Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS07430

Experiment: L-Arabinose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C); with MOPS
1,653,013	+		PFLU_RS07425	0.37	+1.2
1,653,013	+		PFLU_RS07425	0.37	+0.2
1,653,014	-		PFLU_RS07425	0.38	+0.7
1,653,253	+		PFLU_RS07425	0.64	-0.9
1,653,253	+		PFLU_RS07425	0.64	-0.2
1,653,254	-		PFLU_RS07425	0.64	+1.1
1,653,254	-		PFLU_RS07425	0.64	-0.3
1,653,254	-		PFLU_RS07425	0.64	-0.4
1,653,254	-		PFLU_RS07425	0.64	-1.0
1,653,254	-		PFLU_RS07425	0.64	+0.7
1,653,254	-		PFLU_RS07425	0.64	+0.7
1,653,394	+		PFLU_RS07425	0.79	+0.8
1,653,394	+		PFLU_RS07425	0.79	+0.5
1,653,394	+		PFLU_RS07425	0.79	+0.7
1,653,395	-		PFLU_RS07425	0.80	-0.1
1,653,395	-		PFLU_RS07425	0.80	-0.6
1,653,395	-		PFLU_RS07425	0.80	-0.6
1,653,395	-		PFLU_RS07425	0.80	+1.1
1,653,409	+		PFLU_RS07425	0.81	-1.9
1,653,409	+		PFLU_RS07425	0.81	-0.6
1,653,409	+		PFLU_RS07425	0.81	+0.1
1,653,409	+		PFLU_RS07425	0.81	+0.6
1,653,410	-		PFLU_RS07425	0.81	-0.4
1,653,410	-		PFLU_RS07425	0.81	+0.0
1,653,410	-		PFLU_RS07425	0.81	+0.2
1,653,410	-		PFLU_RS07425	0.81	+0.5
1,653,410	-		PFLU_RS07425	0.81	-0.6
1,653,472	+		PFLU_RS07425	0.88	-1.7
1,653,472	+		PFLU_RS07425	0.88	-0.8
1,653,472	+		PFLU_RS07425	0.88	+0.9
1,653,472	+		PFLU_RS07425	0.88	+0.4
1,653,472	+		PFLU_RS07425	0.88	-0.7
1,653,473	-		PFLU_RS07425	0.88	-0.2
1,653,473	-		PFLU_RS07425	0.88	-1.5
1,653,473	-		PFLU_RS07425	0.88	-0.4
1,653,473	-		PFLU_RS07425	0.88	-0.4
1,653,473	-		PFLU_RS07425	0.88	+0.4
1,653,473	-		PFLU_RS07425	0.88	+1.1
1,653,473	-		PFLU_RS07425	0.88	-1.3
1,653,473	-		PFLU_RS07425	0.88	+0.5
1,653,473	-		PFLU_RS07425	0.88	+0.3
1,653,473	-		PFLU_RS07425	0.88	+0.1
1,653,481	+		PFLU_RS07425	0.89	+0.1
1,653,481	+		PFLU_RS07425	0.89	-2.5
1,653,482	-		PFLU_RS07425	0.89	+0.5
1,653,578	-				+0.3
1,653,578	-				+0.9
1,653,587	+				-0.1
1,653,587	+				-0.7
1,653,587	+				-0.0
1,653,587	+				+1.3
1,653,587	+				-0.9
1,653,587	+				-0.6
1,653,587	+				+0.5
1,653,587	+				+1.7
1,653,588	-				-1.7
1,653,588	-				+0.5
1,653,588	-				-0.1
1,653,588	-				-0.3
1,653,588	-				+1.9
1,653,588	-				-0.6
1,653,588	-				+0.1
1,653,588	-				+0.1
1,653,588	-				+0.5
1,653,635	+				+1.1
1,653,635	+				+1.7
1,653,635	+				-0.7
1,653,635	+				-0.5
1,653,635	+				+0.6
1,653,635	+				-1.5
1,653,635	+				-0.5
1,653,635	+				+0.4
1,653,636	-				+0.2
1,653,636	-				+0.6
1,653,636	-				-2.4
1,653,636	-				-1.4
1,653,636	-				+1.1
1,653,642	+				-0.3
1,653,643	-				+1.3
1,653,643	-				+1.5
1,653,656	+				-1.1
1,653,656	+				+0.5
1,653,656	+				+0.7
1,653,657	-				-2.7
1,653,657	-				+2.4
