Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS26370

Experiment: L-Arabinose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C); with MOPS
5,897,630	+				+1.0
5,897,630	+				-2.0
5,897,630	+				+1.1
5,897,631	-				-1.5
5,897,631	-				-0.3
5,897,631	-				-0.6
5,897,640	+				+0.7
5,897,700	+				-1.6
5,897,700	+				+0.2
5,897,700	+				-1.6
5,897,768	+				+0.6
5,897,784	+				-0.1
5,897,872	+		PFLU_RS26365	0.16	-0.6
5,897,872	+		PFLU_RS26365	0.16	+0.3
5,897,873	-		PFLU_RS26365	0.16	+0.2
5,898,038	+		PFLU_RS26365	0.42	+0.8
5,898,038	+		PFLU_RS26365	0.42	-2.8
5,898,038	+		PFLU_RS26365	0.42	+1.3
5,898,038	+		PFLU_RS26365	0.42	-1.5
5,898,038	+		PFLU_RS26365	0.42	+1.1
5,898,039	-		PFLU_RS26365	0.42	-0.2
5,898,039	-		PFLU_RS26365	0.42	+1.5
5,898,039	-		PFLU_RS26365	0.42	-0.2
5,898,039	-		PFLU_RS26365	0.42	+0.3
5,898,039	-		PFLU_RS26365	0.42	+0.8
5,898,039	-		PFLU_RS26365	0.42	+1.5
5,898,042	+		PFLU_RS26365	0.42	-1.4
5,898,043	-		PFLU_RS26365	0.42	+0.1
5,898,043	-		PFLU_RS26365	0.42	-2.4
5,898,043	-		PFLU_RS26365	0.42	+0.8
5,898,043	-		PFLU_RS26365	0.42	-0.5
5,898,137	-		PFLU_RS26365	0.57	+0.1
5,898,198	+		PFLU_RS26365	0.67	-2.4
5,898,199	-		PFLU_RS26365	0.67	+1.4
5,898,222	+		PFLU_RS26365	0.70	+0.2
5,898,222	+		PFLU_RS26365	0.70	-2.2
5,898,222	+		PFLU_RS26365	0.70	+0.5
5,898,222	+		PFLU_RS26365	0.70	+0.3
5,898,222	+		PFLU_RS26365	0.70	+1.9
5,898,222	+		PFLU_RS26365	0.70	-0.5
5,898,222	+		PFLU_RS26365	0.70	-3.4
5,898,222	+		PFLU_RS26365	0.70	+2.1
5,898,223	-		PFLU_RS26365	0.70	-0.7
5,898,223	-		PFLU_RS26365	0.70	+0.9
5,898,223	-		PFLU_RS26365	0.70	+1.0
5,898,223	-		PFLU_RS26365	0.70	+0.7
5,898,223	-		PFLU_RS26365	0.70	-0.5
5,898,223	-		PFLU_RS26365	0.70	+0.5
5,898,223	-		PFLU_RS26365	0.70	-0.5
5,898,235	+		PFLU_RS26365	0.72	-0.8
5,898,246	+		PFLU_RS26365	0.74	+0.6
5,898,246	+		PFLU_RS26365	0.74	-0.3
5,898,247	-		PFLU_RS26365	0.74	-2.7
5,898,249	+		PFLU_RS26365	0.74	+0.7
5,898,249	+		PFLU_RS26365	0.74	+1.3
5,898,249	+		PFLU_RS26365	0.74	-0.8
5,898,249	+		PFLU_RS26365	0.74	+0.7
5,898,249	+		PFLU_RS26365	0.74	+0.3
5,898,250	-		PFLU_RS26365	0.75	-0.9
5,898,250	-		PFLU_RS26365	0.75	-0.5
5,898,252	+		PFLU_RS26365	0.75	+0.3
5,898,252	+		PFLU_RS26365	0.75	+0.9
5,898,252	+		PFLU_RS26365	0.75	-1.4
5,898,252	+		PFLU_RS26365	0.75	-2.5
5,898,252	+		PFLU_RS26365	0.75	-0.1
5,898,252	+		PFLU_RS26365	0.75	+0.1
5,898,252	+		PFLU_RS26365	0.75	-0.6
5,898,252	+		PFLU_RS26365	0.75	+1.2
5,898,252	+		PFLU_RS26365	0.75	-0.0
5,898,252	+		PFLU_RS26365	0.75	+1.4
5,898,252	+		PFLU_RS26365	0.75	+0.7
