Experiment: L-Arabinose (C); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS23645 and PFLU_RS23650 are separated by 364 nucleotides PFLU_RS23650 and PFLU_RS23655 are separated by 59 nucleotides PFLU_RS23655 and PFLU_RS23660 are separated by 75 nucleotides
PFLU_RS23645: PFLU_RS23645 - glutathione transferase GstA, at 5,302,097 to 5,302,699
_RS23645
PFLU_RS23650: PFLU_RS23650 - GNAT family N-acetyltransferase, at 5,303,064 to 5,303,501
_RS23650
PFLU_RS23655: PFLU_RS23655 - class I SAM-dependent methyltransferase, at 5,303,561 to 5,304,379
_RS23655
PFLU_RS23660: PFLU_RS23660 - peptide deformylase, at 5,304,455 to 5,304,994
_RS23660
Position (kb) 5303
5304 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5302.106 kb on + strand at 5302.106 kb on + strand at 5302.106 kb on + strand at 5302.106 kb on + strand at 5302.107 kb on - strand at 5302.107 kb on - strand at 5302.107 kb on - strand at 5302.248 kb on - strand, within PFLU_RS23645 at 5302.310 kb on + strand, within PFLU_RS23645 at 5302.310 kb on + strand, within PFLU_RS23645 at 5302.310 kb on + strand, within PFLU_RS23645 at 5302.310 kb on + strand, within PFLU_RS23645 at 5302.310 kb on + strand, within PFLU_RS23645 at 5302.310 kb on + strand, within PFLU_RS23645 at 5302.311 kb on - strand, within PFLU_RS23645 at 5302.311 kb on - strand, within PFLU_RS23645 at 5302.311 kb on - strand, within PFLU_RS23645 at 5302.529 kb on + strand, within PFLU_RS23645 at 5302.529 kb on + strand, within PFLU_RS23645 at 5302.530 kb on - strand, within PFLU_RS23645 at 5302.565 kb on + strand, within PFLU_RS23645 at 5302.604 kb on - strand, within PFLU_RS23645 at 5302.702 kb on + strand at 5302.702 kb on + strand at 5302.703 kb on - strand at 5302.792 kb on + strand at 5302.792 kb on + strand at 5302.793 kb on - strand at 5302.797 kb on + strand at 5302.798 kb on - strand at 5302.947 kb on + strand at 5302.947 kb on + strand at 5302.948 kb on - strand at 5302.986 kb on + strand at 5302.986 kb on + strand at 5302.986 kb on + strand at 5302.986 kb on + strand at 5302.986 kb on + strand at 5302.986 kb on + strand at 5302.986 kb on + strand at 5302.986 kb on + strand at 5302.986 kb on + strand at 5302.986 kb on + strand at 5302.986 kb on + strand at 5302.986 kb on + strand at 5302.986 kb on + strand at 5302.986 kb on + strand at 5302.986 kb on + strand at 5302.986 kb on + strand at 5302.986 kb on + strand at 5302.986 kb on + strand at 5302.987 kb on - strand at 5302.987 kb on - strand at 5302.987 kb on - strand at 5302.987 kb on - strand at 5302.987 kb on - strand at 5302.987 kb on - strand at 5302.987 kb on - strand at 5302.987 kb on - strand at 5302.987 kb on - strand at 5302.987 kb on - strand at 5302.987 kb on - strand at 5302.987 kb on - strand at 5302.987 kb on - strand at 5302.987 kb on - strand at 5302.987 kb on - strand at 5302.987 kb on - strand at 5302.987 kb on - strand at 5302.987 kb on - strand at 5302.987 kb on - strand at 5302.987 kb on - strand at 5302.987 kb on - strand at 5302.987 kb on - strand at 5302.987 kb on - strand at 5302.987 kb on - strand at 5302.987 kb on - strand at 5302.987 kb on - strand at 5302.996 kb on + strand at 5302.996 kb on + strand at 5302.996 kb on + strand at 5302.997 kb on - strand at 5302.998 kb on + strand at 5302.998 kb on + strand at 5302.998 kb on + strand at 5302.998 kb on + strand at 5302.998 kb on + strand at 5302.998 kb on + strand at 5302.998 kb on + strand at 5302.998 kb on + strand at 5302.998 kb on + strand at 5302.998 kb on + strand at 5302.998 kb on + strand at 5302.998 kb on + strand at 5302.998 kb on + strand at 5302.999 kb on - strand at 5302.999 kb on - strand at 5302.999 kb on - strand at 5302.999 kb on - strand at 5302.999 kb on - strand at 5302.999 kb on - strand at 5302.999 kb on - strand at 5302.999 kb on - strand at 5302.999 kb on - strand at 5303.005 kb on + strand at 5303.005 kb on + strand at 5303.005 kb on + strand at 5303.005 kb on + strand at 5303.005 kb on + strand at 5303.005 kb on + strand at 5303.005 kb on + strand at 5303.006 kb on - strand at 5303.006 kb on - strand at 5303.006 kb on - strand at 5303.006 kb on - strand at 5303.006 kb on - strand at 5303.026 kb on + strand at 5303.026 kb on + strand at 5303.026 kb on + strand at 5303.026 kb on + strand at 5303.026 kb on + strand at 5303.026 kb on + strand at 5303.026 kb on + strand at 5303.027 kb on - strand at 5303.027 kb on - strand at 5303.027 kb on - strand at 5303.027 kb on - strand at 5303.027 kb on - strand at 5303.027 kb on - strand at 5303.028 kb on + strand at 5303.028 kb on + strand at 5303.028 kb on + strand at 5303.028 kb on + strand at 5303.029 kb on - strand at 5303.029 kb on - strand at 5303.029 kb on - strand at 5303.029 kb on - strand at 5303.029 kb on - strand at 5303.324 kb on + strand, within PFLU_RS23650 at 5303.324 kb on + strand, within PFLU_RS23650 at 5303.324 kb on + strand, within PFLU_RS23650 at 5303.324 kb on + strand, within PFLU_RS23650 at 5303.324 kb on + strand, within PFLU_RS23650 at 5303.325 kb on - strand, within PFLU_RS23650 at 5303.325 kb on - strand, within PFLU_RS23650 at 5303.325 kb on - strand, within PFLU_RS23650 at 5303.325 kb on - strand, within PFLU_RS23650 at 5303.325 kb on - strand, within PFLU_RS23650 at 5303.325 kb on - strand, within PFLU_RS23650 at 5303.325 kb on - strand, within PFLU_RS23650 at 5303.364 kb on + strand, within PFLU_RS23650 at 5303.364 kb on + strand, within PFLU_RS23650 