Strain Fitness in Pseudomonas sp. S08-1 around OH686_22675

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
4,600,898	+		OH686_22670	0.73	-0.1
4,600,898	+		OH686_22670	0.73	-0.0
4,600,898	+		OH686_22670	0.73	-0.7
4,600,898	+		OH686_22670	0.73	+0.0
4,600,899	-		OH686_22670	0.73	-0.0
4,600,961	+		OH686_22670	0.75	+0.8
4,600,961	+		OH686_22670	0.75	-0.3
4,600,961	+		OH686_22670	0.75	-0.8
4,600,961	+		OH686_22670	0.75	+0.6
4,600,961	+		OH686_22670	0.75	+0.4
4,600,962	-		OH686_22670	0.75	+1.1
4,600,962	-		OH686_22670	0.75	-1.0
4,601,097	-		OH686_22670	0.79	-1.0
4,601,171	+		OH686_22670	0.82	+0.4
4,601,172	-		OH686_22670	0.82	-1.5
4,601,214	+		OH686_22670	0.83	-1.2
4,601,214	+		OH686_22670	0.83	-0.5
4,601,214	+		OH686_22670	0.83	-0.1
4,601,215	-		OH686_22670	0.83	-0.3
4,601,229	+		OH686_22670	0.84	-0.1
4,601,229	+		OH686_22670	0.84	-0.2
4,601,229	+		OH686_22670	0.84	+1.5
4,601,230	-		OH686_22670	0.84	-0.1
4,601,372	+		OH686_22670	0.88	-2.8
4,601,372	+		OH686_22670	0.88	+1.0
4,601,372	+		OH686_22670	0.88	-0.2
4,601,372	+		OH686_22670	0.88	+0.6
4,601,372	+		OH686_22670	0.88	+0.9
4,601,372	+		OH686_22670	0.88	-1.0
4,601,372	+		OH686_22670	0.88	-0.1
4,601,373	-		OH686_22670	0.88	-0.5
4,601,373	-		OH686_22670	0.88	-0.1
4,601,373	-		OH686_22670	0.88	+0.7
4,601,373	-		OH686_22670	0.88	+0.0
4,601,373	-		OH686_22670	0.88	+1.1
4,601,373	-		OH686_22670	0.88	+0.3
4,601,373	-		OH686_22670	0.88	-0.2
4,601,373	-		OH686_22670	0.88	+0.0
4,601,373	-		OH686_22670	0.88	+1.4
4,601,499	+				+1.0
4,601,500	-				+0.2
4,601,613	+				+0.3
4,601,614	-				-0.6
4,601,614	-				-0.4
4,601,614	-				+1.3
4,601,614	-				-0.2
4,601,614	-				-0.2
4,601,669	+				+1.8
4,601,669	+				+0.2
4,601,669	+				+0.0
4,601,669	+				+0.4
4,601,670	-				-0.4
4,601,670	-				+0.0
4,601,676	+				-0.4
4,601,676	+				-0.7
4,601,677	-				-0.4
4,601,730	-				-0.2
4,601,730	-				+0.2
4,601,882	+		OH686_22675	0.12	-2.7
4,602,119	+		OH686_22675	0.29	-2.3
4,602,120	-		OH686_22675	0.30	-1.3
4,602,120	-		OH686_22675	0.30	-0.8
4,602,120	-		OH686_22675	0.30	-2.6
4,602,273	-		OH686_22675	0.41	-1.2
4,602,439	+		OH686_22675	0.54	-1.5
4,602,439	+		OH686_22675	0.54	-2.8
4,602,439	+		OH686_22675	0.54	-3.1
4,602,439	+		OH686_22675	0.54	-1.2
4,602,439	+		OH686_22675	0.54	-0.7
4,602,439	+		OH686_22675	0.54	-2.1
4,602,439	+		OH686_22675	0.54	-0.9