5,898,252	+		PFLU_RS26365	0.75	+0.4
5,898,252	+		PFLU_RS26365	0.75	-0.1
5,898,252	+		PFLU_RS26365	0.75	+0.9
5,898,253	-		PFLU_RS26365	0.75	+1.1
5,898,253	-		PFLU_RS26365	0.75	-0.1
5,898,253	-		PFLU_RS26365	0.75	-0.7
5,898,253	-		PFLU_RS26365	0.75	+1.1
5,898,253	-		PFLU_RS26365	0.75	+1.2
5,898,253	-		PFLU_RS26365	0.75	+0.8
5,898,253	-		PFLU_RS26365	0.75	+1.8
5,898,253	-		PFLU_RS26365	0.75	+2.1
5,898,253	-		PFLU_RS26365	0.75	-0.3
5,898,253	-		PFLU_RS26365	0.75	-0.8
5,898,253	-		PFLU_RS26365	0.75	+1.2
5,898,253	-		PFLU_RS26365	0.75	-1.5
5,898,253	-		PFLU_RS26365	0.75	-1.7
5,898,253	-		PFLU_RS26365	0.75	-1.6
5,898,253	-		PFLU_RS26365	0.75	-0.8
5,898,253	-		PFLU_RS26365	0.75	-1.4
5,898,253	-		PFLU_RS26365	0.75	+0.4
5,898,253	-		PFLU_RS26365	0.75	-0.4
5,898,253	-		PFLU_RS26365	0.75	-2.4
5,898,253	-		PFLU_RS26365	0.75	+0.7
5,898,253	-		PFLU_RS26365	0.75	-1.1
5,898,253	-		PFLU_RS26365	0.75	+1.9
5,898,350	+				-1.1
5,898,351	-				+1.0
5,898,351	-				+0.3
5,898,434	-				+0.6
5,898,448	+				-0.1
5,898,491	+				-0.5
5,898,492	-				-1.4
5,898,493	+				-1.3
5,898,493	+				+0.7
5,898,494	-				-0.6
5,898,494	-				+0.3
5,898,494	-				-1.3
5,898,578	+				-1.5
5,898,636	-				+1.4
5,898,636	-				-0.1
5,898,636	-				+0.4
5,898,636	-				-2.0
5,898,646	+				+0.1
5,898,646	+				+0.7
5,898,646	+				-2.0
5,898,646	+				-0.6
5,898,646	+				-0.0
5,898,674	+				-1.1
5,898,674	+				-2.3
5,898,675	-				-0.2
5,898,675	-				-0.2
5,898,675	-				+0.5
5,898,675	-				-0.4
5,898,675	-				+0.5
5,898,675	-				-0.2
5,898,686	+		PFLU_RS26370	0.10	+2.2
5,898,686	+		PFLU_RS26370	0.10	+0.2
5,898,686	+		PFLU_RS26370	0.10	+0.5
5,898,686	+		PFLU_RS26370	0.10	+0.8
5,898,686	+		PFLU_RS26370	0.10	+1.3
5,898,686	+		PFLU_RS26370	0.10	+0.0
5,898,686	+		PFLU_RS26370	0.10	+1.1
5,898,686	+		PFLU_RS26370	0.10	+0.7
5,898,686	+		PFLU_RS26370	0.10	-3.3
5,898,686	+		PFLU_RS26370	0.10	-1.1
5,898,686	+		PFLU_RS26370	0.10	+0.4
5,898,686	+		PFLU_RS26370	0.10	+1.1
5,898,686	+		PFLU_RS26370	0.10	+0.5
5,898,686	+		PFLU_RS26370	0.10	-1.6
5,898,686	+		PFLU_RS26370	0.10	+0.3
5,898,686	+		PFLU_RS26370	0.10	+0.5
5,898,686	+		PFLU_RS26370	0.10	-0.3
5,898,687	-		PFLU_RS26370	0.10	+0.2
5,898,687	-		PFLU_RS26370	0.10	-0.4
5,898,687	-		PFLU_RS26370	0.10	-1.7
5,898,687	-		PFLU_RS26370	0.10	+0.9
5,898,687	-		PFLU_RS26370	0.10	-2.4
5,898,687	-		PFLU_RS26370	0.10	+0.7
5,898,687	-		PFLU_RS26370	0.10	+1.0
5,898,687	-		PFLU_RS26370	0.10	+1.1
5,898,687	-		PFLU_RS26370	0.10	+2.0
5,898,687	-		PFLU_RS26370	0.10	-0.4
5,898,690	-		PFLU_RS26370	0.11	+0.2
