Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS01350

Experiment: L-Arabinose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C); with MOPS
299,903	-				+0.6
299,903	-				+0.3
299,913	-				+0.9
299,913	-				-0.9
299,913	-				-0.3
299,920	+				-0.4
299,920	+				+0.0
299,920	+				-0.3
299,920	+				-1.5
299,921	-				-0.6
299,921	-				-0.7
299,921	-				+0.9
299,921	-				-2.0
299,921	-				+1.1
299,924	+				-0.5
299,924	+				-1.0
299,924	+				-0.1
299,924	+				+1.3
299,924	+				-2.4
299,925	-				+0.7
299,925	-				-1.3
299,925	-				+2.0
299,925	-				+0.5
299,970	+				+0.6
299,971	-				+1.2
299,971	-				-2.2
299,971	-				+0.2
300,016	+				+2.0
300,064	+		PFLU_RS01345	0.15	+0.9
300,064	+		PFLU_RS01345	0.15	+0.0
300,064	+		PFLU_RS01345	0.15	-0.1
300,064	+		PFLU_RS01345	0.15	+0.4
300,064	+		PFLU_RS01345	0.15	+1.2
300,122	+		PFLU_RS01345	0.22	+0.3
300,122	+		PFLU_RS01345	0.22	-0.9
300,122	+		PFLU_RS01345	0.22	+0.8
300,122	+		PFLU_RS01345	0.22	-1.4
300,122	+		PFLU_RS01345	0.22	-1.2
300,122	+		PFLU_RS01345	0.22	-0.8
300,122	+		PFLU_RS01345	0.22	-1.5
300,122	+		PFLU_RS01345	0.22	+1.4
300,122	+		PFLU_RS01345	0.22	-0.1
300,122	+		PFLU_RS01345	0.22	+0.5
300,122	+		PFLU_RS01345	0.22	+0.7
300,122	+		PFLU_RS01345	0.22	-2.5
300,122	+		PFLU_RS01345	0.22	+0.2
300,123	-		PFLU_RS01345	0.22	-0.7
300,123	-		PFLU_RS01345	0.22	+1.1
300,123	-		PFLU_RS01345	0.22	-0.9
300,123	-		PFLU_RS01345	0.22	+0.6
300,123	-		PFLU_RS01345	0.22	+0.1
300,123	-		PFLU_RS01345	0.22	+0.6
300,123	-		PFLU_RS01345	0.22	-1.4
300,123	-		PFLU_RS01345	0.22	-0.2
300,123	-		PFLU_RS01345	0.22	+0.6
300,123	-		PFLU_RS01345	0.22	-0.3
300,123	-		PFLU_RS01345	0.22	+0.4
300,160	+		PFLU_RS01345	0.26	-1.3
300,160	+		PFLU_RS01345	0.26	+0.8
300,161	-		PFLU_RS01345	0.26	+0.4
300,161	-		PFLU_RS01345	0.26	+0.8
300,161	-		PFLU_RS01345	0.26	-2.8
300,260	+		PFLU_RS01345	0.38	+1.2
300,260	+		PFLU_RS01345	0.38	-0.6
300,260	+		PFLU_RS01345	0.38	-0.1
300,260	+		PFLU_RS01345	0.38	-1.6
300,260	+		PFLU_RS01345	0.38	-1.8
300,260	+		PFLU_RS01345	0.38	+0.4
300,260	+		PFLU_RS01345	0.38	+0.6
300,260	+		PFLU_RS01345	0.38	+0.3
300,260	+		PFLU_RS01345	0.38	+1.1
300,260	+		PFLU_RS01345	0.38	+1.2
300,260	+		PFLU_RS01345	0.38	+0.1
300,260	+		PFLU_RS01345	0.38	+0.1
