Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS08410

Experiment: L-Arabinose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C); with MOPS
1,876,844	+		PFLU_RS08400	0.81	-0.1
1,876,844	+		PFLU_RS08400	0.81	-0.1
1,876,844	+		PFLU_RS08400	0.81	+1.8
1,876,844	+		PFLU_RS08400	0.81	+0.3
1,876,844	+		PFLU_RS08400	0.81	-1.3
1,876,845	-		PFLU_RS08400	0.81	+1.6
1,876,846	+		PFLU_RS08400	0.81	+1.8
1,876,846	+		PFLU_RS08400	0.81	-0.4
1,876,846	+		PFLU_RS08400	0.81	+1.1
1,876,846	+		PFLU_RS08400	0.81	-1.0
1,876,846	+		PFLU_RS08400	0.81	+0.6
1,876,846	+		PFLU_RS08400	0.81	-3.3
1,876,846	+		PFLU_RS08400	0.81	+0.8
1,876,846	+		PFLU_RS08400	0.81	+0.9
1,876,846	+		PFLU_RS08400	0.81	+0.6
1,876,846	+		PFLU_RS08400	0.81	+1.4
1,876,846	+		PFLU_RS08400	0.81	-0.2
1,876,846	+		PFLU_RS08400	0.81	-0.1
1,876,846	+		PFLU_RS08400	0.81	+2.0
1,876,846	+		PFLU_RS08400	0.81	+0.6
1,876,846	+		PFLU_RS08400	0.81	+1.9
1,876,846	+		PFLU_RS08400	0.81	+0.2
1,876,846	+		PFLU_RS08400	0.81	+0.8
1,876,846	+		PFLU_RS08400	0.81	-0.2
1,876,846	+		PFLU_RS08400	0.81	+1.1
1,876,846	+		PFLU_RS08400	0.81	-0.9
1,876,846	+		PFLU_RS08400	0.81	-0.4
1,876,846	+		PFLU_RS08400	0.81	-0.3
1,876,847	-		PFLU_RS08400	0.81	+0.8
1,876,847	-		PFLU_RS08400	0.81	+0.8
1,876,847	-		PFLU_RS08400	0.81	+0.8
1,876,847	-		PFLU_RS08400	0.81	-2.0
1,876,847	-		PFLU_RS08400	0.81	+0.8
1,876,847	-		PFLU_RS08400	0.81	+0.9
1,876,847	-		PFLU_RS08400	0.81	+0.7
1,876,847	-		PFLU_RS08400	0.81	+0.7
1,876,847	-		PFLU_RS08400	0.81	+1.0
1,876,847	-		PFLU_RS08400	0.81	+1.2
1,876,847	-		PFLU_RS08400	0.81	+1.2
1,876,847	-		PFLU_RS08400	0.81	+2.2
1,876,847	-		PFLU_RS08400	0.81	-0.6
1,876,847	-		PFLU_RS08400	0.81	+0.9
1,876,847	-		PFLU_RS08400	0.81	-0.5
1,876,847	-		PFLU_RS08400	0.81	+1.5
1,876,847	-		PFLU_RS08400	0.81	+0.0
1,876,847	-		PFLU_RS08400	0.81	+1.5
1,876,981	+				+0.5
1,876,981	+				+1.9
1,876,981	+				-2.6
1,876,981	+				-0.8
1,876,981	+				+0.2
1,876,982	-				+1.7
1,876,982	-				+0.9
1,876,982	-				+1.2
1,876,982	-				-1.2
1,876,997	+				-1.7
1,876,998	-				-2.5
1,877,013	+				+0.3
1,877,014	-				+1.3
1,877,014	-				+1.4
1,877,014	-				-0.1
1,877,014	-				+0.5
1,877,043	-				+0.1
1,877,043	-				+2.2
1,877,043	-				-0.7
1,877,085	+				-0.1
1,877,085	+				+0.1
1,877,085	+				-0.4
1,877,085	+				-0.7
1,877,085	+				-1.6
1,877,085	+				-0.5
1,877,085	+				-0.1
1,877,085	+				-1.2
1,877,085	+				+0.9
1,877,085	+				-3.2
1,877,085	+				-1.5
1,877,086	-				+1.9
1,877,086	-				-0.4
1,877,086	-				-0.0
1,877,086	-				-2.6