4,602,439	+		OH686_22675	0.54	-0.9
4,602,439	+		OH686_22675	0.54	-1.4
4,602,439	+		OH686_22675	0.54	-1.9
4,602,439	+		OH686_22675	0.54	-0.9
4,602,439	+		OH686_22675	0.54	-2.7
4,602,440	-		OH686_22675	0.54	-1.6
4,602,440	-		OH686_22675	0.54	-0.2
4,602,440	-		OH686_22675	0.54	-2.0
4,602,440	-		OH686_22675	0.54	-2.0
4,602,440	-		OH686_22675	0.54	-2.4
4,602,440	-		OH686_22675	0.54	-1.1
4,602,440	-		OH686_22675	0.54	-1.1
4,602,440	-		OH686_22675	0.54	-1.8
4,602,440	-		OH686_22675	0.54	-0.7
4,602,440	-		OH686_22675	0.54	-0.6
4,602,440	-		OH686_22675	0.54	+0.1
4,602,440	-		OH686_22675	0.54	-2.3
4,602,440	-		OH686_22675	0.54	-0.5
4,602,440	-		OH686_22675	0.54	-2.4
4,602,494	-		OH686_22675	0.58	-1.3
4,602,646	-		OH686_22675	0.69	-0.0
4,602,887	-		OH686_22675	0.87	-0.9
4,603,075	+				-2.2
4,603,075	+				-2.2
4,603,075	+				-0.5
4,603,075	+				-1.3
4,603,075	+				-2.0
4,603,075	+				-0.2
4,603,075	+				-2.4
4,603,075	+				-0.2
4,603,076	-				-0.2
4,603,076	-				-1.5
4,603,076	-				-1.6
4,603,076	-				-2.2
4,603,076	-				-1.8
4,603,076	-				-2.2
4,603,076	-				-1.7
4,603,076	-				-3.0
4,603,391	+		OH686_22680	0.50	-0.3
4,603,391	+		OH686_22680	0.50	-0.2
4,603,391	+		OH686_22680	0.50	-1.7
4,603,391	+		OH686_22680	0.50	-0.4
4,603,391	+		OH686_22680	0.50	-1.5
4,603,391	+		OH686_22680	0.50	-0.2
4,603,391	+		OH686_22680	0.50	-0.6
4,603,391	+		OH686_22680	0.50	-0.5
4,603,391	+		OH686_22680	0.50	-1.3
4,603,392	-		OH686_22680	0.50	-3.0
4,603,392	-		OH686_22680	0.50	-1.9
4,603,392	-		OH686_22680	0.50	-0.4
4,603,392	-		OH686_22680	0.50	-1.7
4,603,392	-		OH686_22680	0.50	-1.6
4,603,392	-		OH686_22680	0.50	-1.0
4,603,438	+		OH686_22680	0.57	-0.5
4,603,438	+		OH686_22680	0.57	-2.1
4,603,439	-		OH686_22680	0.57	-0.8
4,603,497	-		OH686_22680	0.65	-0.2
4,603,687	+				-0.4
4,603,688	-				-2.2
4,603,688	-				-2.1
4,603,730	+				+0.8
4,603,731	-				-0.1
4,603,731	-				-0.6
4,603,731	-				+0.5
4,603,760	+				-1.0
4,603,760	+				+1.3
4,603,760	+				+0.1
4,603,760	+				-0.2
4,603,760	+				-0.0
4,603,761	-				-0.8
4,603,761	-				-3.5
4,603,761	-				-0.0
4,603,761	-				+0.8
4,603,762	+				-1.1
4,603,762	+				-1.5
4,603,762	+				+0.7
4,603,762	+				+0.3
4,603,762	+				+0.3
4,603,762	+				+0.2
4,603,762	+				+1.2
4,603,762	+				-0.6
4,603,762	+				-0.0
4,603,762	+				+1.1
4,603,763	-				-1.0
4,603,763	-				-0.8