300,261	-		PFLU_RS01345	0.38	-0.6
300,261	-		PFLU_RS01345	0.38	+1.4
300,261	-		PFLU_RS01345	0.38	-0.8
300,261	-		PFLU_RS01345	0.38	+1.0
300,261	-		PFLU_RS01345	0.38	+0.3
300,261	-		PFLU_RS01345	0.38	+2.0
300,261	-		PFLU_RS01345	0.38	+0.4
300,261	-		PFLU_RS01345	0.38	+0.6
300,261	-		PFLU_RS01345	0.38	-0.4
300,261	-		PFLU_RS01345	0.38	+0.2
300,261	-		PFLU_RS01345	0.38	-0.0
300,261	-		PFLU_RS01345	0.38	-1.6
300,261	-		PFLU_RS01345	0.38	+1.3
300,261	-		PFLU_RS01345	0.38	+1.1
300,292	+		PFLU_RS01345	0.42	+1.9
300,292	+		PFLU_RS01345	0.42	+1.1
300,292	+		PFLU_RS01345	0.42	+0.2
300,293	-		PFLU_RS01345	0.42	+0.6
300,346	+		PFLU_RS01345	0.48	+0.5
300,347	-		PFLU_RS01345	0.48	+0.6
300,356	+		PFLU_RS01345	0.49	+1.2
300,356	+		PFLU_RS01345	0.49	-0.2
300,356	+		PFLU_RS01345	0.49	-2.6
300,357	-		PFLU_RS01345	0.49	+0.4
300,357	-		PFLU_RS01345	0.49	+0.9
300,395	+		PFLU_RS01345	0.54	-0.1
300,395	+		PFLU_RS01345	0.54	+1.1
300,395	+		PFLU_RS01345	0.54	+0.1
300,396	-		PFLU_RS01345	0.54	+0.8
300,396	-		PFLU_RS01345	0.54	-0.4
300,399	+		PFLU_RS01345	0.54	+0.9
300,399	+		PFLU_RS01345	0.54	+0.3
300,399	+		PFLU_RS01345	0.54	-1.1
300,399	+		PFLU_RS01345	0.54	-1.4
300,399	+		PFLU_RS01345	0.54	+0.3
300,399	+		PFLU_RS01345	0.54	-1.4
300,399	+		PFLU_RS01345	0.54	-0.4
300,399	+		PFLU_RS01345	0.54	+1.5
300,399	+		PFLU_RS01345	0.54	+0.5
300,400	-		PFLU_RS01345	0.54	-1.5
300,400	-		PFLU_RS01345	0.54	+0.5
300,400	-		PFLU_RS01345	0.54	+0.2
300,400	-		PFLU_RS01345	0.54	+1.7
300,400	-		PFLU_RS01345	0.54	+0.5
300,400	-		PFLU_RS01345	0.54	+1.0
300,400	-		PFLU_RS01345	0.54	-0.8
300,400	-		PFLU_RS01345	0.54	+0.9
300,429	-		PFLU_RS01345	0.58	+1.7
300,442	+		PFLU_RS01345	0.59	+1.3
300,454	+		PFLU_RS01345	0.61	+0.4
300,455	-		PFLU_RS01345	0.61	-3.1
300,520	+		PFLU_RS01345	0.68	+0.3
300,521	-		PFLU_RS01345	0.68	+0.1
300,521	-		PFLU_RS01345	0.68	-0.9
300,599	+		PFLU_RS01345	0.78	+0.4
300,600	-		PFLU_RS01345	0.78	+0.0
300,638	+		PFLU_RS01345	0.82	+0.6
300,638	+		PFLU_RS01345	0.82	+0.3
300,638	+		PFLU_RS01345	0.82	+0.6
300,639	-		PFLU_RS01345	0.82	-0.0
300,658	+		PFLU_RS01345	0.84	-0.2
300,658	+		PFLU_RS01345	0.84	-0.1
300,659	-		PFLU_RS01345	0.85	+0.2
300,686	+		PFLU_RS01345	0.88	+0.1
300,686	+		PFLU_RS01345	0.88	+0.7