1,877,086	-				+1.1
1,877,104	+				+0.1
1,877,104	+				+0.5
1,877,104	+				-1.1
1,877,105	-				+1.3
1,877,125	+				-0.9
1,877,125	+				-0.7
1,877,126	-				+1.3
1,877,134	+				-1.2
1,877,134	+				-1.2
1,877,134	+				+1.2
1,877,134	+				+0.4
1,877,134	+				+0.2
1,877,135	-				-1.7
1,877,135	-				-1.9
1,877,135	-				+0.6
1,877,185	+		PFLU_RS08405	0.20	+1.3
1,877,185	+		PFLU_RS08405	0.20	-1.1
1,877,185	+		PFLU_RS08405	0.20	+0.2
1,877,185	+		PFLU_RS08405	0.20	-2.1
1,877,185	+		PFLU_RS08405	0.20	-0.7
1,877,185	+		PFLU_RS08405	0.20	+0.9
1,877,185	+		PFLU_RS08405	0.20	+0.5
1,877,185	+		PFLU_RS08405	0.20	+0.2
1,877,186	-		PFLU_RS08405	0.20	-0.4
1,877,186	-		PFLU_RS08405	0.20	+0.1
1,877,186	-		PFLU_RS08405	0.20	+1.2
1,877,186	-		PFLU_RS08405	0.20	-0.2
1,877,186	-		PFLU_RS08405	0.20	+0.3
1,877,242	+		PFLU_RS08405	0.31	+1.1
1,877,242	+		PFLU_RS08405	0.31	-1.1
1,877,242	+		PFLU_RS08405	0.31	+0.1
1,877,243	-		PFLU_RS08405	0.31	-0.6
1,877,243	-		PFLU_RS08405	0.31	+0.2
1,877,243	-		PFLU_RS08405	0.31	+0.6
1,877,243	-		PFLU_RS08405	0.31	-0.5
1,877,243	-		PFLU_RS08405	0.31	+0.9
1,877,243	-		PFLU_RS08405	0.31	-1.4
1,877,243	-		PFLU_RS08405	0.31	-0.1
1,877,243	-		PFLU_RS08405	0.31	+0.6
1,877,414	+		PFLU_RS08405	0.65	+0.8
1,877,414	+		PFLU_RS08405	0.65	+1.0
1,877,414	+		PFLU_RS08405	0.65	+0.5
1,877,414	+		PFLU_RS08405	0.65	-1.5
1,877,430	+		PFLU_RS08405	0.69	-2.7
1,877,430	+		PFLU_RS08405	0.69	-0.4
1,877,457	-		PFLU_RS08405	0.74	+1.7
1,877,466	+		PFLU_RS08405	0.76	+0.8
1,877,466	+		PFLU_RS08405	0.76	-1.8
1,877,466	+		PFLU_RS08405	0.76	-0.3
1,877,466	+		PFLU_RS08405	0.76	+0.4
1,877,467	-		PFLU_RS08405	0.76	-1.8
1,877,467	-		PFLU_RS08405	0.76	-1.5
1,877,487	+		PFLU_RS08405	0.80	-0.4
1,877,529	+		PFLU_RS08405	0.88	-0.9
1,877,529	+		PFLU_RS08405	0.88	+0.5
1,877,530	-		PFLU_RS08405	0.89	-0.3
1,877,530	-		PFLU_RS08405	0.89	+0.6
1,877,636	+				-0.7
1,877,636	+				-0.4
1,877,640	+				+0.4
1,877,640	+				-1.5
1,877,641	-				+1.3
1,877,641	-				+0.5
1,877,641	-				+1.6
1,877,642	+				+0.7
1,877,643	-				-0.2
1,877,657	-				+1.8
1,877,669	+				-1.0
1,877,670	-				-1.4
1,877,689	+				-1.6
1,877,689	+				-1.6
1,877,689	+				+0.8
1,877,689	+				-1.9
1,877,689	+				-0.9
1,877,689	+				-0.2
1,877,689	+				-2.3
1,877,689	+				-1.8
1,877,689	+				-2.1
1,877,689	+				-2.2
1,877,689	+				+2.2
1,877,689	+				-2.1
1,877,689	+				-2.1
1,877,689	+				-0.3
1,877,689	+				-1.2
1,877,689	+				-2.2
1,877,689	+				-0.7
1,877,689	+				+1.3
1,877,689	+				-0.7
1,877,689	+				-2.6
1,877,689	+				-0.7
