Experiment: L-Arabinose (C); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS21155 and PFLU_RS21160 are separated by 187 nucleotides PFLU_RS21160 and PFLU_RS21165 are separated by 6 nucleotides PFLU_RS21165 and PFLU_RS21170 are separated by 193 nucleotides
PFLU_RS21155: PFLU_RS21155 - rhodanese-related sulfurtransferase, at 4,755,295 to 4,756,236
_RS21155
PFLU_RS21160: PFLU_RS21160 - BolA family transcriptional regulator, at 4,756,424 to 4,756,717
_RS21160
PFLU_RS21165: PFLU_RS21165 - DUF2059 domain-containing protein, at 4,756,724 to 4,757,242
_RS21165
PFLU_RS21170: PFLU_RS21170 - class II fumarate hydratase, at 4,757,436 to 4,758,818
_RS21170
Position (kb) 4756
4757 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4755.452 kb on + strand, within PFLU_RS21155 at 4755.452 kb on + strand, within PFLU_RS21155 at 4755.452 kb on + strand, within PFLU_RS21155 at 4755.452 kb on + strand, within PFLU_RS21155 at 4755.453 kb on - strand, within PFLU_RS21155 at 4755.453 kb on - strand, within PFLU_RS21155 at 4755.453 kb on - strand, within PFLU_RS21155 at 4755.453 kb on - strand, within PFLU_RS21155 at 4755.512 kb on + strand, within PFLU_RS21155 at 4755.512 kb on + strand, within PFLU_RS21155 at 4755.513 kb on - strand, within PFLU_RS21155 at 4755.539 kb on - strand, within PFLU_RS21155 at 4755.539 kb on - strand, within PFLU_RS21155 at 4755.611 kb on + strand, within PFLU_RS21155 at 4755.611 kb on + strand, within PFLU_RS21155 at 4755.612 kb on - strand, within PFLU_RS21155 at 4755.612 kb on - strand, within PFLU_RS21155 at 4755.612 kb on - strand, within PFLU_RS21155 at 4755.638 kb on + strand, within PFLU_RS21155 at 4755.638 kb on + strand, within PFLU_RS21155 at 4755.638 kb on + strand, within PFLU_RS21155 at 4755.639 kb on - strand, within PFLU_RS21155 at 4755.668 kb on + strand, within PFLU_RS21155 at 4755.668 kb on + strand, within PFLU_RS21155 at 4755.668 kb on + strand, within PFLU_RS21155 at 4755.668 kb on + strand, within PFLU_RS21155 at 4755.668 kb on + strand, within PFLU_RS21155 at 4755.668 kb on + strand, within PFLU_RS21155 at 4755.669 kb on - strand, within PFLU_RS21155 at 4755.669 kb on - strand, within PFLU_RS21155 at 4755.669 kb on - strand, within PFLU_RS21155 at 4755.669 kb on - strand, within PFLU_RS21155 at 4755.669 kb on - strand, within PFLU_RS21155 at 4755.723 kb on + strand, within PFLU_RS21155 at 4755.723 kb on + strand, within PFLU_RS21155 at 4755.723 kb on + strand, within PFLU_RS21155 at 4755.827 kb on + strand, within PFLU_RS21155 at 4755.828 kb on - strand, within PFLU_RS21155 at 4755.899 kb on + strand, within PFLU_RS21155 at 4755.899 kb on + strand, within PFLU_RS21155 at 4755.899 kb on + strand, within PFLU_RS21155 at 4755.899 kb on + strand, within PFLU_RS21155 at 4755.899 kb on + strand, within PFLU_RS21155 at 4755.899 kb on + strand, within PFLU_RS21155 at 4755.899 kb on + strand, within PFLU_RS21155 at 4755.899 kb on + strand, within PFLU_RS21155 at 4755.900 kb on - strand, within PFLU_RS21155 at 4755.900 kb on - strand, within PFLU_RS21155 at 4755.900 kb on - strand, within PFLU_RS21155 at 4755.900 kb on - strand, within PFLU_RS21155 at 4755.900 kb on - strand, within PFLU_RS21155 at 4755.900 kb on - strand, within PFLU_RS21155 at 4756.002 kb on - strand, within PFLU_RS21155 at 4756.012 kb on - strand, within PFLU_RS21155 at 4756.181 kb on + strand at 4756.203 kb on + strand at 4756.203 kb on + strand at 4756.203 kb on + strand at 4756.203 kb on + strand at 4756.203 kb on + strand at 4756.203 kb on + strand at 4756.203 kb on + strand at 4756.203 kb on + strand at 4756.203 kb on + strand at 4756.203 kb on + strand at 4756.204 kb on - strand at 4756.204 kb on - strand at 4756.204 kb on - strand at 4756.204 kb on - strand at 4756.204 kb on - strand at 4756.204 kb on - strand at 4756.204 kb on - strand at 4756.204 kb on - strand at 4756.205 kb on + strand at 4756.205 kb on + strand at 4756.205 kb on + strand at 4756.206 kb on - strand at 4756.206 kb on - strand at 4756.206 kb on - strand at 4756.206 kb on - strand at 4756.206 kb on - strand at 4756.206 kb on - strand at 4756.266 kb on - strand at 4756.266 kb on - strand at 4756.322 kb on + strand at 4756.323 kb on - strand at 4756.405 kb on + strand at 4756.405 kb on + strand at 4756.405 kb on + strand at 4756.406 kb on - strand at 4756.406 kb on - strand at 4756.406 kb on - strand at 4756.406 kb on - strand at 4756.491 kb on + strand, within PFLU_RS21160 at 4756.491 kb on + strand, within PFLU_RS21160 at 4756.491 kb on + strand, within PFLU_RS21160 at 4756.491 kb on + strand, within PFLU_RS21160 at 4756.491 kb on + strand, within PFLU_RS21160 at 4756.491 kb on + strand, within PFLU_RS21160 at 4756.492 kb on - strand, within PFLU_RS21160 at 4756.492 kb on - strand, within PFLU_RS21160 at 4756.492 kb on - strand, within PFLU_RS21160 at 4756.492 kb on - strand, within PFLU_RS21160 at 4756.492 kb on - strand, within PFLU_RS21160 at 4756.492 kb on - strand, within PFLU_RS21160 at 4756.492 kb on - strand, within PFLU_RS21160 at 4756.492 kb on - strand, within PFLU_RS21160 at 4756.492 kb on - strand, within PFLU_RS21160 at 4756.495 kb on + strand, within PFLU_RS21160 at 4756.495 kb on + strand, within PFLU_RS21160 at 4756.495 kb on + strand, within PFLU_RS21160 at 4756.496 kb on - strand, within PFLU_RS21160 at 4756.496 kb on - strand, within PFLU_RS21160 at 4756.496 kb on - strand, within PFLU_RS21160 at 4756.496 kb on - strand, within PFLU_RS21160 at 4756.496 kb on - strand, within PFLU_RS21160 at 4756.545 kb on + strand, within PFLU_RS21160 at 4756.545 kb on + strand, within PFLU_RS21160 at 4756.546 kb on - strand, within PFLU_RS21160 at 4756.639 kb on + strand, within PFLU_RS21160 at 4756.639 kb on + strand, within PFLU_RS21160 at 4756.725 kb on + strand at 4756.725 kb on + strand at 4756.725 kb on + strand at 4756.725 kb on + strand at 4756.725 kb on + strand at 4756.726 kb on - strand at 4756.726 kb on - strand at 