300,686	+		PFLU_RS01345	0.88	+1.0
300,686	+		PFLU_RS01345	0.88	+0.8
300,686	+		PFLU_RS01345	0.88	+0.1
300,686	+		PFLU_RS01345	0.88	-0.5
300,686	+		PFLU_RS01345	0.88	+0.9
300,686	+		PFLU_RS01345	0.88	+0.5
300,686	+		PFLU_RS01345	0.88	-0.7
300,686	+		PFLU_RS01345	0.88	+0.6
300,686	+		PFLU_RS01345	0.88	-0.7
300,686	+		PFLU_RS01345	0.88	+0.5
300,686	+		PFLU_RS01345	0.88	+0.5
300,686	+		PFLU_RS01345	0.88	+1.2
300,686	+		PFLU_RS01345	0.88	-0.3
300,686	+		PFLU_RS01345	0.88	+0.9
300,687	-		PFLU_RS01345	0.88	-1.3
300,687	-		PFLU_RS01345	0.88	-0.9
300,687	-		PFLU_RS01345	0.88	-2.1
300,687	-		PFLU_RS01345	0.88	+1.8
300,687	-		PFLU_RS01345	0.88	+2.2
300,687	-		PFLU_RS01345	0.88	+1.9
300,687	-		PFLU_RS01345	0.88	+0.6
300,687	-		PFLU_RS01345	0.88	+0.1
300,687	-		PFLU_RS01345	0.88	-0.9
300,687	-		PFLU_RS01345	0.88	+0.4
300,687	-		PFLU_RS01345	0.88	+1.1
300,687	-		PFLU_RS01345	0.88	+1.8
300,687	-		PFLU_RS01345	0.88	+1.1
300,687	-		PFLU_RS01345	0.88	-0.3
300,687	-		PFLU_RS01345	0.88	+0.6
300,687	-		PFLU_RS01345	0.88	+0.7
300,687	-		PFLU_RS01345	0.88	+0.5
300,687	-		PFLU_RS01345	0.88	-0.6
300,687	-		PFLU_RS01345	0.88	-0.6
300,687	-		PFLU_RS01345	0.88	+0.4
300,687	-		PFLU_RS01345	0.88	-1.2
300,687	-		PFLU_RS01345	0.88	-0.3
300,687	-		PFLU_RS01345	0.88	+0.6
300,687	-		PFLU_RS01345	0.88	+0.1
300,768	+				+0.4
300,768	+				-0.3
300,768	+				+1.2
300,769	-				+0.2
300,769	-				+0.5
300,769	-				+0.9
300,769	-				+0.2
300,769	-				+0.7
300,788	+				+0.5
300,788	+				-1.0
300,788	+				-2.0
300,788	+				+0.8
300,788	+				-1.6
300,788	+				-0.4
300,788	+				-0.5
300,789	-				+0.2
300,789	-				-0.9
300,789	-				+0.9
300,818	+				-1.4
300,819	-				+0.1
300,822	+				+0.4
300,822	+				+1.0
300,822	+				-0.9
300,822	+				+1.2
300,822	+				-1.9
300,823	-				+0.1
300,823	-				+1.0
300,823	-				+0.4
300,823	-				-0.1
300,823	-				-0.6
300,823	-				-0.9
300,823	-				-0.1
300,823	-				+0.2
300,882	+				-0.2
300,930	+		PFLU_RS01350	0.18	+1.8
300,930	+		PFLU_RS01350	0.18	-1.6
300,930	+		PFLU_RS01350	0.18	-0.7
300,930	+		PFLU_RS01350	0.18	+0.6
300,930	+		PFLU_RS01350	0.18	-0.3
300,930	+		PFLU_RS01350	0.18	-0.1
300,930	+		PFLU_RS01350	0.18	+0.6
300,930	+		PFLU_RS01350	0.18	+1.0
300,931	-		PFLU_RS01350	0.18	-0.4
300,931	-		PFLU_RS01350	0.18	+0.5
