Strain Fitness in Pseudomonas sp. S08-1 around OH686_22685

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
4,602,887	-		OH686_22675	0.87	-0.9
4,603,075	+				-2.2
4,603,075	+				-2.2
4,603,075	+				-0.5
4,603,075	+				-1.3
4,603,075	+				-2.0
4,603,075	+				-0.2
4,603,075	+				-2.4
4,603,075	+				-0.2
4,603,076	-				-0.2
4,603,076	-				-1.5
4,603,076	-				-1.6
4,603,076	-				-2.2
4,603,076	-				-1.8
4,603,076	-				-2.2
4,603,076	-				-1.7
4,603,076	-				-3.0
4,603,391	+		OH686_22680	0.50	-0.3
4,603,391	+		OH686_22680	0.50	-0.2
4,603,391	+		OH686_22680	0.50	-1.7
4,603,391	+		OH686_22680	0.50	-0.4
4,603,391	+		OH686_22680	0.50	-1.5
4,603,391	+		OH686_22680	0.50	-0.2
4,603,391	+		OH686_22680	0.50	-0.6
4,603,391	+		OH686_22680	0.50	-0.5
4,603,391	+		OH686_22680	0.50	-1.3
4,603,392	-		OH686_22680	0.50	-3.0
4,603,392	-		OH686_22680	0.50	-1.9
4,603,392	-		OH686_22680	0.50	-0.4
4,603,392	-		OH686_22680	0.50	-1.7
4,603,392	-		OH686_22680	0.50	-1.6
4,603,392	-		OH686_22680	0.50	-1.0
4,603,438	+		OH686_22680	0.57	-0.5
4,603,438	+		OH686_22680	0.57	-2.1
4,603,439	-		OH686_22680	0.57	-0.8
4,603,497	-		OH686_22680	0.65	-0.2
4,603,687	+				-0.4
4,603,688	-				-2.2
4,603,688	-				-2.1
4,603,730	+				+0.8
4,603,731	-				-0.1
4,603,731	-				-0.6
4,603,731	-				+0.5
4,603,760	+				-1.0
4,603,760	+				+1.3
4,603,760	+				+0.1
4,603,760	+				-0.2
4,603,760	+				-0.0
4,603,761	-				-0.8
4,603,761	-				-3.5
4,603,761	-				-0.0
4,603,761	-				+0.8
4,603,762	+				-1.1
4,603,762	+				-1.5
4,603,762	+				+0.7
4,603,762	+				+0.3
4,603,762	+				+0.3
4,603,762	+				+0.2
4,603,762	+				+1.2
4,603,762	+				-0.6
4,603,762	+				-0.0
4,603,762	+				+1.1
4,603,763	-				-1.0
4,603,763	-				-0.8
4,603,804	+				-1.3
4,603,804	+				-0.2
4,603,804	+				-0.7
4,603,804	+				-1.7
4,603,804	+				+0.0
4,603,804	+				-1.1
4,603,804	+				+1.1
4,603,804	+				+1.0
4,603,804	+				-1.0
4,603,804	+				+0.1
4,603,804	+				-1.5
4,603,804	+				-0.9
4,603,804	+				-0.0
4,603,804	+				-0.8
4,603,804	+				-0.6
4,603,804	+				-0.1
4,603,804	+				-1.5
4,603,804	+				-1.9
4,603,804	+				-1.9
4,603,805	-				-1.7
4,603,805	-				-1.6
4,603,805	-				-1.9
4,603,805	-				-2.5
4,603,805	-				-1.5
4,603,805	-				-1.7
4,603,805	-				-0.3
4,603,805	-				-2.0
4,603,805	-				-1.1
4,603,805	-				-2.0
4,603,805	-				-0.2
4,603,805	-				-3.0
4,603,821	+				-0.2
4,603,841	+				+0.3
4,603,842	-				+0.1
4,603,842	-				-1.6
4,603,854	+				+0.4
4,603,854	+				+0.5
4,603,854	+				+0.5
4,603,855	-				-0.2
4,603,855	-				+0.3
4,603,855	-				-0.2
4,603,956	-		OH686_22685	0.15	-2.3
4,604,009	+		OH686_22685	0.25	-1.1
4,604,009	+		OH686_22685	0.25	+0.2
4,604,009	+		OH686_22685	0.25	-0.7
4,604,010	-		OH686_22685	0.25	-1.4
4,604,010	-		OH686_22685	0.25	-2.3
4,604,010	-		OH686_22685	0.25	-1.4
4,604,013	+		OH686_22685	0.26	-0.4
4,604,013	+		OH686_22685	0.26	-0.3
4,604,013	+		OH686_22685	0.26	+0.0
4,604,013	+		OH686_22685	0.26	-0.2
4,604,013	+		OH686_22685	0.26	-2.7
4,604,013	+		OH686_22685	0.26	-0.6
4,604,013	+		OH686_22685	0.26	-0.9
4,604,013	+		OH686_22685	0.26	-0.1
4,604,013	+		OH686_22685	0.26	-1.4
4,604,013	+		OH686_22685	0.26	-0.7
4,604,013	+		OH686_22685	0.26	-1.2
4,604,013	+		OH686_22685	0.26	-1.1
4,604,013	+		OH686_22685	0.26	-2.0
4,604,013	+		OH686_22685	0.26	-0.2
4,604,014	-		OH686_22685	0.26	-2.0
4,604,014	-		OH686_22685	0.26	-0.8
4,604,014	-		OH686_22685	0.26	-2.1
4,604,014	-		OH686_22685	0.26	+0.2