4,603,804	+				-1.3
4,603,804	+				-0.2
4,603,804	+				-0.7
4,603,804	+				-1.7
4,603,804	+				+0.0
4,603,804	+				-1.1
4,603,804	+				+1.1
4,603,804	+				+1.0
4,603,804	+				-1.0
4,603,804	+				+0.1
4,603,804	+				-1.5
4,603,804	+				-0.9
4,603,804	+				-0.0
4,603,804	+				-0.8
4,603,804	+				-0.6
4,603,804	+				-0.1
4,603,804	+				-1.5
4,603,804	+				-1.9
4,603,804	+				-1.9
4,603,805	-				-1.7
4,603,805	-				-1.6
4,603,805	-				-1.9
4,603,805	-				-2.5
4,603,805	-				-1.5
4,603,805	-				-1.7
4,603,805	-				-0.3
4,603,805	-				-2.0
4,603,805	-				-1.1
4,603,805	-				-2.0
4,603,805	-				-0.2
4,603,805	-				-3.0
4,603,821	+				-0.2
4,603,841	+				+0.3
4,603,842	-				+0.1
4,603,842	-				-1.6
4,603,854	+				+0.4
4,603,854	+				+0.5
4,603,854	+				+0.5
4,603,855	-				-0.2
4,603,855	-				+0.3
4,603,855	-				-0.2
4,603,956	-		OH686_22685	0.15	-2.3
4,604,009	+		OH686_22685	0.25	-1.1
4,604,009	+		OH686_22685	0.25	+0.2
4,604,009	+		OH686_22685	0.25	-0.7
4,604,010	-		OH686_22685	0.25	-1.4
4,604,010	-		OH686_22685	0.25	-2.3
4,604,010	-		OH686_22685	0.25	-1.4
4,604,013	+		OH686_22685	0.26	-0.4
4,604,013	+		OH686_22685	0.26	-0.3
4,604,013	+		OH686_22685	0.26	+0.0
4,604,013	+		OH686_22685	0.26	-0.2
4,604,013	+		OH686_22685	0.26	-2.7
4,604,013	+		OH686_22685	0.26	-0.6
4,604,013	+		OH686_22685	0.26	-0.9
4,604,013	+		OH686_22685	0.26	-0.1
4,604,013	+		OH686_22685	0.26	-1.4
4,604,013	+		OH686_22685	0.26	-0.7
4,604,013	+		OH686_22685	0.26	-1.2
4,604,013	+		OH686_22685	0.26	-1.1
4,604,013	+		OH686_22685	0.26	-2.0
4,604,013	+		OH686_22685	0.26	-0.2
4,604,014	-		OH686_22685	0.26	-2.0
4,604,014	-		OH686_22685	0.26	-0.8
4,604,014	-		OH686_22685	0.26	-2.1
4,604,014	-		OH686_22685	0.26	+0.2
4,604,014	-		OH686_22685	0.26	-1.0
4,604,014	-		OH686_22685	0.26	-0.4
4,604,014	-		OH686_22685	0.26	-1.6
4,604,014	-		OH686_22685	0.26	-0.8
4,604,014	-		OH686_22685	0.26	-0.5
4,604,014	-		OH686_22685	0.26	-0.5
4,604,014	-		OH686_22685	0.26	-0.9
4,604,016	+		OH686_22685	0.26	-1.2
4,604,016	+		OH686_22685	0.26	-0.2
4,604,016	+		OH686_22685	0.26	+1.0
4,604,016	+		OH686_22685	0.26	-1.1
4,604,016	+		OH686_22685	0.26	+0.2
4,604,017	-		OH686_22685	0.26	-2.5
4,604,017	-		OH686_22685	0.26	-2.6
4,604,017	-		OH686_22685	0.26	-0.3
4,604,017	-		OH686_22685	0.26	+0.9
4,604,017	-		OH686_22685	0.26	-1.7
4,604,017	-		OH686_22685	0.26	-0.2