5,898,746	+		PFLU_RS26370	0.13	+0.5
5,898,746	+		PFLU_RS26370	0.13	+0.8
5,898,747	-		PFLU_RS26370	0.14	+0.1
5,898,747	-		PFLU_RS26370	0.14	-0.1
5,898,747	-		PFLU_RS26370	0.14	-1.8
5,898,747	-		PFLU_RS26370	0.14	-0.7
5,898,749	+		PFLU_RS26370	0.14	+0.2
5,898,749	+		PFLU_RS26370	0.14	+1.8
5,898,749	+		PFLU_RS26370	0.14	-0.2
5,898,749	+		PFLU_RS26370	0.14	+0.1
5,898,749	+		PFLU_RS26370	0.14	-2.0
5,898,749	+		PFLU_RS26370	0.14	-1.2
5,898,749	+		PFLU_RS26370	0.14	+0.6
5,898,749	+		PFLU_RS26370	0.14	-0.8
5,898,750	-		PFLU_RS26370	0.14	-0.9
5,898,750	-		PFLU_RS26370	0.14	+0.2
5,898,857	+		PFLU_RS26370	0.19	-0.7
5,898,903	+		PFLU_RS26370	0.22	-3.6
5,898,903	+		PFLU_RS26370	0.22	-1.2
5,898,904	-		PFLU_RS26370	0.22	-0.3
5,898,904	-		PFLU_RS26370	0.22	+0.3
5,898,965	+		PFLU_RS26370	0.25	-2.2
5,899,019	+		PFLU_RS26370	0.28	-0.0
5,899,019	+		PFLU_RS26370	0.28	-0.5
5,899,019	+		PFLU_RS26370	0.28	-0.0
5,899,019	+		PFLU_RS26370	0.28	-0.2
5,899,019	+		PFLU_RS26370	0.28	+0.4
5,899,020	-		PFLU_RS26370	0.28	-0.6
5,899,133	+		PFLU_RS26370	0.34	+0.9
5,899,133	+		PFLU_RS26370	0.34	-3.4
5,899,134	-		PFLU_RS26370	0.34	+0.3
5,899,134	-		PFLU_RS26370	0.34	+0.2
5,899,164	-		PFLU_RS26370	0.35	-0.8
5,899,164	-		PFLU_RS26370	0.35	+0.5
5,899,164	-		PFLU_RS26370	0.35	+0.7
5,899,247	+		PFLU_RS26370	0.40	-0.0
5,899,247	+		PFLU_RS26370	0.40	-0.1
5,899,248	-		PFLU_RS26370	0.40	-0.4
5,899,248	-		PFLU_RS26370	0.40	+0.7
5,899,350	-		PFLU_RS26370	0.45	-0.3
5,899,514	+		PFLU_RS26370	0.54	+0.9
5,899,515	-		PFLU_RS26370	0.54	-0.6
5,899,533	+		PFLU_RS26370	0.55	-0.9
5,899,604	+		PFLU_RS26370	0.59	+0.5
5,899,604	+		PFLU_RS26370	0.59	+0.3
5,899,604	+		PFLU_RS26370	0.59	+1.0
5,899,605	-		PFLU_RS26370	0.59	+0.2
5,899,605	-		PFLU_RS26370	0.59	+1.8
5,899,605	-		PFLU_RS26370	0.59	-0.3
5,899,605	-		PFLU_RS26370	0.59	+0.9
5,899,697	+		PFLU_RS26370	0.63	+0.2
5,899,995	-		PFLU_RS26370	0.79	-0.5
5,900,053	+		PFLU_RS26370	0.82	+0.1
5,900,054	-		PFLU_RS26370	0.82	-3.7
5,900,054	-		PFLU_RS26370	0.82	-0.1
5,900,054	-		PFLU_RS26370	0.82	+0.6
5,900,054	-		PFLU_RS26370	0.82	+0.7
5,900,223	+				-2.3
5,900,224	-				+1.7
5,900,224	-				+0.9
5,900,224	-				-0.5
5,900,224	-				-1.4
5,900,224	-				+0.5
5,900,253	+				+0.6
5,900,253	+				-0.2
5,900,254	-				+0.2
5,900,276	+				+1.4
5,900,276	+				-1.9
5,900,276	+				+1.5
5,900,276	+				+0.8
5,900,277	-				-0.3
5,900,277	-				-1.2
5,900,277	-				-1.2
5,900,277	-				+1.6
5,900,277	-				-0.6
5,900,277	-				+0.6
5,900,277	-				+0.1
5,900,279	+				+0.7
5,900,279	+				+1.0