4756.726 kb on - strand at 4756.726 kb on - strand at 4756.726 kb on - strand at 4756.896 kb on + strand, within PFLU_RS21165 at 4756.896 kb on + strand, within PFLU_RS21165 at 4756.896 kb on + strand, within PFLU_RS21165 at 4756.896 kb on + strand, within PFLU_RS21165 at 4756.897 kb on - strand, within PFLU_RS21165 at 4756.897 kb on - strand, within PFLU_RS21165 at 4756.944 kb on + strand, within PFLU_RS21165 at 4756.944 kb on + strand, within PFLU_RS21165 at 4756.944 kb on + strand, within PFLU_RS21165 at 4756.944 kb on + strand, within PFLU_RS21165 at 4756.945 kb on - strand, within PFLU_RS21165 at 4757.019 kb on + strand, within PFLU_RS21165 at 4757.019 kb on + strand, within PFLU_RS21165 at 4757.019 kb on + strand, within PFLU_RS21165 at 4757.019 kb on + strand, within PFLU_RS21165 at 4757.020 kb on - strand, within PFLU_RS21165 at 4757.020 kb on - strand, within PFLU_RS21165 at 4757.100 kb on + strand, within PFLU_RS21165 at 4757.100 kb on + strand, within PFLU_RS21165 at 4757.100 kb on + strand, within PFLU_RS21165 at 4757.100 kb on + strand, within PFLU_RS21165 at 4757.100 kb on + strand, within PFLU_RS21165 at 4757.100 kb on + strand, within PFLU_RS21165 at 4757.100 kb on + strand, within PFLU_RS21165 at 4757.100 kb on + strand, within PFLU_RS21165 at 4757.100 kb on + strand, within PFLU_RS21165 at 4757.100 kb on + strand, within PFLU_RS21165 at 4757.100 kb on + strand, within PFLU_RS21165 at 4757.100 kb on + strand, within PFLU_RS21165 at 4757.100 kb on + strand, within PFLU_RS21165 at 4757.100 kb on + strand, within PFLU_RS21165 at 4757.101 kb on - strand, within PFLU_RS21165 at 4757.101 kb on - strand, within PFLU_RS21165 at 4757.101 kb on - strand, within PFLU_RS21165 at 4757.101 kb on - strand, within PFLU_RS21165 at 4757.101 kb on - strand, within PFLU_RS21165 at 4757.101 kb on - strand, within PFLU_RS21165 at 4757.101 kb on - strand, within PFLU_RS21165 at 4757.101 kb on - strand, within PFLU_RS21165 at 4757.101 kb on - strand, within PFLU_RS21165 at 4757.101 kb on - strand, within PFLU_RS21165 at 4757.101 kb on - strand, within PFLU_RS21165 at 4757.101 kb on - strand, within PFLU_RS21165 at 4757.101 kb on - strand, within PFLU_RS21165 at 4757.101 kb on - strand, within PFLU_RS21165 at 4757.101 kb on - strand, within PFLU_RS21165 at 4757.101 kb on - strand, within PFLU_RS21165 at 4757.101 kb on - strand, within PFLU_RS21165 at 4757.101 kb on - strand, within PFLU_RS21165 at 4757.101 kb on - strand, within PFLU_RS21165 at 4757.257 kb on + strand at 4757.257 kb on + strand at 4757.258 kb on - strand at 4757.269 kb on + strand at 4757.269 kb on + strand at 4757.269 kb on + strand at 4757.270 kb on - strand at 4757.330 kb on + strand at 4757.330 kb on + strand at 4757.330 kb on + strand at 4757.330 kb on + strand at 4757.331 kb on - strand at 4757.331 kb on - strand at 4757.331 kb on - strand at 4757.372 kb on + strand at 4757.401 kb on + strand at 4757.402 kb on - strand at 4757.491 kb on - strand at 4757.561 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose (C); with MOPS remove 4,755,452 + PFLU_RS21155 0.17 -1.1 4,755,452 + PFLU_RS21155 0.17 +0.7 4,755,452 + PFLU_RS21155 0.17 -0.6 4,755,452 + PFLU_RS21155 0.17 -1.4 4,755,453 - PFLU_RS21155 0.17 -1.1 4,755,453 - PFLU_RS21155 0.17 +1.2 4,755,453 - PFLU_RS21155 0.17 -0.6 4,755,453 - PFLU_RS21155 0.17 -1.0 4,755,512 + PFLU_RS21155 0.23 +0.2 4,755,512 + PFLU_RS21155 0.23 +1.9 4,755,513 - PFLU_RS21155 0.23 -2.5 4,755,539 - PFLU_RS21155 0.26 +2.1 4,755,539 - PFLU_RS21155 0.26 -0.1 4,755,611 + PFLU_RS21155 0.34 -0.1 4,755,611 + PFLU_RS21155 0.34 +1.0 4,755,612 - PFLU_RS21155 0.34 +0.7 4,755,612 - PFLU_RS21155 0.34 -2.9 4,755,612 - PFLU_RS21155 0.34 -1.4 4,755,638 + PFLU_RS21155 0.36 -1.2 4,755,638 + PFLU_RS21155 0.36 -1.7 4,755,638 + PFLU_RS21155 0.36 +0.2 4,755,639 - PFLU_RS21155 0.37 +0.2 4,755,668 + PFLU_RS21155 0.40 -0.6 4,755,668 + PFLU_RS21155 0.40 +0.1 4,755,668 + PFLU_RS21155 0.40 -1.5 4,755,668 + PFLU_RS21155 0.40 -0.2 4,755,668 + PFLU_RS21155 0.40 +0.7 4,755,668 + PFLU_RS21155 0.40 -1.4 4,755,669 - PFLU_RS21155 0.40 +0.2 4,755,669 - PFLU_RS21155 0.40 -1.4 4,755,669 - PFLU_RS21155 0.40 -1.8 4,755,669 - PFLU_RS21155 0.40 -0.4 4,755,669 - PFLU_RS21155 0.40 +0.0 4,755,723 + PFLU_RS21155 0.45 +1.8 4,755,723 + PFLU_RS21155 0.45 -1.0 4,755,723 + PFLU_RS21155 0.45 +0.3 4,755,827 + PFLU_RS21155 0.56 -0.5 4,755,828 - PFLU_RS21155 0.57 -0.5 4,755,899 + PFLU_RS21155 0.64 +0.9 4,755,899 + PFLU_RS21155 0.64 +0.2 4,755,899 + PFLU_RS21155 0.64 +1.9 4,755,899 + PFLU_RS21155 0.64 +0.2 4,755,899 + PFLU_RS21155 0.64 +0.0 4,755,899 + PFLU_RS21155 0.64 +0.1 4,755,899 + PFLU_RS21155 0.64 -1.4 4,755,899 + PFLU_RS21155 0.64 -2.1 4,755,900 - PFLU_RS21155 0.64 -2.2 4,755,900 - PFLU_RS21155 0.64 +0.9 4,755,900 - PFLU_RS21155 0.64 -3.0 4,755,900 - PFLU_RS21155 0.64 +1.3 4,755,900 - PFLU_RS21155 0.64 -0.7 4,755,900 - PFLU_RS21155 0.64 +0.0 4,756,002 - PFLU_RS21155 0.75 +0.7 4,756,012 - PFLU_RS21155 0.76 -2.2 4,756,181 + -0.7 4,756,203 + -0.2 4,756,203 + +1.4 4,756,203 + +0.4 4,756,203 + +1.0 4,756,203 + -0.4 4,756,203 + +0.0 4,756,203 + +0.7 4,756,203 + +2.1 4,756,203 + -0.4 4,756,203 + +0.0 4,756,204 - +0.3 4,756,204 - -1.9 4,756,204 - -0.3 4,756,204 - +0.0 4,756,204 - +0.7 4,756,204 - -1.2 4,756,204 - -1.3 4,756,204 - -2.4 4,756,205 + +0.9 4,756,205 + +0.6 4,756,205 + +0.6 4,756,206 - -1.1 4,756,206 - +0.3 4,756,206 - +0.5 4,756,206 - -1.4 4,756,206 - +0.0 4,756,206 - -3.4 4,756,266 - +1.2 4,756,266 - -0.6 4,756,322 + -1.8 4,756,323 - -1.0 4,756,405 + +0.6 4,756,405 + -0.2 4,756,405 + +0.3 4,756,406 - +1.2 4,756,406 - -0.2 4,756,406 - +0.7 4,756,406 - -1.3 4,756,491 + PFLU_RS21160 0.23 -1.4 4,756,491 + PFLU_RS21160 0.23 -1.0 4,756,491 + PFLU_RS21160 0.23 -2.6 4,756,491 + PFLU_RS21160 0.23 -0.9 4,756,491 + PFLU_RS21160 0.23 -2.6 4,756,491 + PFLU_RS21160 0.23 +1.6 4,756,492 - PFLU_RS21160 0.23 -0.7 4,756,492 - PFLU_RS21160 0.23 +0.2 4,756,492 - PFLU_RS21160 