1,877,689	+				-1.2
1,877,689	+				-0.4
1,877,689	+				-1.5
1,877,689	+				-0.2
1,877,689	+				+0.1
1,877,689	+				-0.4
1,877,689	+				+0.5
1,877,689	+				-2.4
1,877,689	+				+0.2
1,877,689	+				-2.1
1,877,689	+				-3.2
1,877,689	+				-1.4
1,877,689	+				-0.4
1,877,690	-				-0.2
1,877,690	-				-0.7
1,877,690	-				-0.4
1,877,690	-				-0.9
1,877,690	-				+0.6
1,877,690	-				-0.4
1,877,690	-				-1.9
1,877,690	-				-0.4
1,877,690	-				-1.5
1,877,690	-				+0.6
1,877,690	-				-2.2
1,877,690	-				+0.6
1,877,690	-				-1.9
1,877,690	-				-0.4
1,877,690	-				-1.2
1,877,690	-				-1.7
1,877,690	-				-1.4
1,877,690	-				-2.7
1,877,690	-				-1.2
1,877,690	-				-1.7
1,877,690	-				-1.9
1,877,690	-				-1.8
1,877,690	-				-0.5
1,877,690	-				-2.9
1,877,690	-				-1.5
1,877,690	-				-0.7
1,877,690	-				-0.9
1,877,690	-				-0.7
1,877,690	-				-1.2
1,877,690	-				-0.9
1,877,690	-				+0.6
1,877,690	-				-1.7
1,877,690	-				-0.2
1,877,690	-				-0.4
1,877,690	-				-0.9
1,877,690	-				-1.4
1,877,690	-				-2.8
1,877,690	-				-0.1
1,877,711	+				-0.5
1,877,711	+				-2.4
1,877,711	+				+0.1
1,877,712	-				-1.7
1,877,712	-				-1.4
1,877,712	-				+1.1
1,877,768	+				-1.8
1,877,768	+				+0.2
1,877,769	-				-1.5
1,877,769	-				-2.6
1,877,769	-				-0.7
1,877,769	-				-1.9
1,878,044	+		PFLU_RS08410	0.36	+1.5
1,878,044	+		PFLU_RS08410	0.36	+0.6
1,878,044	+		PFLU_RS08410	0.36	+1.1
1,878,045	-		PFLU_RS08410	0.36	-1.7
1,878,278	+		PFLU_RS08410	0.60	+0.3
1,878,278	+		PFLU_RS08410	0.60	+0.9
1,878,278	+		PFLU_RS08410	0.60	-0.0
1,878,278	+		PFLU_RS08410	0.60	+0.2
1,878,278	+		PFLU_RS08410	0.60	+1.1
1,878,278	+		PFLU_RS08410	0.60	+1.2
1,878,278	+		PFLU_RS08410	0.60	+0.1
1,878,278	+		PFLU_RS08410	0.60	+0.3
1,878,278	+		PFLU_RS08410	0.60	+0.5
1,878,278	+		PFLU_RS08410	0.60	-1.6
1,878,278	+		PFLU_RS08410	0.60	-0.8
1,878,278	+		PFLU_RS08410	0.60	+0.4
1,878,278	+		PFLU_RS08410	0.60	-0.1
1,878,278	+		PFLU_RS08410	0.60	+0.1
1,878,278	+		PFLU_RS08410	0.60	+0.8
1,878,278	+		PFLU_RS08410	0.60	-2.6
1,878,278	+		PFLU_RS08410	0.60	+2.3
1,878,278	+		PFLU_RS08410	0.60	+0.6
1,878,278	+		PFLU_RS08410	0.60	+0.3
1,878,278	+		PFLU_RS08410	0.60	-0.7
1,878,278	+		PFLU_RS08410	0.60	-0.6
1,878,279	-		PFLU_RS08410	0.60	+0.6
1,878,279	-		PFLU_RS08410	0.60	-0.4
1,878,279	-		PFLU_RS08410	0.60	-0.4
1,878,279	-		PFLU_RS08410	0.60	+0.5
1,878,279	-		PFLU_RS08410	0.60	-1.2
1,878,279	-		PFLU_RS08410	0.60	+0.8
1,878,279	-		PFLU_RS08410	0.60	-0.7
1,878,279	-		PFLU_RS08410	0.60	-0.2
1,878,279	-		PFLU_RS08410	0.60	-1.4