1,653,657	-				+1.1
1,653,657	-				+0.7
1,653,688	+				-1.4
1,653,688	+				-1.0
1,653,688	+				+2.1
1,653,688	+				+1.2
1,653,688	+				-1.8
1,653,688	+				-0.1
1,653,688	+				+0.2
1,653,689	-				-0.1
1,653,689	-				+0.0
1,653,689	-				+1.5
1,653,701	+				-1.7
1,653,701	+				+0.5
1,653,702	-				-0.6
1,653,702	-				-2.2
1,653,702	-				-0.6
1,653,743	+				+1.2
1,653,744	-				-0.4
1,653,744	-				-0.3
1,653,829	+				-2.2
1,654,010	-		PFLU_RS07430	0.12	+0.6
1,654,043	+		PFLU_RS07430	0.16	-2.0
1,654,043	+		PFLU_RS07430	0.16	+1.7
1,654,043	+		PFLU_RS07430	0.16	+1.1
1,654,043	+		PFLU_RS07430	0.16	-1.2
1,654,043	+		PFLU_RS07430	0.16	-2.7
1,654,044	-		PFLU_RS07430	0.16	+1.3
1,654,044	-		PFLU_RS07430	0.16	-0.8
1,654,044	-		PFLU_RS07430	0.16	-0.2
1,654,230	-		PFLU_RS07430	0.37	+2.0
1,654,349	+		PFLU_RS07430	0.51	-1.3
1,654,350	-		PFLU_RS07430	0.51	-0.6
1,654,350	-		PFLU_RS07430	0.51	-0.0
1,654,350	-		PFLU_RS07430	0.51	-0.3
1,654,385	+		PFLU_RS07430	0.55	-2.0
1,654,385	+		PFLU_RS07430	0.55	+1.4
1,654,426	+		PFLU_RS07430	0.60	+0.1
1,654,426	+		PFLU_RS07430	0.60	+0.7
1,654,426	+		PFLU_RS07430	0.60	-1.1
1,654,496	+		PFLU_RS07430	0.68	+1.0
1,654,497	-		PFLU_RS07430	0.68	+0.3
1,654,549	+		PFLU_RS07430	0.74	-1.5
1,654,549	+		PFLU_RS07430	0.74	+1.2
1,654,549	+		PFLU_RS07430	0.74	+0.3
1,654,550	-		PFLU_RS07430	0.74	-1.4
1,654,550	-		PFLU_RS07430	0.74	-0.6
1,654,622	+		PFLU_RS07430	0.82	+0.6
1,654,622	+		PFLU_RS07430	0.82	+0.3
1,654,622	+		PFLU_RS07430	0.82	-0.6
1,654,622	+		PFLU_RS07430	0.82	+0.9
1,654,622	+		PFLU_RS07430	0.82	+2.1
1,654,622	+		PFLU_RS07430	0.82	-1.1
1,654,622	+		PFLU_RS07430	0.82	-2.3
1,654,622	+		PFLU_RS07430	0.82	-2.1
1,654,622	+		PFLU_RS07430	0.82	+0.9
1,654,622	+		PFLU_RS07430	0.82	-1.0
1,654,623	-		PFLU_RS07430	0.82	-0.4
1,654,623	-		PFLU_RS07430	0.82	+1.4
1,654,623	-		PFLU_RS07430	0.82	-0.4
1,654,623	-		PFLU_RS07430	0.82	+0.5
1,654,623	-		PFLU_RS07430	0.82	+1.0
1,654,623	-		PFLU_RS07430	0.82	-1.7
1,654,623	-		PFLU_RS07430	0.82	+0.8
1,654,623	-		PFLU_RS07430	0.82	-0.1
1,654,623	-		PFLU_RS07430	0.82	+0.1
1,654,623	-		PFLU_RS07430	0.82	+0.2
1,654,673	+		PFLU_RS07430	0.88	+0.4
1,654,674	-		PFLU_RS07430	0.88	-1.4
1,654,745	+				+0.2
1,654,745	+				-0.0
1,654,746	-				-1.2
1,654,865	+				+1.0
1,654,865	+				+0.9
1,654,865	+				-1.9
1,654,865	+				-0.5
1,654,865	+				-0.3
1,654,865	+				+0.8
1,654,865	+				+0.4
1,654,865	+				+1.7
1,654,865	+				+0.4
1,654,865	+				+1.6
1,654,865	+				-0.2
1,654,865	+				-0.0
1,654,865	+				-0.5
1,654,865	+				-0.1
1,654,865	+				+0.1
1,654,865	+				+0.9
1,654,865	+				-0.5
1,654,865	+				+0.1