4,604,014	-		OH686_22685	0.26	-1.0
4,604,014	-		OH686_22685	0.26	-0.4
4,604,014	-		OH686_22685	0.26	-1.6
4,604,014	-		OH686_22685	0.26	-0.8
4,604,014	-		OH686_22685	0.26	-0.5
4,604,014	-		OH686_22685	0.26	-0.5
4,604,014	-		OH686_22685	0.26	-0.9
4,604,016	+		OH686_22685	0.26	-1.2
4,604,016	+		OH686_22685	0.26	-0.2
4,604,016	+		OH686_22685	0.26	+1.0
4,604,016	+		OH686_22685	0.26	-1.1
4,604,016	+		OH686_22685	0.26	+0.2
4,604,017	-		OH686_22685	0.26	-2.5
4,604,017	-		OH686_22685	0.26	-2.6
4,604,017	-		OH686_22685	0.26	-0.3
4,604,017	-		OH686_22685	0.26	+0.9
4,604,017	-		OH686_22685	0.26	-1.7
4,604,017	-		OH686_22685	0.26	-0.2
4,604,279	+		OH686_22685	0.75	-0.7
4,604,280	-		OH686_22685	0.75	-1.0
4,604,373	+				-2.6
4,604,373	+				+0.6
4,604,373	+				-0.6
4,604,374	-				-3.0
4,604,374	-				-2.9
4,604,472	-				-0.5
4,604,654	+		OH686_22690	0.14	-2.3
4,604,654	+		OH686_22690	0.14	-0.9
4,604,654	+		OH686_22690	0.14	-0.5
4,604,654	+		OH686_22690	0.14	-1.7
4,604,655	-		OH686_22690	0.14	-1.6
4,604,655	-		OH686_22690	0.14	-0.8
4,604,657	-		OH686_22690	0.14	-0.6
4,604,717	+		OH686_22690	0.18	-0.8
4,604,718	-		OH686_22690	0.18	-1.0
4,604,718	-		OH686_22690	0.18	-1.5
4,604,718	-		OH686_22690	0.18	-0.6
4,604,718	-		OH686_22690	0.18	-0.2
4,604,747	+		OH686_22690	0.20	-0.8
4,604,747	+		OH686_22690	0.20	-1.3
4,604,747	+		OH686_22690	0.20	-0.7
4,604,747	+		OH686_22690	0.20	-1.1
4,604,748	-		OH686_22690	0.20	-2.4
4,604,748	-		OH686_22690	0.20	-2.0
4,604,748	-		OH686_22690	0.20	-0.3
4,604,748	-		OH686_22690	0.20	-1.5
4,604,748	-		OH686_22690	0.20	-2.7
4,604,748	-		OH686_22690	0.20	-2.3
4,604,748	-		OH686_22690	0.20	-2.3
4,604,748	-		OH686_22690	0.20	-2.0
4,604,748	-		OH686_22690	0.20	-3.0
4,604,748	-		OH686_22690	0.20	-0.7
4,604,748	-		OH686_22690	0.20	-0.7
4,604,849	+		OH686_22690	0.26	-2.5
4,604,849	+		OH686_22690	0.26	-0.0
4,604,850	-		OH686_22690	0.26	-1.1
4,604,850	-		OH686_22690	0.26	-0.8
4,604,850	-		OH686_22690	0.26	+0.6
4,604,924	+		OH686_22690	0.30	-2.5
4,604,924	+		OH686_22690	0.30	-2.5
4,604,924	+		OH686_22690	0.30	-1.7
4,604,924	+		OH686_22690	0.30	+0.2
4,604,925	-		OH686_22690	0.30	-1.3
4,604,925	-		OH686_22690	0.30	-1.3
4,604,925	-		OH686_22690	0.30	-1.7
4,604,925	-		OH686_22690	0.30	-0.7
4,604,927	+		OH686_22690	0.30	-2.9
4,604,927	+		OH686_22690	0.30	-1.0
4,604,927	+		OH686_22690	0.30	-0.2
4,604,927	+		OH686_22690	0.30	-0.7
4,604,927	+		OH686_22690	0.30	-1.3
4,604,927	+		OH686_22690	0.30	-0.8
4,604,928	-		OH686_22690	0.30	-1.5
4,604,928	-		OH686_22690	0.30	-3.5
4,604,928	-		OH686_22690	0.30	-0.7
4,604,928	-		OH686_22690	0.30	-0.9
4,604,928	-		OH686_22690	0.30	-2.9
4,604,928	-		OH686_22690	0.30	-1.0
4,604,928	-		OH686_22690	0.30	-0.6
4,605,167	+		OH686_22690	0.44	-0.1
4,605,167	+		OH686_22690	0.44	-1.5
4,605,167	+		OH686_22690	0.44	-0.9
4,605,167	+		OH686_22690	0.44	-0.0
4,605,167	+		OH686_22690	0.44	-1.8
4,605,167	+		OH686_22690	0.44	-0.8
4,605,167	+		OH686_22690	0.44	-0.6
4,605,168	-		OH686_22690	0.44	-0.6
4,605,168	-		OH686_22690	0.44	-1.8
4,605,168	-		OH686_22690	0.44	+0.4
4,605,168	-		OH686_22690	0.44	-2.3
4,605,257	-		OH686_22690	0.49	-2.3
4,605,275	+		OH686_22690	0.50	-1.0
4,605,275	+		OH686_22690	0.50	-1.3
4,605,276	-		OH686_22690	0.50	-1.2
4,605,276	-		OH686_22690	0.50	-1.4
4,605,311	+		OH686_22690	0.53	-1.0
4,605,312	-		OH686_22690	0.53	-1.0
4,605,312	-		OH686_22690	0.53	-1.3
4,605,380	-		OH686_22690	0.57	-0.4