0.23 -1.2 4,756,492 - PFLU_RS21160 0.23 -1.0 4,756,492 - PFLU_RS21160 0.23 -2.1 4,756,492 - PFLU_RS21160 0.23 -2.8 4,756,492 - PFLU_RS21160 0.23 -3.4 4,756,492 - PFLU_RS21160 0.23 +1.3 4,756,492 - PFLU_RS21160 0.23 -0.1 4,756,495 + PFLU_RS21160 0.24 -1.3 4,756,495 + PFLU_RS21160 0.24 -3.1 4,756,495 + PFLU_RS21160 0.24 -1.4 4,756,496 - PFLU_RS21160 0.24 -0.7 4,756,496 - PFLU_RS21160 0.24 -0.3 4,756,496 - PFLU_RS21160 0.24 -1.9 4,756,496 - PFLU_RS21160 0.24 -1.5 4,756,496 - PFLU_RS21160 0.24 +0.1 4,756,545 + PFLU_RS21160 0.41 -0.2 4,756,545 + PFLU_RS21160 0.41 -1.7 4,756,546 - PFLU_RS21160 0.41 -1.0 4,756,639 + PFLU_RS21160 0.73 -2.3 4,756,639 + PFLU_RS21160 0.73 -0.2 4,756,725 + -0.3 4,756,725 + +0.4 4,756,725 + +0.9 4,756,725 + -2.1 4,756,725 + -0.2 4,756,726 - -0.2 4,756,726 - -0.9 4,756,726 - +0.8 4,756,726 - +0.4 4,756,726 - -0.3 4,756,896 + PFLU_RS21165 0.33 -2.6 4,756,896 + PFLU_RS21165 0.33 -2.8 4,756,896 + PFLU_RS21165 0.33 -0.0 4,756,896 + PFLU_RS21165 0.33 -0.2 4,756,897 - PFLU_RS21165 0.33 +1.3 4,756,897 - PFLU_RS21165 0.33 +1.0 4,756,944 + PFLU_RS21165 0.42 -0.4 4,756,944 + PFLU_RS21165 0.42 +0.0 4,756,944 + PFLU_RS21165 0.42 -0.6 4,756,944 + PFLU_RS21165 0.42 -1.0 4,756,945 - PFLU_RS21165 0.43 +0.5 4,757,019 + PFLU_RS21165 0.57 -2.4 4,757,019 + PFLU_RS21165 0.57 -1.6 4,757,019 + PFLU_RS21165 0.57 -1.7 4,757,019 + PFLU_RS21165 0.57 -2.5 4,757,020 - PFLU_RS21165 0.57 -0.4 4,757,020 - PFLU_RS21165 0.57 -0.1 4,757,100 + PFLU_RS21165 0.72 +0.3 4,757,100 + PFLU_RS21165 0.72 +0.5 4,757,100 + PFLU_RS21165 0.72 +0.0 4,757,100 + PFLU_RS21165 0.72 +0.2 4,757,100 + PFLU_RS21165 0.72 +0.9 4,757,100 + PFLU_RS21165 0.72 -0.1 4,757,100 + PFLU_RS21165 0.72 -1.0 4,757,100 + PFLU_RS21165 0.72 -1.0 4,757,100 + PFLU_RS21165 0.72 -3.4 4,757,100 + PFLU_RS21165 0.72 -1.2 4,757,100 + PFLU_RS21165 0.72 -0.4 4,757,100 + PFLU_RS21165 0.72 -1.4 4,757,100 + PFLU_RS21165 0.72 -2.1 4,757,100 + PFLU_RS21165 0.72 +0.1 4,757,101 - PFLU_RS21165 0.73 -0.4 4,757,101 - PFLU_RS21165 0.73 +1.7 4,757,101 - PFLU_RS21165 0.73 -3.4 4,757,101 - PFLU_RS21165 0.73 -3.0 4,757,101 - PFLU_RS21165 0.73 -0.4 4,757,101 - PFLU_RS21165 0.73 +0.5 4,757,101 - PFLU_RS21165 0.73 -0.9 4,757,101 - PFLU_RS21165 0.73 -0.6 4,757,101 - PFLU_RS21165 0.73 -0.4 4,757,101 - PFLU_RS21165 0.73 +0.0 4,757,101 - PFLU_RS21165 0.73 +1.3 4,757,101 - PFLU_RS21165 0.73 -2.5 4,757,101 - PFLU_RS21165 0.73 -1.9 4,757,101 - PFLU_RS21165 0.73 +0.5 4,757,101 - PFLU_RS21165 0.73 -0.6 4,757,101 - PFLU_RS21165 0.73 -1.5 4,757,101 - PFLU_RS21165 0.73 +0.0 4,757,101 - PFLU_RS21165 0.73 -0.4 4,757,101 - PFLU_RS21165 0.73 -0.1 4,757,257 + -1.3 4,757,257 + -1.5 4,757,258 - +0.3 4,757,269 + -1.9 4,757,269 + +0.3 4,757,269 + -1.7 4,757,270 - +0.9 4,757,330 + +0.9 4,757,330 + -0.4 4,757,330 + -0.2 4,757,330 + +1.2 4,757,331 - -0.3 4,757,331 - +1.3 4,757,331 - +0.6 4,757,372 + -2.5 4,757,401 + -3.1 4,757,402 - -1.2 4,757,491 - -1.0 4,757,561 - -0.4
Or see this region's nucleotide sequence