1,654,865	+				+0.9
1,654,865	+				+0.8
1,654,865	+				-0.6
1,654,865	+				+0.6
1,654,865	+				+0.5
1,654,865	+				+0.4
1,654,865	+				-0.9
1,654,866	-				-2.4
1,654,866	-				-2.2
1,654,866	-				+0.7
1,654,866	-				+0.6
1,654,866	-				-1.1
1,654,866	-				-1.1
1,654,866	-				-0.2
1,654,866	-				-0.2
1,654,866	-				-0.5
1,654,866	-				+1.6
1,654,866	-				-2.3
1,654,866	-				+0.4
1,654,866	-				-1.2
1,654,866	-				-0.6
1,654,866	-				-0.1
1,654,866	-				+0.3
1,654,866	-				-1.3
1,654,866	-				-0.8
1,654,866	-				+0.5
1,654,866	-				+0.8
1,654,866	-				+0.7
1,654,866	-				+0.9
1,654,866	-				-1.7
1,654,866	-				-1.4
1,654,866	-				+1.0
1,654,866	-				+0.3
1,654,866	-				+0.7
1,654,896	+				-0.6
1,654,897	-				-0.9
1,654,897	-				-0.1
1,654,897	-				-1.4
1,654,897	-				-0.4
1,654,897	-				-2.9
1,654,897	-				-1.2
1,655,018	+				+0.6
1,655,019	-				-0.7
1,655,060	+				+0.1
1,655,061	-				+0.4
1,655,061	-				-0.6
1,655,080	+		PFLU_RS07435	0.10	-0.1
1,655,080	+		PFLU_RS07435	0.10	-1.4
1,655,080	+		PFLU_RS07435	0.10	+0.2
1,655,081	-		PFLU_RS07435	0.10	-1.9
1,655,081	-		PFLU_RS07435	0.10	-0.9
1,655,108	+		PFLU_RS07435	0.12	+1.1
1,655,108	+		PFLU_RS07435	0.12	-1.9
1,655,160	+		PFLU_RS07435	0.17	+0.3
1,655,160	+		PFLU_RS07435	0.17	-1.3
1,655,161	-		PFLU_RS07435	0.17	+0.8
1,655,161	-		PFLU_RS07435	0.17	+1.1
1,655,161	-		PFLU_RS07435	0.17	-0.5
1,655,161	-		PFLU_RS07435	0.17	+0.5
1,655,217	+		PFLU_RS07435	0.22	-1.4
1,655,217	+		PFLU_RS07435	0.22	-2.5
1,655,218	-		PFLU_RS07435	0.22	+0.2
1,655,266	+		PFLU_RS07435	0.26	+0.4
1,655,267	-		PFLU_RS07435	0.26	-0.9
1,655,332	+		PFLU_RS07435	0.31	+1.2
1,655,428	+		PFLU_RS07435	0.39	-1.9
1,655,428	+		PFLU_RS07435	0.39	-0.9
1,655,428	+		PFLU_RS07435	0.39	+0.1
1,655,429	-		PFLU_RS07435	0.39	-0.9
1,655,509	+		PFLU_RS07435	0.46	-0.9
1,655,510	-		PFLU_RS07435	0.46	-0.6
1,655,510	-		PFLU_RS07435	0.46	-0.6
1,655,510	-		PFLU_RS07435	0.46	+0.8
1,655,541	+		PFLU_RS07435	0.49	-1.5
1,655,541	+		PFLU_RS07435	0.49	-0.3
1,655,569	+		PFLU_RS07435	0.51	-0.7
1,655,569	+		PFLU_RS07435	0.51	-2.4
1,655,569	+		PFLU_RS07435	0.51	+0.1
1,655,570	-		PFLU_RS07435	0.51	-0.0
1,655,629	+		PFLU_RS07435	0.56	+1.3
1,655,630	-		PFLU_RS07435	0.56	-0.3
1,655,632	+		PFLU_RS07435	0.56	+0.7
1,655,633	+		PFLU_RS07435	0.56	+0.3
1,655,633	-		PFLU_RS07435	0.56	+0.8
1,655,633	-		PFLU_RS07435	0.56	-0.0
1,655,633	-		PFLU_RS07435	0.56	+0.2
1,655,633	-		PFLU_RS07435	0.56	+0.3
1,655,633	-		PFLU_RS07435	0.56	-1.5
1,655,633	-		PFLU_RS07435	0.56	+0.5
1,655,633	-		PFLU_RS07435	0.56	+0.1
1,655,633	-		PFLU_RS07435	0.56	+1.2
1,655,633	-		PFLU_RS07435	0.56	-0.1