5,900,279	+				+0.3
5,900,279	+				+0.1
5,900,279	+				-1.2
5,900,279	+				+0.2
5,900,279	+				+1.8
5,900,280	-				-0.2
5,900,280	-				+0.4
5,900,280	-				+0.6
5,900,280	-				-0.3
5,900,379	+				+1.0
5,900,379	+				-0.5
5,900,379	+				-0.1
5,900,380	-				+0.2
5,900,380	-				-1.4
5,900,380	-				-0.6
5,900,380	-				+0.9
5,900,422	-				-0.5
5,900,422	-				+0.1
5,900,422	-				-0.1
5,900,422	-				-1.4
5,900,422	-				-0.7
5,900,422	-				+0.4
5,900,422	-				+0.6
5,900,425	+				+1.0
5,900,426	-				+1.3
5,900,435	+				+0.6
5,900,436	-				-0.8
5,900,436	-				-2.1
5,900,507	+				+0.1
5,900,507	+				-0.9
5,900,508	-				-0.8
5,900,585	-				+0.7
5,900,754	+		PFLU_RS26375	0.11	+0.8
5,900,754	+		PFLU_RS26375	0.11	+0.7
5,900,754	+		PFLU_RS26375	0.11	+1.0
5,900,754	+		PFLU_RS26375	0.11	+0.4
5,900,754	+		PFLU_RS26375	0.11	-1.7
5,900,754	+		PFLU_RS26375	0.11	-0.5
5,900,754	+		PFLU_RS26375	0.11	+0.2
5,900,755	-		PFLU_RS26375	0.11	+0.4
5,900,755	-		PFLU_RS26375	0.11	-0.5
5,900,755	-		PFLU_RS26375	0.11	-0.1
5,900,755	-		PFLU_RS26375	0.11	-0.1
5,900,755	-		PFLU_RS26375	0.11	-0.4
5,900,755	-		PFLU_RS26375	0.11	+1.1
5,900,755	-		PFLU_RS26375	0.11	-0.4
5,900,827	-		PFLU_RS26375	0.16	-1.9
5,900,933	-		PFLU_RS26375	0.24	+0.7
5,900,990	+		PFLU_RS26375	0.28	+0.4
5,901,005	+		PFLU_RS26375	0.29	+0.6
5,901,006	-		PFLU_RS26375	0.29	+0.5
5,901,240	+		PFLU_RS26375	0.47	+0.4
5,901,240	+		PFLU_RS26375	0.47	+0.7
5,901,240	+		PFLU_RS26375	0.47	+0.5
5,901,240	+		PFLU_RS26375	0.47	-0.1
5,901,241	-		PFLU_RS26375	0.47	-0.5
5,901,241	-		PFLU_RS26375	0.47	-1.1
5,901,241	-		PFLU_RS26375	0.47	+1.2
5,901,241	-		PFLU_RS26375	0.47	+0.5
5,901,241	-		PFLU_RS26375	0.47	-0.9
5,901,243	+		PFLU_RS26375	0.47	+1.0
5,901,243	+		PFLU_RS26375	0.47	-0.4
5,901,243	+		PFLU_RS26375	0.47	-0.8
5,901,243	+		PFLU_RS26375	0.47	+0.8
5,901,243	+		PFLU_RS26375	0.47	+1.1
5,901,243	+		PFLU_RS26375	0.47	+1.3
5,901,243	+		PFLU_RS26375	0.47	-1.6
5,901,243	+		PFLU_RS26375	0.47	+1.2
5,901,243	+		PFLU_RS26375	0.47	-0.5
5,901,243	+		PFLU_RS26375	0.47	+0.7
5,901,243	+		PFLU_RS26375	0.47	-0.2
5,901,243	+		PFLU_RS26375	0.47	+1.4
5,901,243	+		PFLU_RS26375	0.47	-0.3
5,901,243	+		PFLU_RS26375	0.47	+0.8
5,901,243	+		PFLU_RS26375	0.47	-0.1
5,901,243	+		PFLU_RS26375	0.47	+1.1
5,901,244	-		PFLU_RS26375	0.47	-0.6
5,901,244	-		PFLU_RS26375	0.47	-1.0
5,901,244	-		PFLU_RS26375	0.47	-0.4
5,901,244	-		PFLU_RS26375	0.47	-0.5
5,901,288	+		PFLU_RS26375	0.51	+0.0
5,901,288	+		PFLU_RS26375	0.51	-0.9
5,901,289	-		PFLU_RS26375	0.51	+0.1
5,901,379	-		PFLU_RS26375	0.57	-1.2