1,878,279	-		PFLU_RS08410	0.60	+1.5
1,878,386	+		PFLU_RS08410	0.71	+0.9
1,878,386	+		PFLU_RS08410	0.71	+0.4
1,878,386	+		PFLU_RS08410	0.71	-0.6
1,878,386	+		PFLU_RS08410	0.71	+0.9
1,878,386	+		PFLU_RS08410	0.71	+0.8
1,878,386	+		PFLU_RS08410	0.71	+0.9
1,878,386	+		PFLU_RS08410	0.71	+0.8
1,878,386	+		PFLU_RS08410	0.71	+2.4
1,878,386	+		PFLU_RS08410	0.71	+0.6
1,878,386	+		PFLU_RS08410	0.71	-0.4
1,878,386	+		PFLU_RS08410	0.71	-1.3
1,878,386	+		PFLU_RS08410	0.71	+0.1
1,878,387	-		PFLU_RS08410	0.71	+0.6
1,878,645	+				+0.1
1,878,651	+				-0.7
1,878,652	-				+1.1
1,878,652	-				+0.4
1,878,699	+				-0.9
1,878,699	+				+0.2
1,878,700	-				-0.4
1,878,700	-				-1.2
1,878,717	+				-0.7
1,878,717	+				+0.5
1,878,718	-				+0.4
1,878,718	-				-0.0
1,878,718	-				-1.4
1,878,718	-				-1.4
1,878,718	-				-0.7
1,878,718	-				-2.0
1,878,718	-				-0.7
1,878,722	-				+0.2
1,878,930	-		PFLU_RS08415	0.44	-2.8
1,878,945	-		PFLU_RS08415	0.47	-0.2
1,878,963	+		PFLU_RS08415	0.51	+1.6
1,878,964	-		PFLU_RS08415	0.51	-0.6
1,878,964	-		PFLU_RS08415	0.51	-1.6
1,879,044	+		PFLU_RS08415	0.68	+0.2
1,879,044	+		PFLU_RS08415	0.68	-1.2
1,879,044	+		PFLU_RS08415	0.68	-1.4
1,879,044	+		PFLU_RS08415	0.68	+0.8
1,879,071	+		PFLU_RS08415	0.73	-2.4
1,879,071	+		PFLU_RS08415	0.73	-0.3
1,879,071	+		PFLU_RS08415	0.73	+0.2
1,879,071	+		PFLU_RS08415	0.73	+0.8
1,879,071	+		PFLU_RS08415	0.73	+0.3
1,879,071	+		PFLU_RS08415	0.73	+1.4
1,879,071	+		PFLU_RS08415	0.73	-2.0
1,879,072	-		PFLU_RS08415	0.74	+1.3
1,879,072	-		PFLU_RS08415	0.74	+1.5
1,879,088	-		PFLU_RS08415	0.77	-0.8
1,879,114	-		PFLU_RS08415	0.82	+1.3
1,879,192	+				+0.9
1,879,192	+				+0.6
1,879,193	-				-0.3
1,879,364	+		PFLU_RS08420	0.43	+1.1
1,879,364	+		PFLU_RS08420	0.43	+0.3
1,879,365	-		PFLU_RS08420	0.44	-0.8
1,879,365	-		PFLU_RS08420	0.44	-1.5
1,879,365	-		PFLU_RS08420	0.44	+0.1
1,879,377	+		PFLU_RS08420	0.47	+0.1
1,879,377	+		PFLU_RS08420	0.47	-0.9
1,879,377	+		PFLU_RS08420	0.47	-2.5
1,879,377	+		PFLU_RS08420	0.47	-2.4
1,879,378	-		PFLU_RS08420	0.47	+0.6
1,879,378	-		PFLU_RS08420	0.47	-0.9
1,879,378	-		PFLU_RS08420	0.47	+0.2
1,879,378	-		PFLU_RS08420	0.47	+0.1
1,879,378	-		PFLU_RS08420	0.47	+0.2
1,879,378	-		PFLU_RS08420	0.47	+0.8
1,879,378	-		PFLU_RS08420	0.47	-1.4
1,879,467	-		PFLU_RS08420	0.71	-0.1
1,879,516	+		PFLU_RS08420	0.85	-0.1
1,879,516	+		PFLU_RS08420	0.85	+0.6
1,879,516	+		PFLU_RS08420	0.85	+0.3
1,879,517	-		PFLU_RS08420	0.85	-0.5
1,879,517	-		PFLU_RS08420	0.85	+0.6
1,879,517	-		PFLU_RS08420	0.85	+0.2
1,879,634	+				+0.6
1,879,635	-				+0.3