Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS05200

Experiment: L-Arabinose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C); with MOPS
1,157,685	+				+0.5
1,157,685	+				-0.4
1,157,685	+				+0.1
1,157,686	-				+0.4
1,157,686	-				-0.1
1,157,731	+		PFLU_RS05195	0.14	-0.2
1,157,731	+		PFLU_RS05195	0.14	-1.3
1,157,768	+		PFLU_RS05195	0.18	-1.1
1,157,768	+		PFLU_RS05195	0.18	+0.0
1,157,769	-		PFLU_RS05195	0.18	-0.3
1,157,815	+		PFLU_RS05195	0.22	-0.8
1,157,815	+		PFLU_RS05195	0.22	-0.0
1,157,820	+		PFLU_RS05195	0.23	-1.1
1,157,820	+		PFLU_RS05195	0.23	-0.9
1,157,821	-		PFLU_RS05195	0.23	+1.0
1,157,821	-		PFLU_RS05195	0.23	+1.2
1,157,959	+		PFLU_RS05195	0.37	-0.5
1,157,959	+		PFLU_RS05195	0.37	-0.7
1,157,959	+		PFLU_RS05195	0.37	-1.6
1,157,959	+		PFLU_RS05195	0.37	-0.3
1,157,959	+		PFLU_RS05195	0.37	+0.3
1,157,959	+		PFLU_RS05195	0.37	-0.3
1,157,959	+		PFLU_RS05195	0.37	+0.8
1,157,959	+		PFLU_RS05195	0.37	+0.9
1,157,960	-		PFLU_RS05195	0.37	-0.0
1,157,960	-		PFLU_RS05195	0.37	-0.6
1,157,960	-		PFLU_RS05195	0.37	+0.1
1,157,960	-		PFLU_RS05195	0.37	-0.0
1,157,960	-		PFLU_RS05195	0.37	-0.6
1,157,960	-		PFLU_RS05195	0.37	-3.5
1,157,960	-		PFLU_RS05195	0.37	+1.3
1,157,960	-		PFLU_RS05195	0.37	+1.4
1,157,960	-		PFLU_RS05195	0.37	-0.7
1,158,069	+		PFLU_RS05195	0.48	+0.5
1,158,206	+		PFLU_RS05195	0.62	+0.1
1,158,289	+		PFLU_RS05195	0.71	-1.0
1,158,290	-		PFLU_RS05195	0.71	+0.3
1,158,290	-		PFLU_RS05195	0.71	-0.6
1,158,290	-		PFLU_RS05195	0.71	+0.5
1,158,367	+		PFLU_RS05195	0.79	+0.1
1,158,367	+		PFLU_RS05195	0.79	-0.3
1,158,367	+		PFLU_RS05195	0.79	-0.3
1,158,367	+		PFLU_RS05195	0.79	+0.2
1,158,367	+		PFLU_RS05195	0.79	-0.1
1,158,367	+		PFLU_RS05195	0.79	+1.7
1,158,367	+		PFLU_RS05195	0.79	+0.1
1,158,367	+		PFLU_RS05195	0.79	+0.6
1,158,367	+		PFLU_RS05195	0.79	-0.8
1,158,368	-		PFLU_RS05195	0.79	-0.8
1,158,368	-		PFLU_RS05195	0.79	+1.0
1,158,368	-		PFLU_RS05195	0.79	+0.6
1,158,370	+		PFLU_RS05195	0.79	+0.4
1,158,370	+		PFLU_RS05195	0.79	-1.0
1,158,370	+		PFLU_RS05195	0.79	-0.3
1,158,370	+		PFLU_RS05195	0.79	+1.0
1,158,370	+		PFLU_RS05195	0.79	-2.2
1,158,371	-		PFLU_RS05195	0.79	+0.4
1,158,371	-		PFLU_RS05195	0.79	-0.1
1,158,371	-		PFLU_RS05195	0.79	+0.3
1,158,371	-		PFLU_RS05195	0.79	-0.2
1,158,371	-		PFLU_RS05195	0.79	+0.8
1,158,371	-		PFLU_RS05195	0.79	-0.5
1,158,371	-		PFLU_RS05195	0.79	+0.4
1,158,412	+		PFLU_RS05195	0.83	+0.5
1,158,412	+		PFLU_RS05195	0.83	-1.9
1,158,413	-		PFLU_RS05195	0.84	+0.6
1,158,413	-		PFLU_RS05195	0.84	-0.4
1,158,413	-		PFLU_RS05195	0.84	-0.3
1,158,415	+		PFLU_RS05195	0.84	+0.1