at 5303.364 kb on + strand, within PFLU_RS23650 at 5303.364 kb on + strand, within PFLU_RS23650 at 5303.364 kb on + strand, within PFLU_RS23650 at 5303.364 kb on + strand, within PFLU_RS23650 at 5303.364 kb on + strand, within PFLU_RS23650 at 5303.364 kb on + strand, within PFLU_RS23650 at 5303.364 kb on + strand, within PFLU_RS23650 at 5303.364 kb on + strand, within PFLU_RS23650 at 5303.365 kb on - strand, within PFLU_RS23650 at 5303.365 kb on - strand, within PFLU_RS23650 at 5303.365 kb on - strand, within PFLU_RS23650 at 5303.365 kb on - strand, within PFLU_RS23650 at 5303.365 kb on - strand, within PFLU_RS23650 at 5303.365 kb on - strand, within PFLU_RS23650 at 5303.430 kb on + strand, within PFLU_RS23650 at 5303.430 kb on + strand, within PFLU_RS23650 at 5303.431 kb on - strand, within PFLU_RS23650 at 5303.464 kb on + strand at 5303.464 kb on + strand at 5303.464 kb on + strand at 5303.464 kb on + strand at 5303.464 kb on + strand at 5303.464 kb on + strand at 5303.465 kb on - strand at 5303.465 kb on - strand at 5303.465 kb on - strand at 5303.465 kb on - strand at 5303.465 kb on - strand at 5303.465 kb on - strand at 5303.465 kb on - strand at 5303.465 kb on - strand at 5303.510 kb on + strand at 5303.510 kb on + strand at 5303.510 kb on + strand at 5303.510 kb on + strand at 5303.511 kb on - strand at 5303.524 kb on + strand at 5303.524 kb on + strand at 5303.549 kb on + strand at 5303.549 kb on + strand at 5303.550 kb on - strand at 5303.550 kb on - strand at 5303.793 kb on - strand, within PFLU_RS23655 at 5303.834 kb on + strand, within PFLU_RS23655 at 5303.834 kb on + strand, within PFLU_RS23655 at 5303.834 kb on + strand, within PFLU_RS23655 at 5303.834 kb on + strand, within PFLU_RS23655 at 5303.834 kb on + strand, within PFLU_RS23655 at 5303.834 kb on + strand, within PFLU_RS23655 at 5303.834 kb on + strand, within PFLU_RS23655 at 5303.835 kb on - strand, within PFLU_RS23655 at 5303.835 kb on - strand, within PFLU_RS23655 at 5303.835 kb on - strand, within PFLU_RS23655 at 5303.835 kb on - strand, within PFLU_RS23655 at 5303.835 kb on - strand, within PFLU_RS23655 at 5303.835 kb on - strand, within PFLU_RS23655 at 5303.835 kb on - strand, within PFLU_RS23655 at 5303.870 kb on + strand, within PFLU_RS23655 at 5303.871 kb on - strand, within PFLU_RS23655 at 5303.871 kb on - strand, within PFLU_RS23655 at 5303.871 kb on - strand, within PFLU_RS23655 at 5304.014 kb on - strand, within PFLU_RS23655 at 5304.022 kb on + strand, within PFLU_RS23655 at 5304.023 kb on - strand, within PFLU_RS23655 at 5304.023 kb on - strand, within PFLU_RS23655 at 5304.023 kb on - strand, within PFLU_RS23655 at 5304.023 kb on - strand, within PFLU_RS23655 at 