	-		PFLU_RS29550	0.27	-1.7
6,557,942	-		PFLU_RS29550	0.27	-1.3
6,557,942	-		PFLU_RS29550	0.27	-2.5
6,557,942	-		PFLU_RS29550	0.27	-1.4
6,558,157	+		PFLU_RS29550	0.38	-1.3
6,558,158	-		PFLU_RS29550	0.38	-0.3
6,558,221	-		PFLU_RS29550	0.41	-1.0
6,558,221	-		PFLU_RS29550	0.41	-0.4
6,558,221	-		PFLU_RS29550	0.41	+0.3
6,558,692	-		PFLU_RS29550	0.63	-1.3
6,558,756	-		PFLU_RS29550	0.66	-0.0
6,558,756	-		PFLU_RS29550	0.66	-0.6
6,558,756	-		PFLU_RS29550	0.66	-1.9
6,558,756	-		PFLU_RS29550	0.66	-2.1
6,558,829	+		PFLU_RS29550	0.70	+1.1
6,558,829	+		PFLU_RS29550	0.70	-0.8
6,558,840	+		PFLU_RS29550	0.70	-0.6
6,558,841	-		PFLU_RS29550	0.71	-0.0
6,558,841	-		PFLU_RS29550	0.71	-1.7
6,558,892	+		PFLU_RS29550	0.73	-1.6
6,558,892	+		PFLU_RS29550	0.73	-1.3
6,558,892	+		PFLU_RS29550	0.73	-2.4
6,558,893	-		PFLU_RS29550	0.73	+0.4
6,558,893	-		PFLU_RS29550	0.73	-0.0
6,558,893	-		PFLU_RS29550	0.73	-2.9
6,558,893	-		PFLU_RS29550	0.73	-0.4
6,558,924	+		PFLU_RS29550	0.75	-0.9
6,558,925	-		PFLU_RS29550	0.75	+0.7
6,558,925	-		PFLU_RS29550	0.75	-2.7
6,559,034	+		PFLU_RS29550	0.80	-0.7
6,559,035	-		PFLU_RS29550	0.80	-2.3
6,559,035	-		PFLU_RS29550	0.80	-0.5
6,559,035	-		PFLU_RS29550	0.80	-1.0
6,559,162	+		PFLU_RS29550	0.86	-1.3
6,559,163	-		PFLU_RS29550	0.86	-0.9
6,559,466	+				-2.0
6,559,466	+				+0.8
6,559,479	+				-0.7
6,559,479	+				+1.5
6,559,479	+				+1.4
6,559,479	+				-1.5
6,559,479	+				-0.8
6,559,479	+				-0.4
6,559,479	+				+0.6
6,559,479	+				+0.5
6,559,479	+				+0.7
6,559,479	+				+2.3
6,559,479	+				+0.4
6,559,479	+				+0.2
6,559,479	+				+1.2
6,559,479	+				-0.4
6,559,479	+				-0.1
6,559,479	+				-0.5
6,559,479	+				-0.0
6,559,479	+				+0.7
6,559,479	+				+1.5
6,559,479	+				-1.6
6,559,479	+				-0.3
6,559,479	+				+1.0
6,559,479	+				+0.5
6,559,479	+				+0.0
6,559,479	+				+0.7
6,559,479	+				+0.5
6,559,479	+				-0.9
6,559,480	-				+2.5
6,559,480	-				-2.0
6,559,480	-				+0.9
6,559,480	-				-0.0
6,559,480	-				+0.7
6,559,480	-				+2.2
6,559,480	-				+0.5
6,559,480	-				+0.6
6,559,480	-				+0.1
6,559,480	-				+1.7
6,559,480	-				-0.3
6,559,480	-				-1.6
6,559,480	-				+1.2
6,559,480	-				-1.7
6,559,480	-				+1.3
6,559,480	-				+0.9
6,559,480	-				-1.3
6,559,480	-				-1.5
6,559,480	-				+0.4
6,559,480	-				+0.2
6,559,480	-				-1.3
6,559,480	-				-0.3
6,559,480	-				+0.4
6,559,480	-				+0.9
6,559,480	-				+0.6
6,559,480	-				-2.1
6,559,480	-				-0.0
6,559,483	+				+0.8
6,559,483	+				-1.4
6,559,483	+				-0.9
6,559,483	+				+0.4
6,559,484	-				-0.2
6,559,484	-				+0.2
6,559,484	-				-0.6
6,559,484	-				+2.1
6,559,490	+				+0.6
6,559,495	+				+0.6
6,559,495	+				+0.7
6,559,496	-				-0.7
6,559,496	-				-0.4
6,559,497	+				-1.1
6,559,497	+				+0.8
6,559,497	+				+0.5
6,559,497	+				-0.3
6,559,498	-				-1.4
6,559,498	-				-1.6
6,559,498	-				-0.4
6,559,512	-				-2.5
6,559,512	-				-1.7
6,559,614	-				-2.5
6,559,630	+				-1.2
6,559,631	-				-0.8
6,559,860	+		PFLU_RS29555	0.24	+1.4
6,560,247	+		PFLU_RS29555	0.51	-0.2
6,560,247	+		PFLU_RS29555	0.51	+0.1
6,560,247	+		PFLU_RS29555	0.51	-1.7
6,560,248	-		PFLU_RS29555	0.51	-0.3
6,560,248	-		PFLU_RS29555	0.51	+0.2
6,560,250	+		PFLU_RS29555	0.51	-3.0
6,560,250	+		PFLU_RS29555	0.51	-1.7
6,560,250	+		PFLU_RS29555	0.51	-3.0
6,560,250	+		PFLU_RS29555	0.51	+4.6
6,560,251	-		PFLU_RS29555	0.51	-0.8
6,560,251	-		PFLU_RS29555	0.51	-1.8
6,560,395	-		PFLU_RS29555	0.62	-1.3
6,560,412	+		PFLU_RS29555	0.63	+0.0
6,560,412	+		PFLU_RS29555	0.63	+0.8
6,560,412	+		PFLU_RS29555	0.63	-1.8
6,560,412	+		PFLU_RS29555	0.63	-0.8
6,560,412	+		PFLU_RS29555	0.63	-1.9
6,560,412	+		PFLU_RS29555	0.63	-0.8
6,560,413	-		PFLU_RS29555	0.63	+0.5
6,560,413	-		PFLU_RS29555	0.63	-0.2
6,560,413	-		PFLU_RS29555	0.63	+0.3
6,560,413	-		PFLU_RS29555	0.63	+0.2
6,560,413	-		PFLU_RS29555	0.63	+0.8
6,560,413	-		PFLU_RS29555	0.63	-0.1
6,560,413	-		PFLU_RS29555	0.63	-2.2
6,560,413	-		PFLU_RS29555	0.63	+0.3