300,954	+		PFLU_RS01350	0.24	+0.6
300,954	+		PFLU_RS01350	0.24	-0.5
300,954	+		PFLU_RS01350	0.24	-2.9
300,954	+		PFLU_RS01350	0.24	+1.6
300,954	+		PFLU_RS01350	0.24	+0.1
300,954	+		PFLU_RS01350	0.24	+0.0
300,954	+		PFLU_RS01350	0.24	+0.2
300,955	-		PFLU_RS01350	0.24	-0.1
300,955	-		PFLU_RS01350	0.24	+1.6
300,955	-		PFLU_RS01350	0.24	-0.4
300,955	-		PFLU_RS01350	0.24	+0.1
300,955	-		PFLU_RS01350	0.24	-1.0
300,955	-		PFLU_RS01350	0.24	+1.5
300,955	-		PFLU_RS01350	0.24	-0.1
300,955	-		PFLU_RS01350	0.24	-0.6
300,955	-		PFLU_RS01350	0.24	-2.2
300,955	-		PFLU_RS01350	0.24	-3.3
300,957	+		PFLU_RS01350	0.24	+1.0
300,957	+		PFLU_RS01350	0.24	+0.4
300,957	+		PFLU_RS01350	0.24	-0.3
300,957	+		PFLU_RS01350	0.24	+0.2
300,957	+		PFLU_RS01350	0.24	-0.8
300,957	+		PFLU_RS01350	0.24	+0.0
300,957	+		PFLU_RS01350	0.24	+0.6
300,958	-		PFLU_RS01350	0.25	+0.0
300,958	-		PFLU_RS01350	0.25	-0.4
300,958	-		PFLU_RS01350	0.25	+0.7
300,958	-		PFLU_RS01350	0.25	+0.2
300,958	-		PFLU_RS01350	0.25	-0.0
300,958	-		PFLU_RS01350	0.25	-0.1
300,983	+		PFLU_RS01350	0.30	+1.0
300,983	+		PFLU_RS01350	0.30	+0.8
300,983	+		PFLU_RS01350	0.30	-0.8
300,983	+		PFLU_RS01350	0.30	-1.7
300,983	+		PFLU_RS01350	0.30	-0.6
300,983	+		PFLU_RS01350	0.30	+0.6
300,984	-		PFLU_RS01350	0.31	+0.3
300,984	-		PFLU_RS01350	0.31	-1.0
300,984	-		PFLU_RS01350	0.31	-0.8
300,984	-		PFLU_RS01350	0.31	+0.9
300,984	-		PFLU_RS01350	0.31	+0.2
300,984	-		PFLU_RS01350	0.31	-2.4
300,984	-		PFLU_RS01350	0.31	-0.6
300,984	-		PFLU_RS01350	0.31	-1.8
300,987	+		PFLU_RS01350	0.31	-0.3
300,987	+		PFLU_RS01350	0.31	+2.1
300,987	+		PFLU_RS01350	0.31	-2.0
300,987	+		PFLU_RS01350	0.31	-0.2
300,988	-		PFLU_RS01350	0.31	-0.9
300,988	-		PFLU_RS01350	0.31	+0.8
301,062	+		PFLU_RS01350	0.49	-2.5
301,063	-		PFLU_RS01350	0.49	-1.0
301,127	+		PFLU_RS01350	0.64	+0.5
301,127	+		PFLU_RS01350	0.64	+0.0
301,127	+		PFLU_RS01350	0.64	+0.3
301,127	+		PFLU_RS01350	0.64	+0.9
301,128	-		PFLU_RS01350	0.64	-0.9
301,128	-		PFLU_RS01350	0.64	-0.2
301,128	-		PFLU_RS01350	0.64	-0.9
301,128	-		PFLU_RS01350	0.64	-0.2
301,128	-		PFLU_RS01350	0.64	-1.5
301,128	-		PFLU_RS01350	0.64	+0.1
301,128	-		PFLU_RS01350	0.64	-1.7
301,128	-		PFLU_RS01350	0.64	+0.2
301,140	+		PFLU_RS01350	0.67	+0.9