5304.023 kb on - strand, within PFLU_RS23655 at 5304.068 kb on + strand, within PFLU_RS23655 at 5304.068 kb on + strand, within PFLU_RS23655 at 5304.068 kb on + strand, within PFLU_RS23655 at 5304.068 kb on + strand, within PFLU_RS23655 at 5304.069 kb on - strand, within PFLU_RS23655 at 5304.069 kb on - strand, within PFLU_RS23655 at 5304.069 kb on - strand, within PFLU_RS23655 at 5304.069 kb on - strand, within PFLU_RS23655 at 5304.069 kb on - strand, within PFLU_RS23655 at 5304.069 kb on - strand, within PFLU_RS23655 at 5304.069 kb on - strand, within PFLU_RS23655 at 5304.069 kb on - strand, within PFLU_RS23655 at 5304.320 kb on + strand at 5304.320 kb on + strand at 5304.320 kb on + strand at 5304.320 kb on + strand at 5304.320 kb on + strand at 5304.320 kb on + strand at 5304.320 kb on + strand at 5304.320 kb on + strand at 5304.320 kb on + strand at 5304.320 kb on + strand at 5304.320 kb on + strand at 5304.320 kb on + strand at 5304.320 kb on + strand at 5304.320 kb on + strand at 5304.320 kb on + strand at 5304.320 kb on + strand at 5304.320 kb on + strand at 5304.320 kb on + strand at 5304.320 kb on + strand at 5304.320 kb on + strand at 5304.321 kb on - strand at 5304.321 kb on - strand at 5304.321 kb on - strand at 5304.321 kb on - strand at 5304.321 kb on - strand at 5304.321 kb on - strand at 5304.321 kb on - strand at 5304.321 kb on - strand at 5304.321 kb on - strand at 5304.321 kb on - strand at 5304.321 kb on - strand at 5304.321 kb on - strand at 5304.321 kb on - strand at 5304.321 kb on - strand at 5304.321 kb on - strand at 5304.321 kb on - strand at 5304.321 kb on - strand at 5304.377 kb on + strand at 5304.377 kb on + strand at 5304.377 kb on + strand at 5304.378 kb on - strand at 5304.378 kb on - strand at 5304.378 kb on - strand at 5304.378 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose (C); with MOPS remove 5,302,106 + -0.2 5,302,106 + +0.8 5,302,106 + -0.3 5,302,106 + +0.9 5,302,107 - +0.4 5,302,107 - +0.4 5,302,107 - +0.9 5,302,248 - PFLU_RS23645 0.25 -3.0 5,302,310 + PFLU_RS23645 0.35 +0.6 5,302,310 + PFLU_RS23645 0.35 +0.5 5,302,310 + PFLU_RS23645 0.35 -0.4 5,302,310 + PFLU_RS23645 0.35 +0.8 5,302,310 + PFLU_RS23645 0.35 +0.3 5,302,310 + PFLU_RS23645 0.35 -0.7 5,302,311 - PFLU_RS23645 0.35 +0.5 5,302,311 - PFLU_RS23645 0.35 -1.1 5,302,311 - PFLU_RS23645 0.35 -0.9 5,302,529 + PFLU_RS23645 0.72 +0.4 5,302,529 + PFLU_RS23645 0.72 -2.1 5,302,530 - PFLU_RS23645 0.72 +0.2 5,302,565 + PFLU_RS23645 0.78 +0.7 5,302,604 - PFLU_RS23645 0.84 +0.8 5,302,702 + +1.2 5,302,702 + -1.7 5,302,703 - -0.7 5,302,792 + +0.3 5,302,792 + -1.7 5,302,793 - -0.0 5,302,797 + +1.2 5,302,798 - +1.0 5,302,947 + -0.9 5,302,947 + +0.4 5,302,948 - +1.2 