1,158,416	-		PFLU_RS05195	0.84	+0.9
1,158,416	-		PFLU_RS05195	0.84	-0.4
1,158,575	+				+0.9
1,158,575	+				+0.0
1,158,575	+				-0.8
1,158,575	+				-0.7
1,158,576	-				+0.7
1,158,576	-				-0.0
1,158,576	-				+0.9
1,158,576	-				+0.4
1,158,576	-				-0.6
1,158,576	-				-1.1
1,158,576	-				-0.2
1,158,576	-				+1.9
1,158,576	-				-1.3
1,158,608	+				+1.4
1,158,672	-		PFLU_RS05200	0.28	-2.1
1,158,672	-		PFLU_RS05200	0.28	-0.5
1,158,716	+		PFLU_RS05200	0.40	-0.7
1,158,717	-		PFLU_RS05200	0.41	+0.3
1,158,761	+		PFLU_RS05200	0.53	+0.5
1,158,782	+		PFLU_RS05200	0.59	+0.9
1,158,782	+		PFLU_RS05200	0.59	+0.5
1,158,782	+		PFLU_RS05200	0.59	-0.2
1,159,088	+		PFLU_RS05205	0.16	-0.3
1,159,089	-		PFLU_RS05205	0.16	+0.2
1,159,124	-		PFLU_RS05205	0.20	-0.4
1,159,124	-		PFLU_RS05205	0.20	-1.4
1,159,124	-		PFLU_RS05205	0.20	-0.2
1,159,140	-		PFLU_RS05205	0.21	-1.7
1,159,147	+		PFLU_RS05205	0.22	+0.2
1,159,147	+		PFLU_RS05205	0.22	-1.1
1,159,147	+		PFLU_RS05205	0.22	-0.4
1,159,147	+		PFLU_RS05205	0.22	+0.6
1,159,147	+		PFLU_RS05205	0.22	-1.3
1,159,148	-		PFLU_RS05205	0.22	+0.6
1,159,148	-		PFLU_RS05205	0.22	+0.1
1,159,148	-		PFLU_RS05205	0.22	+0.5
1,159,148	-		PFLU_RS05205	0.22	-1.4
1,159,148	-		PFLU_RS05205	0.22	+0.2
1,159,148	-		PFLU_RS05205	0.22	+0.8
1,159,148	-		PFLU_RS05205	0.22	+1.4
1,159,234	+		PFLU_RS05205	0.31	+0.9
1,159,234	+		PFLU_RS05205	0.31	-1.5
1,159,378	+		PFLU_RS05205	0.45	+0.2
1,159,423	+		PFLU_RS05205	0.50	-0.6
1,159,423	+		PFLU_RS05205	0.50	-0.7
1,159,423	+		PFLU_RS05205	0.50	-0.6
1,159,423	+		PFLU_RS05205	0.50	+1.8
1,159,424	-		PFLU_RS05205	0.50	+0.6
1,159,424	-		PFLU_RS05205	0.50	-0.2
1,159,424	-		PFLU_RS05205	0.50	+1.7
1,159,424	-		PFLU_RS05205	0.50	-0.1
1,159,424	-		PFLU_RS05205	0.50	-1.8
1,159,424	-		PFLU_RS05205	0.50	-2.3
1,159,576	+		PFLU_RS05205	0.65	+0.2
1,159,577	-		PFLU_RS05205	0.65	+0.8
1,159,577	-		PFLU_RS05205	0.65	+0.4
1,159,711	+		PFLU_RS05205	0.78	+0.2
1,159,711	+		PFLU_RS05205	0.78	-0.4
1,159,711	+		PFLU_RS05205	0.78	+0.3
1,159,711	+		PFLU_RS05205	0.78	-1.3
1,159,711	+		PFLU_RS05205	0.78	-1.1
1,159,712	-		PFLU_RS05205	0.78	-0.9
1,159,712	-		PFLU_RS05205	0.78	+1.3
1,159,712	-		PFLU_RS05205	0.78	+0.5
1,159,792	+		PFLU_RS05205	0.86	+3.7
1,159,792	+		PFLU_RS05205	0.86	-0.7
1,159,792	+		PFLU_RS05205	0.86	+1.6
1,159,792	+		PFLU_RS05205	0.86	-1.7
1,159,792	+		PFLU_RS05205	0.86	+1.6
1,159,793	-		PFLU_RS05205	0.86	-1.7
1,159,793	-		PFLU_RS05205	0.86	-2.1
1,159,793	-		PFLU_RS05205	0.86	+0.9
1,159,793	-		PFLU_RS05205	0.86	-1.7
1,159,793	-		PFLU_RS05205	0.86	+0.7
1,159,793	-		PFLU_RS05205	0.86	-0.8
1,159,793	-		PFLU_RS05205	0.86	-0.8