301,140	+		PFLU_RS01350	0.67	-0.6
301,239	-		PFLU_RS01350	0.90	-0.0
301,309	+				+0.6
301,310	-				-0.7
301,495	+				-0.6
301,495	+				-0.6
301,496	-				+0.2
301,496	-				+0.7
301,496	-				-2.2
301,496	-				+1.3
301,519	+				+0.7
301,519	+				+0.4
301,520	-				-1.3
301,520	-				+0.8
301,546	+				+0.3
301,582	+		PFLU_RS01355	0.16	-0.5
301,642	+		PFLU_RS01355	0.28	-0.5
301,642	+		PFLU_RS01355	0.28	-1.9
301,642	+		PFLU_RS01355	0.28	+0.6
301,642	+		PFLU_RS01355	0.28	-1.3
301,642	+		PFLU_RS01355	0.28	+0.0
301,642	+		PFLU_RS01355	0.28	+0.7
301,642	+		PFLU_RS01355	0.28	+1.0
301,642	+		PFLU_RS01355	0.28	+0.4
301,642	+		PFLU_RS01355	0.28	+0.3
301,642	+		PFLU_RS01355	0.28	-0.7
301,642	+		PFLU_RS01355	0.28	-1.7
301,642	+		PFLU_RS01355	0.28	-0.1
301,642	+		PFLU_RS01355	0.28	+1.6
301,642	+		PFLU_RS01355	0.28	+0.8
301,642	+		PFLU_RS01355	0.28	-1.5
301,642	+		PFLU_RS01355	0.28	-1.1
301,642	+		PFLU_RS01355	0.28	-0.4
301,642	+		PFLU_RS01355	0.28	+0.5
301,642	+		PFLU_RS01355	0.28	-0.2
301,642	+		PFLU_RS01355	0.28	-1.2
301,642	+		PFLU_RS01355	0.28	+0.1
301,642	+		PFLU_RS01355	0.28	+1.2
301,642	+		PFLU_RS01355	0.28	-1.3
301,642	+		PFLU_RS01355	0.28	-0.0
301,642	+		PFLU_RS01355	0.28	-0.6
301,643	-		PFLU_RS01355	0.29	-0.8
301,643	-		PFLU_RS01355	0.29	-0.1
301,643	-		PFLU_RS01355	0.29	+1.0
301,643	-		PFLU_RS01355	0.29	+0.9
301,643	-		PFLU_RS01355	0.29	+0.6
301,643	-		PFLU_RS01355	0.29	-0.2
301,643	-		PFLU_RS01355	0.29	-0.3
301,643	-		PFLU_RS01355	0.29	-0.3
301,643	-		PFLU_RS01355	0.29	-1.2
301,643	-		PFLU_RS01355	0.29	-0.4
301,643	-		PFLU_RS01355	0.29	+0.4
301,643	-		PFLU_RS01355	0.29	+0.3
301,643	-		PFLU_RS01355	0.29	-0.7
301,643	-		PFLU_RS01355	0.29	+0.9
301,643	-		PFLU_RS01355	0.29	+0.0
301,643	-		PFLU_RS01355	0.29	-1.5
301,643	-		PFLU_RS01355	0.29	-1.2
301,643	-		PFLU_RS01355	0.29	-0.1
301,643	-		PFLU_RS01355	0.29	-1.0
301,643	-		PFLU_RS01355	0.29	-2.0
301,643	-		PFLU_RS01355	0.29	-1.3
301,716	-		PFLU_RS01355	0.44	-3.3
301,723	-		PFLU_RS01355	0.45	-0.0
301,985	+				+0.6
301,986	-				-1.6
301,986	-				+0.1
302,043	+				+0.6
302,043	+				+0.0
302,044	-				-1.3
302,070	+				-1.3
302,133	+				+1.8
302,133	+				-1.8
302,134	-				+0.4
302,154	-				-0.6
302,154	-				+0.7
302,255	+				-0.1
302,255	+				+0.2