5,302,986 + -1.4 5,302,986 + +0.5 5,302,986 + -1.0 5,302,986 + -1.3 5,302,986 + -1.4 5,302,986 + -0.5 5,302,986 + -0.5 5,302,986 + +0.4 5,302,986 + -0.5 5,302,986 + +0.1 5,302,986 + -0.6 5,302,986 + +0.5 5,302,986 + +2.1 5,302,986 + +0.5 5,302,986 + +0.1 5,302,986 + +0.9 5,302,986 + +0.2 5,302,986 + +1.0 5,302,987 - +1.2 5,302,987 - +1.0 5,302,987 - +0.5 5,302,987 - +0.1 5,302,987 - -0.5 5,302,987 - +1.2 5,302,987 - +0.2 5,302,987 - +0.4 5,302,987 - +2.3 5,302,987 - +0.7 5,302,987 - +1.1 5,302,987 - -2.8 5,302,987 - +0.7 5,302,987 - -0.1 5,302,987 - -0.3 5,302,987 - +0.3 5,302,987 - +0.3 5,302,987 - -0.9 5,302,987 - -0.7 5,302,987 - -1.9 5,302,987 - +1.1 5,302,987 - -1.7 5,302,987 - -0.2 5,302,987 - +0.7 5,302,987 - +0.7 5,302,987 - +0.6 5,302,996 + -1.1 5,302,996 + +0.7 5,302,996 + -1.6 5,302,997 - +0.1 5,302,998 + +2.1 5,302,998 + +0.2 5,302,998 + -1.3 5,302,998 + +0.7 5,302,998 + +0.1 5,302,998 + +1.7 5,302,998 + -0.9 5,302,998 + -0.9 5,302,998 + +0.5 5,302,998 + +0.4 5,302,998 + -0.6 5,302,998 + +0.2 5,302,998 + -0.5 5,302,999 - +0.9 5,302,999 - -0.6 5,302,999 - +0.6 5,302,999 - +0.1 5,302,999 - -1.9 5,302,999 - +1.0 5,302,999 - +0.0 5,302,999 - +0.2 5,302,999 - +0.6 5,303,005 + -0.3 5,303,005 + +0.5 5,303,005 + -0.1 5,303,005 + +0.4 5,303,005 + -2.3 5,303,005 + +0.9 5,303,005 + +0.2 5,303,006 - +0.1 5,303,006 - -0.8 5,303,006 - +0.5 5,303,006 - +0.3 5,303,006 - +0.2 5,303,026 + -0.4 5,303,026 + +0.1 5,303,026 + +0.5 5,303,026 + -0.0 5,303,026 + +0.6 5,303,026 + +0.5 5,303,026 + -0.0 5,303,027 - +0.2 5,303,027 - -0.0 5,303,027 - -1.1 5,303,027 - +0.6 5,303,027 - +0.1 5,303,027 - -0.6 5,303,028 + +1.5 5,303,028 + -0.5 5,303,028 + -0.8 5,303,028 + -0.7 5,303,029 - +1.5 5,303,029 - +1.8 5,303,029 - -1.6 5,303,029 - +0.9 5,303,029 - +0.5 5,303,324 + PFLU_RS23650 0.59 -0.3 5,303,324 + PFLU_RS23650 0.59 -0.3 5,303,324 + PFLU_RS23650 0.59 +0.9 5,303,324 + PFLU_RS23650 0.59 -0.8 5,303,324 + PFLU_RS23650 0.59 +1.8 5,303,325 - PFLU_RS23650 0.60 +0.0 5,303,325 - PFLU_RS23650 0.60 -0.3 5,303,325 - PFLU_RS23650 0.60 +0.1 5,303,325 - PFLU_RS23650 0.60 +0.5 5,303,325 - PFLU_RS23650 0.60 -1.0 5,303,325 - PFLU_RS23650 0.60 -2.3 5,303,325 - PFLU_RS23650 0.60 -0.0 5,303,364 + PFLU_RS23650 0.68 +0.8 5,303,364 + PFLU_RS23650 0.68 +1.2 5,303,364 + PFLU_RS23650 0.68 -0.6 5,303,364 + PFLU_RS23650 0.68 -0.6 5,303,364 + PFLU_RS23650 0.68 -0.6 5,303,364 + PFLU_RS23650 0.68 -0.3 5,303,364 + PFLU_RS23650 0.68 +1.2 5,303,364 + PFLU_RS23650 0.68 -0.4 5,303,364 + PFLU_RS23650 0.68 -0.1 5,303,364 + PFLU_RS23650 0.68 +0.9 5,303,365 - PFLU_RS23650 0.69 -0.9 5,303,365 - PFLU_RS23650 0.69 +0.1 5,303,365 - PFLU_RS23650 0.69 -0.1 5,303,365 - PFLU_RS23650 0.69 -0.8 5,303,365 - PFLU_RS23650 0.69 -2.3 5,303,365 - PFLU_RS23650 0.69 +0.4 5,303,430 + PFLU_RS23650 0.84 -2.1 5,303,430 + PFLU_RS23650 0.84 +0.5 5,303,431 - PFLU_RS23650 0.84 +1.8 5,303,464 + +0.2 5,303,464 + -1.0 5,303,464 + -1.6 5,303,464 + -2.0 5,303,464 + +0.5 5,303,464 + +0.9 5,303,465 - +0.6 5,303,465 - -1.4 5,303,465 - -0.1 5,303,465 - +0.5 5,303,465 - -0.9 5,303,465 - -1.6 5,303,465 - +0.4 5,303,465 - -1.6 5,303,510 + -1.3 5,303,510 + -1.2 5,303,510 + -1.6 5,303,510 + -0.9 5,303,511 - -1.4 5,303,524 + +0.3 5,303,524 + +1.6 5,303,549 + +1.3 5,303,549 + +0.1 5,303,550 - -1.8 5,303,550 - +1.1 5,303,793 - PFLU_RS23655 0.28 +0.9 5,303,834 + PFLU_RS23655 0.33 -0.2 5,303,834 + PFLU_RS23655 0.33 +1.2 5,303,834 + PFLU_RS23655 0.33 -0.3 5,303,834 + PFLU_RS23655 0.33 -0.3 5,303,834 + PFLU_RS23655 0.33 +0.4 5,303,834 + PFLU_RS23655 0.33 -0.6 5,303,834 + PFLU_RS23655 0.33 +1.2 5,303,835 - PFLU_RS23655 0.33 +0.1 5,303,835 - PFLU_RS23655 0.33 -1.7 5,303,835 - PFLU_RS23655 0.33 +1.1 5,303,835 - PFLU_RS23655 0.33 +0.2 5,303,835 - PFLU_RS23655 0.33 -0.3 5,303,835 - PFLU_RS23655 0.33 +2.4 5,303,835 - PFLU_RS23655 0.33 -2.0 5,303,870 + PFLU_RS23655 0.38 -0.4 5,303,871 - PFLU_RS23655 0.38 +0.0 5,303,871 - PFLU_RS23655 0.38 -0.4 5,303,871 - PFLU_RS23655 0.38 +0.6 5,304,014 - PFLU_RS23655 0.55 +0.0 5,304,022 + PFLU_RS23655 0.56 -1.0 5,304,023 - PFLU_RS23655 0.56 +0.1 5,304,023 - PFLU_RS23655 0.56 -2.1 5,304,023 - PFLU_RS23655 0.56 +0.7 5,304,023 - PFLU_RS23655 0.56 +0.8 5,304,023 - PFLU_RS23655 0.56 +1.1 5,304,068 + PFLU_RS23655 0.62 +0.5 5,304,068 + PFLU_RS23655 0.62 -0.0 5,304,068 + PFLU_RS23655 0.62 +0.5 5,304,068 + PFLU_RS23655 0.62 +0.7 5,304,069 - PFLU_RS23655 0.62 -0.5 5,304,069 - PFLU_RS23655 0.62 -0.0 5,304,069 - PFLU_RS23655 0.62 -1.3 5,304,069 - PFLU_RS23655 0.62 +0.3 5,304,069 - PFLU_RS23655 0.62 -0.5 5,304,069 - PFLU_RS23655 0.62 +0.5 5,304,069 - PFLU_RS23655 0.62 +0.9 5,304,069 - PFLU_RS23655 0.62 -2.5 5,304,320 + +0.9 5,304,320 + +0.7 5,304,320 + -0.0 5,304,320 + -1.1 5,304,320 + +0.5 5,304,320 + +0.4 5,304,320 + -0.9 5,304,320 + -2.1 5,304,320 + +1.8 5,304,320 + -0.6 5,304,320 + -0.9 5,304,320 + -0.1 5,304,320 + +0.1 5,304,320 + +0.1 5,304,320 + +1.4 5,304,320 + -0.0 5,304,320 + -2.0 5,304,320 + -0.2 5,304,320 + -1.7 5,304,320 + +1.0 5,304,321 - +1.5 5,304,321 - +0.6 5,304,321 - +0.4 5,304,321 - +0.4 5,304,321 - -1.6 5,304,321 - -0.1 5,304,321 - +0.8 5,304,321 - +1.0 5,304,321 - +1.3 5,304,321 - +1.1 5,304,321 - -2.1 5,304,321 - -0.8 5,304,321 - +0.6 5,304,321 - +0.6 5,304,321 - -0.8 5,304,321 - -0.5 5,304,321 - +0.2 5,304,377 + +1.2 5,304,377 + +1.5 5,304,377 + +1.5 5,304,378 - -1.6 5,304,378 - -0.3 5,304,378 - +0.4 5,304,378 - -0.5
Or see this region's nucleotide sequence